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Rhodococcus equi ATCC 33707 contig00005, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaX ZP_06827964.1 HMPREF0724_0246 DNA polymerase III, gamma/tau subunit DnaX 1 1317 -1
CDS - ZP_06827965.1 HMPREF0724_0247 hypothetical protein 1369 1545 -1
CDS amt5 ZP_06827966.1 HMPREF0724_0248 AMT family ammonium or ammonia transporter 1546 2856 1
CDS - ZP_06827967.1 HMPREF0724_0249 fatty acid desaturase 3403 4773 1
CDS cspA2 ZP_06827968.1 HMPREF0724_0250 cold shock protein CspA 5339 5542 1
CDS - ZP_06827969.1 HMPREF0724_0251 fis family two component 5686 5922 -1
CDS - ZP_06827970.1 HMPREF0724_0252 glyoxalase 5938 6087 1
CDS fucA ZP_06827971.1 HMPREF0724_0253 possible L-fuculose-phosphate aldolase 6100 6759 -1
CDS - ZP_06827972.1 HMPREF0724_0254 PfkB family kinase 6756 7718 -1
CDS - ZP_06827973.1 HMPREF0724_0255 polyketide cyclase/dehydrase superfamily protein 7715 8221 -1
CDS aofH ZP_06827974.1 HMPREF0724_0256 amine oxidase 8218 9612 -1
CDS - ZP_06827975.1 HMPREF0724_0257 tetR-family transcriptional regulatory protein 9832 10368 1
CDS - ZP_06827976.1 HMPREF0724_0258 hypothetical protein 10419 11366 -1
CDS - ZP_06827977.1 HMPREF0724_0259 twin-arginine translocation pathway signal 11376 12365 -1
CDS - ZP_06827978.1 HMPREF0724_0260 glyoxalase 12499 12897 1
CDS ftsW3 ZP_06827979.1 HMPREF0724_0261 cell division protein FtsW 12994 14424 1
CDS - ZP_06827980.1 HMPREF0724_0262 glyoxalase 14393 14866 -1
CDS - ZP_06827981.1 HMPREF0724_0263 hypothetical protein 14863 15702 -1
CDS - ZP_06827982.1 HMPREF0724_0264 HhH-GPD family protein 15837 16421 -1
CDS - ZP_06827983.1 HMPREF0724_0265 hypothetical protein 16468 17796 -1
CDS - ZP_06827984.1 HMPREF0724_0266 enterochelin esterase 17883 19043 -1
CDS - ZP_06827985.1 HMPREF0724_0267 ferrienterobactin-binding periplasmic protein 19115 20146 1
CDS aspB ZP_06827986.1 HMPREF0724_0268 aspartate aminotransferase 20219 21511 -1
tRNA - - HMPREF0724_t0003 tRNA-Ser 21746 21833 1
CDS - ZP_06827987.1 HMPREF0724_0269 short chain dehydrogenase/reductase family oxidoreductase 22017 22937 1
CDS fabG31 ZP_06827988.1 HMPREF0724_0270 3-oxoacyl-[acyl-carrier-protein] reductase 22972 23769 1
CDS - ZP_06827989.1 HMPREF0724_0271 possible lipoprotein 23779 24273 -1
CDS - ZP_06827990.1 HMPREF0724_0272 AraC family transcriptional regulator 24328 25167 1
CDS ctaD4 ZP_06827991.1 HMPREF0724_0273 cytochrome c oxidase, subunit I 25745 27544 -1
CDS gltX2 ZP_06827992.1 HMPREF0724_0274 glutamate--tRNA ligase 27749 28663 1
CDS - ZP_06827993.1 HMPREF0724_0275 YjbE family integral membrane protein 29119 29766 1
CDS - ZP_06827994.1 HMPREF0724_0276 hypothetical protein 29888 30640 1
CDS tgt ZP_06827995.1 HMPREF0724_0277 tRNA-guanine transglycosylase 30607 31860 -1
CDS - ZP_06827996.1 HMPREF0724_0278 methyltransferase 31917 32696 -1
CDS - ZP_06827997.1 HMPREF0724_0279 integral membrane protein 32944 33744 1
CDS - ZP_06827998.1 HMPREF0724_0280 hypothetical protein 33787 34224 -1
CDS - ZP_06827999.1 HMPREF0724_0281 hypothetical protein 34275 34625 1
CDS - ZP_06828000.1 HMPREF0724_0282 ATP/GTP-binding protein 34638 35099 -1
CDS gcdH ZP_06828001.1 HMPREF0724_0283 glutaryl-CoA dehydrogenase 35158 36321 -1
CDS mdlB ZP_06828002.1 HMPREF0724_0284 multidrug ABC superfamily ATP binding cassette transporter, ABC protein 36323 38221 -1
CDS - ZP_06828003.1 HMPREF0724_0285 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 38248 39981 -1
CDS - ZP_06828004.1 HMPREF0724_0286 RND superfamily resistance-nodulation-cell division:proton (H+) antiporter 40082 42415 -1
CDS - ZP_06828005.1 HMPREF0724_0287 transcriptional regulator 42444 43043 -1
CDS - ZP_06828006.1 HMPREF0724_0288 trans-aconitate 2-methyltransferase 43206 43970 1
CDS - ZP_06828007.1 HMPREF0724_0289 Rrf2 family transcriptional regulator 43978 44436 -1
CDS - ZP_06828008.1 HMPREF0724_0290 C-5 sterol desaturase 44556 45518 1
CDS - ZP_06828009.1 HMPREF0724_0291 hypothetical protein 45450 46133 -1
CDS - ZP_06828010.1 HMPREF0724_0292 hypothetical protein 46172 46663 -1
CDS - ZP_06828011.1 HMPREF0724_0293 probable transcriptional regulator 46682 47743 -1
CDS pimH ZP_06828012.1 HMPREF0724_0294 major facilitator family transporter 47777 49108 -1
CDS - ZP_06828013.1 HMPREF0724_0295 MarR family transcriptional regulator 49105 49599 -1
CDS - ZP_06828014.1 HMPREF0724_0296 hypothetical protein 49709 50530 -1
CDS lsr2 ZP_06828015.1 HMPREF0724_0297 Lsr2 protein 50534 50869 -1
CDS - ZP_06828016.1 HMPREF0724_0298 NERD domain containing protein 50945 51823 -1
CDS - ZP_06828017.1 HMPREF0724_0299 hypothetical protein 51773 51955 1
CDS - ZP_06828018.1 HMPREF0724_0300 hypothetical protein 52182 52436 -1
CDS - ZP_06828019.1 HMPREF0724_0301 integral membrane protein 52433 52849 -1
CDS rbn3 ZP_06828020.1 HMPREF0724_0302 tRNA processing ribonuclease BN 52842 53930 -1
CDS - ZP_06828021.1 HMPREF0724_0303 possible glycosyltransferase 53975 54850 -1
CDS - ZP_06828022.1 HMPREF0724_0304 HAD-superfamily hydrolase 54916 55587 -1
CDS - ZP_06828023.1 HMPREF0724_0305 hypothetical protein 55602 57005 -1
CDS - ZP_06828024.1 HMPREF0724_0306 transcriptional regulator 57023 57643 -1
CDS - ZP_06828025.1 HMPREF0724_0307 mini-circle protein 57740 58237 1
CDS - ZP_06828026.1 HMPREF0724_0308 protein of hypothetical function DUF336 58258 58674 -1
CDS - ZP_06828027.1 HMPREF0724_0309 flavin binding monooxygenase 58712 60496 -1
CDS limC3 ZP_06828028.1 HMPREF0724_0310 carveol dehydrogenase 60513 61355 -1
tRNA - - HMPREF0724_t0004 tRNA-Ser 61845 61935 -1
CDS - ZP_06828029.1 HMPREF0724_0311 hypothetical protein 61987 62184 -1
CDS - ZP_06828030.1 HMPREF0724_0312 cytidine and deoxycytidylate deaminase 62330 62788 -1
CDS - ZP_06828031.1 HMPREF0724_0313 hypothetical protein 62805 63344 -1
CDS tyrA2 ZP_06828032.1 HMPREF0724_0314 prephenate dehydrogenase 63394 64359 1
CDS - ZP_06828033.1 HMPREF0724_0315 possible amidase 64356 65702 1
CDS - ZP_06828034.1 HMPREF0724_0316 hypothetical protein 65836 66351 -1
CDS - ZP_06828035.1 HMPREF0724_0317 hypothetical protein 66489 67553 -1
CDS clpC2 ZP_06828036.1 HMPREF0724_0318 ATP-dependent Clp protease 67708 70188 1
CDS - ZP_06828037.1 HMPREF0724_0319 transcriptional regulatory protein PadR 70241 71140 -1
CDS - ZP_06828038.1 HMPREF0724_0320 DNA (cytosine-5-)-methyltransferase 71233 72429 1
CDS vsr ZP_06828039.1 HMPREF0724_0321 DNA mismatch endonuclease Vsr 72443 72856 1
CDS - ZP_06828040.1 HMPREF0724_0322 dTDP-glucose 4,6-dehydratase 72921 73751 1
CDS - ZP_06828041.1 HMPREF0724_0323 LuxR family DNA-binding response regulator 73778 74443 -1
CDS - ZP_06828042.1 HMPREF0724_0324 integral membrane sensor sensor histidine kinase 74440 75645 -1
CDS - ZP_06828043.1 HMPREF0724_0325 abortive infection protein 75642 76514 -1
CDS glpQ2 ZP_06828044.1 HMPREF0724_0326 glycerophosphodiester phosphodiesterase 76700 77800 1
CDS - ZP_06828045.1 HMPREF0724_0327 thiopurine S-methyltransferase family protein 78001 78762 1
CDS - ZP_06828046.1 HMPREF0724_0328 hypothetical protein 78759 79655 1
CDS paaI2 ZP_06828047.1 HMPREF0724_0329 thioesterase 79652 80077 1
CDS - ZP_06828048.1 HMPREF0724_0330 short-chain dehydrogenase/reductase SDR 80093 80971 -1
CDS serA2 ZP_06828049.1 HMPREF0724_0331 D-isomer specific 2-hydroxyacid dehydrogenase 81062 81994 -1
CDS - ZP_06828050.1 HMPREF0724_0332 hypothetical protein 82004 82195 -1
CDS - ZP_06828051.1 HMPREF0724_0333 CBS domain protein 82226 83596 1
CDS - ZP_06828052.1 HMPREF0724_0334 CBS domain protein 83589 84605 1
CDS xdhC ZP_06828053.1 HMPREF0724_0335 xanthine dehydrogenase Fe-S binding subunit 84691 85209 1
CDS kdpA2 ZP_06828054.1 HMPREF0724_0336 potassium-transporting ATPase subunit A 85206 86198 1
CDS xdhA ZP_06828055.1 HMPREF0724_0337 aldehyde oxidase and xanthine dehydrogenase 86195 88297 1
CDS dppB2 ZP_06828056.1 HMPREF0724_0338 dipeptide ABC superfamily ATP binding cassette transporter, permease protein 88440 88592 1
CDS - ZP_06828057.1 HMPREF0724_0339 hypothetical protein 88721 88846 1
CDS - ZP_06828058.1 HMPREF0724_0340 twin-arginine translocation pathway signal 89084 90541 1
CDS - ZP_06828059.1 HMPREF0724_0341 hypothetical protein 90776 90949 1
CDS htrB2 ZP_06828060.1 HMPREF0724_0342 lipid A biosynthesis lauroyl acyltransferase 90990 91871 -1
tRNA - - HMPREF0724_t0005 tRNA-Arg 92026 92098 -1