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Rhodococcus equi ATCC 33707 contig00003, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06827719.1 HMPREF0724_0001 hypothetical protein 92 289 -1
tRNA - - HMPREF0724_t0001 tRNA-Thr 616 688 -1
CDS holB ZP_06827720.1 HMPREF0724_0002 DNA-directed DNA polymerase III subunit delta' 751 1938 -1
CDS topA ZP_06827721.1 HMPREF0724_0003 DNA topoisomerase TopA 1983 4871 -1
CDS - ZP_06827722.1 HMPREF0724_0004 hypothetical protein 5017 5601 -1
CDS cspA1 ZP_06827723.1 HMPREF0724_0005 cold shock protein A 5792 5995 -1
CDS - ZP_06827724.1 HMPREF0724_0006 DEAD/DEAH box family ATP-dependent RNA helicase 6432 8738 1
CDS - ZP_06827725.1 HMPREF0724_0007 hypothetical protein 8744 9064 -1
CDS - ZP_06827726.1 HMPREF0724_0008 hypothetical protein 9115 9471 -1
CDS - ZP_06827727.1 HMPREF0724_0009 hypothetical protein 9468 9671 -1
CDS - ZP_06827728.1 HMPREF0724_0010 bacterial type II secretion system protein F domain protein 9732 10328 -1
CDS - ZP_06827729.1 HMPREF0724_0011 type II secretion system protein 10328 11002 -1
CDS cpaF2 ZP_06827730.1 HMPREF0724_0012 pilus assembly protein CpaF 11131 12309 -1
CDS - ZP_06827731.1 HMPREF0724_0013 hypothetical protein 12306 13424 -1
CDS - ZP_06827732.1 HMPREF0724_0014 HAD-superfamily subfamily IB hydrolase 13823 14641 1
CDS - ZP_06827733.1 HMPREF0724_0015 hypothetical protein 15065 15805 -1
CDS - ZP_06827734.1 HMPREF0724_0016 ABC superfamily ATP binding cassette transporter, ABC protein 15829 17439 -1
CDS oppC2 ZP_06827735.1 HMPREF0724_0017 oligopeptide ABC superfamily ATP binding cassette transporter, permease protein 17436 18278 -1
CDS dppB ZP_06827736.1 HMPREF0724_0018 dipeptide ABC superfamily ATP binding cassette transporter, permease protein 18289 19215 -1
CDS dppA ZP_06827737.1 HMPREF0724_0019 dipeptide ABC superfamily ATP binding cassette transporter, binding protein 19218 20855 -1
CDS - ZP_06827738.1 HMPREF0724_0020 hypothetical protein 20834 21004 -1
CDS acsA ZP_06827739.1 HMPREF0724_0021 acetate-CoA ligase 21110 23038 1
CDS baiE2 ZP_06827740.1 HMPREF0724_0022 possible bile-acid 7-alpha-dehydratase 23124 23639 -1
CDS - ZP_06827741.1 HMPREF0724_0023 ABC amino acid transporter 23675 24850 -1
CDS - ZP_06827742.1 HMPREF0724_0024 short chain dehydrogenase/reductase family oxidoreductase 24922 25794 -1
CDS hapE2 ZP_06827743.1 HMPREF0724_0025 4-hydroxyacetophenone monooxygenase 25859 26788 -1
CDS - ZP_06827744.1 HMPREF0724_0026 hypothetical protein 26772 27281 -1
CDS - ZP_06827745.1 HMPREF0724_0027 short-chain dehydrogenase/reductase SDR 27302 28189 -1
CDS - ZP_06827746.1 HMPREF0724_0028 IclR family transcriptional regulator 28495 29244 1
CDS kshA9 ZP_06827747.1 HMPREF0724_0029 ketosteroid-9-alpha-hydroxylase 29333 30496 1
CDS - ZP_06827748.1 HMPREF0724_0030 pigment production hydroxylase 30525 31706 1
CDS bphC6 ZP_06827749.1 HMPREF0724_0031 2,3-dihydroxybiphenyl 1,2-dioxygenase 31739 32674 1
CDS - ZP_06827750.1 HMPREF0724_0032 TetR family transcriptional regulator 32758 33378 -1
CDS - ZP_06827751.1 HMPREF0724_0033 regulatory protein, IclR 33575 34411 -1
CDS - ZP_06827752.1 HMPREF0724_0034 IclR family transcriptional regulator 34458 35237 -1
CDS - ZP_06827753.1 HMPREF0724_0035 peptide ABC superfamily ATP binding cassette transporter 35505 36500 -1
CDS oppD ZP_06827754.1 HMPREF0724_0036 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 36502 37620 -1
CDS oppC3 ZP_06827755.1 HMPREF0724_0037 oligopeptide ABC superfamily ATP binding cassette transporter, permease protein 37617 38540 -1
CDS - ZP_06827756.1 HMPREF0724_0038 peptide/opine/nickel uptake family ABC superfamily ATP binding cassette transporter 38537 39529 -1
CDS - ZP_06827757.1 HMPREF0724_0039 peptide ABC superfamily ATP binding cassette transporter substrate-binding protein 39532 41082 -1
CDS - ZP_06827758.1 HMPREF0724_0040 glyoxalase 41129 41521 -1
CDS - ZP_06827759.1 HMPREF0724_0041 possible major facilitator transporter 41983 43344 1
CDS - ZP_06827760.1 HMPREF0724_0042 GntR family transcriptional regulator 43346 44026 1
CDS - ZP_06827761.1 HMPREF0724_0043 hypothetical protein 44102 44446 1
CDS - ZP_06827762.1 HMPREF0724_0044 stress responsive A/B Barrel domain protein 44439 45077 1
CDS - ZP_06827763.1 HMPREF0724_0045 possible 4-hydroxyacetophenone monooxygenase 45124 47139 -1
CDS - ZP_06827764.1 HMPREF0724_0046 hypothetical protein 47240 48289 -1
CDS - ZP_06827765.1 HMPREF0724_0047 short-chained dehydrogenase 48439 49215 -1
CDS pamO2 ZP_06827766.1 HMPREF0724_0048 Phenylacetone monooxygenase 49355 51028 -1
CDS adhB6 ZP_06827767.1 HMPREF0724_0049 alcohol dehydrogenase 51189 52298 -1
CDS aldA4 ZP_06827768.1 HMPREF0724_0050 aldehyde dehydrogenase 52295 53758 -1
CDS lipH ZP_06827769.1 HMPREF0724_0051 lipase/esterase 53755 54795 -1
CDS - ZP_06827770.1 HMPREF0724_0052 possible acyl-CoA dehydrogenaseC-terminal domain protein 54779 55885 -1
CDS - ZP_06827771.1 HMPREF0724_0053 acyl-CoA dehydrogenase 55891 57024 -1
CDS - ZP_06827772.1 HMPREF0724_0054 hypothetical protein 57024 57152 1
CDS echA7 ZP_06827773.1 HMPREF0724_0055 enoyl-CoA hydratase/isomerase family protein 57321 58127 1
CDS - ZP_06827774.1 HMPREF0724_0056 III family CAIB/BAIF CoA-transferase 58124 59287 1
CDS - ZP_06827775.1 HMPREF0724_0057 LuxR family transcriptional regulator 59347 61662 1
CDS - ZP_06827776.1 HMPREF0724_0058 hypothetical protein 61816 62178 1
CDS - ZP_06827777.1 HMPREF0724_0059 cna protein B-type domain protein 62266 63003 -1
CDS yhjE ZP_06827778.1 HMPREF0724_0060 MFS family major facilitator metabolite transporter YhjE 63214 64617 -1
CDS nhaA ZP_06827779.1 HMPREF0724_0061 NhaA family sodium:proton (Na+:H+) antiporter 64846 66054 1
CDS - ZP_06827780.1 HMPREF0724_0062 hypothetical protein 66112 66636 1
CDS - ZP_06827781.1 HMPREF0724_0063 alpha/beta hydrolase fold family hydrolase 66657 67592 1
CDS - ZP_06827782.1 HMPREF0724_0064 serine protease 67621 68811 -1
CDS - ZP_06827783.1 HMPREF0724_0065 NTP pyrophosphohydrolase 68808 69581 -1
CDS - ZP_06827784.1 HMPREF0724_0066 thioredoxin 69578 70246 -1
CDS nth ZP_06827785.1 HMPREF0724_0067 endonuclease III 70252 70932 -1
CDS - ZP_06827786.1 HMPREF0724_0068 hypothetical protein 71108 71362 1
CDS - ZP_06827787.1 HMPREF0724_0069 amino acid permease 71437 72783 1
CDS ppx12 ZP_06827788.1 HMPREF0724_0070 exopolyphosphatase 72780 73817 1
CDS ntcA ZP_06827789.1 HMPREF0724_0071 global nitrogen regulator NtcA 74028 74702 1
CDS amq ZP_06827790.1 HMPREF0724_0072 possible arylformamidase 74863 75717 1
CDS - ZP_06827791.1 HMPREF0724_0073 LysR family transcriptional regulator 75818 76750 1
CDS - ZP_06827792.1 HMPREF0724_0074 metabolite-proton symporter 76813 78156 -1
CDS agmT ZP_06827793.1 HMPREF0724_0075 hypothetical protein 78153 78278 -1
CDS acmsd ZP_06827794.1 HMPREF0724_0076 possible aminocarboxymuconate-semialdehyde decarboxylase 78328 79323 -1
CDS nbaC ZP_06827795.1 HMPREF0724_0077 3-hydroxyanthranilate 3,4-dioxygenase 79325 79846 -1
CDS - ZP_06827796.1 HMPREF0724_0078 2-aminomuconate deaminase 79843 80301 -1
CDS - ZP_06827797.1 HMPREF0724_0079 4-oxalocrotonate decarboxylase 80298 81077 -1
CDS cnbD ZP_06827798.1 HMPREF0724_0080 2-amino-5-chloromuconic semialdehyde dehydrogenase 81098 82573 -1
CDS - ZP_06827799.1 HMPREF0724_0081 TetR family transcriptional regulatory protein 82679 83491 -1
CDS - ZP_06827800.1 HMPREF0724_0082 probable helicase 83552 85309 1
CDS - ZP_06827801.1 HMPREF0724_0083 hypothetical protein 85306 85875 1
CDS - ZP_06827802.1 HMPREF0724_0084 metallo-beta-lactamase 85910 86695 -1
CDS gdh3 ZP_06827803.1 HMPREF0724_0085 glucose 1-dehydrogenase 86822 87586 -1
CDS - ZP_06827804.1 HMPREF0724_0086 TetR family transcriptional regulator 87717 88367 1
CDS - ZP_06827805.1 HMPREF0724_0087 endoribonuclease L-PSP family protein 88415 88885 -1
CDS - ZP_06827806.1 HMPREF0724_0088 hypothetical protein 88891 89055 -1
CDS - ZP_06827807.1 HMPREF0724_0089 arsenite-transporting ATPase 89111 90151 1
CDS - ZP_06827808.1 HMPREF0724_0090 ion-transporting ATPase 90148 91287 1
CDS - ZP_06827809.1 HMPREF0724_0091 transcription factor WhiB 91401 91712 -1
CDS - ZP_06827810.1 HMPREF0724_0092 hypothetical protein 91707 91832 1
CDS pon ZP_06827811.1 HMPREF0724_0093 penicillin-binding protein 1 92021 94342 1
CDS - ZP_06827812.1 HMPREF0724_0094 hypothetical protein 94436 94591 1
CDS - ZP_06827813.1 HMPREF0724_0095 hypothetical protein 94675 95316 1
CDS yhbO ZP_06827814.1 HMPREF0724_0096 intracellular protease YhbO 95313 95876 1
CDS - ZP_06827815.1 HMPREF0724_0097 hypothetical protein 95880 96587 -1
CDS - ZP_06827816.1 HMPREF0724_0098 YqeY family protein 96638 97114 -1
CDS - ZP_06827817.1 HMPREF0724_0099 Ser/Thr protein phosphatase 97179 98159 1