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Rhodococcus equi ATCC 33707 contig00009, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS ribD2 ZP_06828460.1 HMPREF0724_0742 riboflavin biosynthesis protein RibD 1 130 -1
CDS rpe ZP_06828461.1 HMPREF0724_0743 ribulose-phosphate 3-epimerase 141 812 -1
CDS map3 ZP_06828462.1 HMPREF0724_0744 maltose phosphorylase 835 3354 -1
CDS adhA2 ZP_06828463.1 HMPREF0724_0745 zinc-binding dehydrogenase 3284 4336 -1
CDS xfp ZP_06828464.1 HMPREF0724_0746 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 4565 6955 1
CDS - ZP_06828465.1 HMPREF0724_0747 group 2 glycosyl transferase 7019 7837 1
CDS - ZP_06828466.1 HMPREF0724_0748 acyl-CoA dehydrogenase 7834 8781 1
CDS - ZP_06828467.1 HMPREF0724_0749 LmbE family protein 8778 9557 1
CDS - ZP_06828468.1 HMPREF0724_0750 methyltransferase 9554 10165 1
CDS - ZP_06828469.1 HMPREF0724_0751 integral membrane protein 10239 10499 1
CDS sun ZP_06828470.1 HMPREF0724_0752 RNA methyltransferase Sun 10522 12009 -1
CDS fmt2 ZP_06828471.1 HMPREF0724_0753 methionyl-tRNA formyltransferase 12006 12929 -1
CDS - ZP_06828472.1 HMPREF0724_0754 membrane-spanning protein 13037 14791 -1
CDS - ZP_06828473.1 HMPREF0724_0755 hypothetical protein 14897 15115 1
CDS - ZP_06828474.1 HMPREF0724_0756 triacylglycerol lipase 15136 16239 -1
CDS corA2 ZP_06828475.1 HMPREF0724_0757 MIT family metal ion transporter CorA 16312 17328 1
CDS - ZP_06828476.1 HMPREF0724_0758 EthD protein 17396 17743 1
CDS priA ZP_06828477.1 HMPREF0724_0759 DNA replication factor Y 17740 19713 -1
CDS metK ZP_06828478.1 HMPREF0724_0760 methionine adenosyltransferase 19784 20995 -1
CDS coaBC ZP_06828479.1 HMPREF0724_0761 coenzyme A biosynthesis bifunctional protein CoaBC 21167 22453 -1
CDS rpoZ ZP_06828480.1 HMPREF0724_0762 DNA-directed RNA polymerase subunit omega 22468 22752 -1
CDS gmk ZP_06828481.1 HMPREF0724_0763 guanylate kinase 22840 23364 -1
CDS - ZP_06828482.1 HMPREF0724_0764 integration host factor MihF 23485 23805 -1
CDS pyrF ZP_06828483.1 HMPREF0724_0765 orotidine 5'-phosphate decarboxylase 24282 25118 -1
CDS carB ZP_06828484.1 HMPREF0724_0766 carbamoyl-phosphate synthase, large subunit 25115 28462 -1
CDS carA ZP_06828485.1 HMPREF0724_0767 carbamoyl-phosphate synthase, small subunit 28462 29622 -1
CDS - ZP_06828486.1 HMPREF0724_0768 integral membrane protein 29619 30161 -1
CDS pyrC ZP_06828487.1 HMPREF0724_0769 dihydroorotase 30164 31543 -1
CDS pyrB ZP_06828488.1 HMPREF0724_0770 aspartate carbamoyltransferase, catalytic subunit 31540 32481 -1
CDS pyrR ZP_06828489.1 HMPREF0724_0771 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase 32478 33110 -1
CDS nusB ZP_06828490.1 HMPREF0724_0772 transcription antitermination factor NusB 33305 33808 -1
CDS efp ZP_06828491.1 HMPREF0724_0773 elongation factor P 33809 34372 -1
CDS yqhT ZP_06828492.1 HMPREF0724_0774 xaa-Pro dipeptidase 34389 35507 -1
CDS - ZP_06828493.1 HMPREF0724_0775 hypothetical protein 35610 36248 1
CDS aroQ ZP_06828494.1 HMPREF0724_0776 3-dehydroquinate dehydratase 36349 36777 -1
CDS aroB ZP_06828495.1 HMPREF0724_0777 3-dehydroquinate synthase 36774 37883 -1
CDS aroK2 ZP_06828496.1 HMPREF0724_0778 shikimate kinase 37888 38442 -1
CDS aroC ZP_06828497.1 HMPREF0724_0779 chorismate synthase 38447 39643 -1
CDS aroE3 ZP_06828498.1 HMPREF0724_0780 shikimate-5-dehydrogenase 39746 40579 -1
CDS - ZP_06828499.1 HMPREF0724_0781 aminodeoxychorismate lyase 40576 42027 -1
CDS - ZP_06828500.1 HMPREF0724_0782 Holliday junction resolvase family protein 42024 42476 -1
CDS alaS ZP_06828501.1 HMPREF0724_0783 alanine--tRNA ligase 42587 45259 -1
CDS - ZP_06828502.1 HMPREF0724_0784 AAA family ATPase 45411 46817 -1
CDS - ZP_06828503.1 HMPREF0724_0785 TetR family transcriptional regulator 46863 47516 -1
CDS tauD6 ZP_06828504.1 HMPREF0724_0786 TauD/TfdA family dioxygenase 47711 48517 1
CDS tauD7 ZP_06828505.1 HMPREF0724_0787 possible taurine dioxygenase 48561 49526 1
CDS atsA3 ZP_06828506.1 HMPREF0724_0788 arylsulfatase 49748 52078 1
CDS - ZP_06828507.1 HMPREF0724_0789 peptide ABC superfamily ATP binding cassette transporter 52267 53841 1
CDS - ZP_06828508.1 HMPREF0724_0790 oligopeptide ABC superfamily ATP binding cassette transporter 53848 54807 1
CDS dppC2 ZP_06828509.1 HMPREF0724_0791 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 54804 55670 1
CDS dppD3 ZP_06828510.1 HMPREF0724_0792 dipeptide ABC superfamily ATP binding cassette transporter, ABC protein 55692 57326 1
CDS - ZP_06828511.1 HMPREF0724_0793 hypothetical protein 57382 57540 -1
CDS - ZP_06828512.1 HMPREF0724_0794 hypothetical protein 57639 58319 -1
CDS - ZP_06828513.1 HMPREF0724_0795 TetR family transcriptional regulator 58474 59229 1
CDS - ZP_06828514.1 HMPREF0724_0796 Kae1-associated kinase Bud32 59241 60419 -1
CDS - ZP_06828515.1 HMPREF0724_0797 integral membrane protein 60468 61433 -1
CDS aspS ZP_06828516.1 HMPREF0724_0798 aspartate--tRNA ligase 61458 63239 -1
CDS - ZP_06828517.1 HMPREF0724_0799 zinc metallopeptidase 63407 64336 1
CDS menE8 ZP_06828518.1 HMPREF0724_0800 acyl-CoA synthetase 64395 65918 1
CDS - ZP_06828519.1 HMPREF0724_0801 hypothetical protein 65922 67085 -1
CDS atoB5 ZP_06828520.1 HMPREF0724_0802 acetyl-CoA acetyltransferase 67185 68396 1
CDS - ZP_06828521.1 HMPREF0724_0803 radical SAM family Fe-S protein 68418 69443 -1
CDS - ZP_06828522.1 HMPREF0724_0804 endoribonuclease L-PSP family protein 69462 69923 1
CDS - ZP_06828523.1 HMPREF0724_0805 M23 family cell wall peptidase 70009 70653 -1
CDS ccsA ZP_06828524.1 HMPREF0724_0806 CcsA protein 70680 70934 -1
CDS - ZP_06828525.1 HMPREF0724_0807 CopY family transcriptional repressor 71060 71431 1
CDS - ZP_06828526.1 HMPREF0724_0808 integral membrane protein 71428 72375 1
CDS - ZP_06828527.1 HMPREF0724_0809 probable multicopper oxidase 72506 74047 1
CDS - ZP_06828528.1 HMPREF0724_0810 hypothetical protein 74095 74937 1
CDS - ZP_06828529.1 HMPREF0724_0811 HNH endonuclease 74988 76289 1
CDS - ZP_06828530.1 HMPREF0724_0812 TetR family transcriptional regulator 76350 76925 -1
CDS - ZP_06828531.1 HMPREF0724_0813 membrane transporter 76922 78406 -1
CDS uca2 ZP_06828532.1 HMPREF0724_0814 urea carboxylase 78555 80540 -1
CDS - ZP_06828533.1 HMPREF0724_0815 urea carboxylase-associated protein 1 80537 81202 -1
CDS - ZP_06828534.1 HMPREF0724_0816 urea carboxylase-associated protein 2 81199 82077 -1
CDS - ZP_06828535.1 HMPREF0724_0817 permease 82079 83614 -1
CDS - ZP_06828536.1 HMPREF0724_0818 TetR family transcriptional regulator 83858 84565 1
CDS - ZP_06828537.1 HMPREF0724_0819 hypothetical protein 84629 84958 1
CDS - ZP_06828538.1 HMPREF0724_0820 hypothetical protein 84955 86301 1
CDS mdh ZP_06828539.1 HMPREF0724_0821 malate dehydrogenase 86333 87337 -1
CDS - ZP_06828540.1 HMPREF0724_0822 probable transcriptional regulator 87444 90047 -1
CDS - ZP_06828541.1 HMPREF0724_0823 hypothetical protein 90153 90794 -1
CDS hisS ZP_06828542.1 HMPREF0724_0824 histidine--tRNA ligase 90781 92061 -1
CDS - ZP_06828543.1 HMPREF0724_0825 metallo-beta-lactamase superfamily protein 92077 92757 -1
CDS ppiB ZP_06828544.1 HMPREF0724_0826 peptidyl-prolyl cis-trans isomerase 92954 93814 1
CDS - ZP_06828545.1 HMPREF0724_0827 peptidyl-prolyl cis-trans isomerase 93814 94602 1
CDS relA ZP_06828546.1 HMPREF0724_0828 GTP diphosphokinase 94681 97017 -1
CDS apt ZP_06828547.1 HMPREF0724_0829 adenine phosphoribosyltransferase 97099 97665 -1
CDS - ZP_06828548.1 HMPREF0724_0830 ABC superfamily ATP binding cassette transporter, binding protein 97674 99413 -1
CDS secF ZP_06828549.1 HMPREF0724_0831 protein-export membrane protein SecF 99415 100596 -1
CDS secD ZP_06828550.1 HMPREF0724_0832 protein-export membrane protein SecD 100593 102248 -1
CDS yajC ZP_06828551.1 HMPREF0724_0833 preprotein translocase 102425 102757 -1
CDS ruvB ZP_06828552.1 HMPREF0724_0834 crossover junction ATP-dependent DNA helicase RuvB 102936 104069 -1
CDS ruvA ZP_06828553.1 HMPREF0724_0835 crossover junction ATP-dependent DNA helicase RuvA 104066 104671 -1
CDS ruvC ZP_06828554.1 HMPREF0724_0836 crossover junction endoribonuclease subunit C 104668 105243 -1
CDS yebC ZP_06828555.1 HMPREF0724_0837 YebC like protein 105341 106093 -1
CDS - ZP_06828556.1 HMPREF0724_0838 antigen 85 complex protein 106398 107432 1
CDS - ZP_06828557.1 HMPREF0724_0839 glutamine amidotransferase subunit PdxT 107463 108068 -1
CDS tesB2 ZP_06828558.1 HMPREF0724_0840 acyl-CoA thioesterase II 108160 108987 -1
CDS - ZP_06828559.1 HMPREF0724_0841 pyridoxine biosynthesis protein 109094 109996 -1