xBASE Logo
About | Contact | Home

Rhodobacterales bacterium HTCC2654, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01012242.1 RB2654_11989 3-oxoacyl-(acyl-carrier-protein) synthase III 20 409 -1
CDS - ZP_01012243.1 RB2654_11994 hypothetical protein 485 991 -1
CDS - ZP_01012244.1 RB2654_11999 thymidine phosphorylase 1069 2373 1
CDS truB ZP_01012245.1 RB2654_12004 tRNA pseudouridine synthase B 2649 3554 -1
CDS - ZP_01012246.1 RB2654_12009 ribosome-binding factor A 3554 3964 -1
CDS - ZP_01012247.1 RB2654_12014 dihydrodipicolinate reductase 4038 4847 1
CDS - ZP_01012248.1 RB2654_12019 regulatory protein, TetR 5044 5604 1
CDS recO ZP_01012249.1 RB2654_12024 DNA repair protein RecO 5592 6332 -1
CDS - ZP_01012250.1 RB2654_12029 hypothetical protein 6398 7012 1
CDS - ZP_01012251.1 RB2654_12034 hypothetical protein 7061 7660 1
CDS - ZP_01012252.1 RB2654_12039 DNA polymerase IV 7673 8926 1
CDS - ZP_01012253.1 RB2654_12044 N-formylglutamate amidohydrolase family protein 8927 9787 -1
tRNA - - RB2654_t13601 tRNA-Val 9935 10006 1
CDS - ZP_01012254.1 RB2654_12049 ribosomal protein L36 10077 10202 1
CDS - ZP_01012255.1 RB2654_12054 hypothetical protein 10315 11961 -1
CDS - ZP_01012256.1 RB2654_12059 phenylacetate-CoA ligase, putative 12080 13300 -1
CDS - ZP_01012257.1 RB2654_12064 hypothetical protein 13449 14252 1
CDS - ZP_01012258.1 RB2654_12069 branched-chain amino acid ABC transporter, ATP-binding protein 14294 15121 -1
CDS - ZP_01012259.1 RB2654_12074 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein, putative 15191 16477 -1
CDS - ZP_01012260.1 RB2654_12079 ABC branched amino acid transporter family, inner membrane subunit 16551 17627 -1
CDS - ZP_01012261.1 RB2654_12084 hypothetical protein 17627 17875 -1
CDS - ZP_01012262.1 RB2654_12089 ABC branched amino acid transporter family, inner membrane subunit 17878 18864 -1
CDS - ZP_01012263.1 RB2654_12094 branched-chain amino acid ABC transporter, ATP-binding protein 18960 19781 -1
CDS - ZP_01012264.1 RB2654_12099 AMP-binding enzyme 19813 21789 -1
CDS - ZP_01012265.1 RB2654_12104 PAS sensor hybrid histidine kinase 22093 23907 1
CDS - ZP_01012266.1 RB2654_12109 two-component trancriptional regulator, winged helix family protein 23904 24608 1
CDS - ZP_01012267.1 RB2654_12114 phosphoglycerate mutase family protein 24666 25316 1
CDS - ZP_01012268.1 RB2654_12119 hypothetical protein 25330 25650 -1
CDS - ZP_01012269.1 RB2654_12124 RmuC domain protein 25711 26943 -1
CDS - ZP_01012270.1 RB2654_12129 DNA mismatch repair protein 26940 28772 -1
CDS - ZP_01012271.1 RB2654_12134 peptidase, M16 family protein 28883 30193 -1
CDS - ZP_01012272.1 RB2654_12139 putative zinc protease 30190 31545 -1
CDS - ZP_01012273.1 RB2654_12144 hypothetical protein 31698 32216 -1
CDS - ZP_01012274.1 RB2654_12149 signal peptidase II 32283 32762 -1
CDS purH ZP_01012275.1 RB2654_12154 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 32762 34351 -1
CDS - ZP_01012276.1 RB2654_12159 hypothetical protein 34367 36100 -1
CDS - ZP_01012277.1 RB2654_12164 ribosomal RNA small subunit methyltransferase B, putative 36193 37455 -1
CDS - ZP_01012278.1 RB2654_12169 hypothetical protein 37521 37700 1
CDS - ZP_01012279.1 RB2654_12174 hypothetical protein 37825 40749 1
CDS - ZP_01012280.1 RB2654_12179 hypothetical protein 40746 41732 -1
CDS - ZP_01012281.1 RB2654_12184 putative sugar nucleotide dehydratase 41737 42708 -1
CDS - ZP_01012282.1 RB2654_12189 Glycosyl transferase, group 1 42777 43916 -1
CDS - ZP_01012283.1 RB2654_12194 hypothetical mannosyltransferase 43913 45046 -1
CDS - ZP_01012284.1 RB2654_12199 hypothetical protein 45043 46197 -1
CDS - ZP_01012285.1 RB2654_12204 probable glycosyl transferase protein 46204 47049 -1
CDS - ZP_01012286.1 RB2654_12209 hypothetical protein 47067 47984 -1
CDS - ZP_01012287.1 RB2654_12214 hypothetical protein 48013 49416 -1
CDS - ZP_01012288.1 RB2654_12219 putative lipopolysaccharide biosynthesis protein 49413 50492 -1
CDS - ZP_01012289.1 RB2654_12224 hypothetical protein 50496 51413 -1
CDS - ZP_01012290.1 RB2654_12229 Glycosyl transferase, group 1 51585 52613 -1
CDS - ZP_01012291.1 RB2654_12234 ATP-binding protein of ABC transporter 52610 54463 -1
CDS - ZP_01012292.1 RB2654_12239 hypothetical protein 54790 56934 1
CDS - ZP_01012293.1 RB2654_12244 glucose-1-phosphate thymidylyltransferase 56941 57813 -1
CDS - ZP_01012294.1 RB2654_12249 hypothetical protein 57810 58676 -1
CDS - ZP_01012295.1 RB2654_12254 dTDP-glucose 4,6-dehydratase 58673 59713 -1
CDS - ZP_01012296.1 RB2654_12259 dTDP-6-deoxy-D-glucose-3,5-epimerase 59710 60276 -1
CDS - ZP_01012297.1 RB2654_12264 dihydrolipoamide dehydrogenase 60459 61859 -1
CDS - ZP_01012298.1 RB2654_12269 hypothetical protein 61956 63293 -1
CDS - ZP_01012299.1 RB2654_12274 hypothetical protein 63476 63922 1
CDS - ZP_01012300.1 RB2654_12279 Ribosomal protein S15 64050 64319 1
CDS - ZP_01012301.1 RB2654_12284 putative cytochrome b-561 transmembrane protein 64354 64914 -1
CDS - ZP_01012302.1 RB2654_12289 hypothetical protein 64916 65485 -1
CDS - ZP_01012303.1 RB2654_12294 polyribonucleotide nucleotidyltransferase 65745 67895 1
CDS - ZP_01012304.1 RB2654_12299 hypothetical protein 67956 68729 -1
CDS - ZP_01012305.1 RB2654_12304 hypothetical protein 68749 69480 -1
CDS - ZP_01012306.1 RB2654_12309 hypothetical protein 69573 70166 -1
CDS - ZP_01012307.1 RB2654_12314 hypothetical protein 70224 70358 -1
CDS - ZP_01012308.1 RB2654_12319 hypothetical protein 70440 70931 -1
CDS - ZP_01012309.1 RB2654_12324 metallo-beta-lactamase family protein 70904 71947 -1
CDS - ZP_01012310.1 RB2654_12329 acyl-CoA dehydrogenase family protein 71944 73659 -1
CDS - ZP_01012311.1 RB2654_12334 Putative translation factor 73758 74711 1
CDS - ZP_01012312.1 RB2654_12339 probable HlyD family secretion protein 74802 75971 -1
CDS - ZP_01012313.1 RB2654_12344 probable ATP-binding/permease fusion ABC transporter 75971 78214 -1
CDS - ZP_01012314.1 RB2654_12349 hypothetical protein 78211 79464 -1
CDS - ZP_01012315.1 RB2654_12354 hypothetical protein 79601 83638 -1
CDS - ZP_01012316.1 RB2654_12359 hypothetical protein 84052 85476 1
CDS - ZP_01012317.1 RB2654_12364 hypothetical protein 85478 86413 1
CDS - ZP_01012318.1 RB2654_12369 hypothetical protein 86473 87222 1
CDS - ZP_01012319.1 RB2654_12374 hypothetical protein 87232 87969 1
CDS - ZP_01012320.1 RB2654_12379 C4-dicarboxylate transport sensor protein 88021 89751 1
CDS - ZP_01012321.1 RB2654_12384 C4-dicarboxylate transport transcriptional regulatory protein 89748 90974 1
CDS - ZP_01012322.1 RB2654_12389 hypothetical protein 90971 93277 -1
CDS - ZP_01012323.1 RB2654_12394 hypothetical protein 93440 94510 -1
CDS - ZP_01012324.1 RB2654_12399 sulfatase family protein 94544 96199 -1
CDS - ZP_01012325.1 RB2654_12404 pca operon transcriptional activator PcaQ 96342 97235 -1
CDS - ZP_01012326.1 RB2654_12409 hypothetical protein 97309 99138 -1
CDS - ZP_01012327.1 RB2654_12414 putative fatty acid oxidation complex alpha subunit 99131 101191 -1
CDS - ZP_01012328.1 RB2654_12419 acetyl-CoA acetyltransferase 101188 102471 -1
CDS - ZP_01012329.1 RB2654_12424 Acyl-CoA dehydrogenase 102468 104708 -1
CDS - ZP_01012330.1 RB2654_12429 TRAP transporter solute receptor, DctP family protein 105066 106076 1
CDS - ZP_01012331.1 RB2654_12434 TRAP transporter, DctQ subunit 106156 106806 1
CDS - ZP_01012332.1 RB2654_12439 TRAP transporter, DctM subunit 106810 108207 1
CDS - ZP_01012333.1 RB2654_12444 ABC transporter, inner membrane subunit 108335 109153 -1
CDS - ZP_01012334.1 RB2654_12449 ABC transporter, ATPase subunit 109153 109926 -1
CDS - ZP_01012335.1 RB2654_12454 ABC transporter, periplasmic substrate binding protein 110000 111004 -1
CDS - ZP_01012336.1 RB2654_12459 putative nitrate reductase, large subunit protein 111167 113794 -1
CDS - ZP_01012337.1 RB2654_12464 putative nitrite reductase [NAD(P)H], small subunit protein 113794 114126 -1
CDS - ZP_01012338.1 RB2654_12469 BFD-like (2Fe-2S)-binding region protein 114123 116555 -1
CDS - ZP_01012339.1 RB2654_12474 probable bacterial hemoglobin 116552 116974 -1
CDS - ZP_01012340.1 RB2654_12479 nitrate transport ATP-binding protein 116980 118686 -1