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Rhodococcus erythropolis SK121, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04385164.1 RHOER0001_5108 hypothetical protein 1 111 1
CDS - ZP_04385264.1 RHOER0001_5109 hydrolase, nudix family 279 1205 -1
CDS ppk ZP_04385172.1 RHOER0001_5110 polyphosphate kinase 1223 3466 -1
CDS - ZP_04385242.1 RHOER0001_5111 2-phospho-L-lactate guanylyltransferase CofC 3518 4195 -1
CDS - ZP_04385157.1 RHOER0001_5112 glycerol-3-phosphate dehydrogenase [NAD(P)+] 2 4394 5392 1
CDS - ZP_04385215.1 RHOER0001_5113 methionine gamma-lyase 5389 6540 1
CDS - ZP_04385199.1 RHOER0001_5114 D-alanine--D-alanine ligase 6612 7718 1
CDS - ZP_04385251.1 RHOER0001_5115 conserved hypothetical protein 7719 8411 -1
CDS thiL ZP_04385169.1 RHOER0001_5116 thiamine-monophosphate kinase 8489 9520 1
CDS - ZP_04385247.1 RHOER0001_5117 siderophore binding protein 9530 10051 1
CDS ung ZP_04385228.1 RHOER0001_5118 uracil-DNA glycosylase 10051 10722 1
CDS - ZP_04385297.1 RHOER0001_5119 enoyl-CoA hydratase/isomerase 10789 11583 -1
CDS rpmB ZP_04385156.1 RHOER0001_5120 ribosomal protein L28 11729 11920 -1
CDS - ZP_04385241.1 RHOER0001_5121 Dak phosphatase 12254 13963 1
CDS recG ZP_04385243.1 RHOER0001_5122 ATP-dependent DNA helicase RecG 14037 16298 1
CDS pyc ZP_04385162.1 RHOER0001_5123 pyruvate carboxylase 16419 19823 1
CDS - ZP_04385233.1 RHOER0001_5124 RNA methyltransferase, RsmD family 19820 20386 1
CDS coaD ZP_04385262.1 RHOER0001_5125 pantetheine-phosphate adenylyltransferase 20383 20877 1
CDS - ZP_04385183.1 RHOER0001_5126 large Ala/Glu-rich protein 21009 21770 1
CDS - ZP_04385184.1 RHOER0001_5127 conserved hypothetical protein 21909 22520 1
CDS rnc ZP_04385245.1 RHOER0001_5128 ribonuclease III 22725 23498 1
CDS mutM ZP_04385239.1 RHOER0001_5129 formamidopyrimidine-DNA glycosylase 23507 24376 1
CDS - ZP_04385227.1 RHOER0001_5130 OsmC family protein 24419 24871 1
CDS - ZP_04385286.1 RHOER0001_5131 conserved hypothetical protein 24871 25794 1
CDS - ZP_04385214.1 RHOER0001_5132 acylphosphatase 25818 26084 1
CDS smc ZP_04385226.1 RHOER0001_5133 chromosome segregation protein SMC 26111 29698 1
CDS - ZP_04385205.1 RHOER0001_5134 cell division protein FtsY 29741 31180 1
CDS amt ZP_04385163.1 RHOER0001_5135 ammonium transporter 31383 32687 1
CDS - ZP_04385258.1 RHOER0001_5136 nitrogen regulatory protein P-II 32744 33082 1
CDS glnD ZP_04385176.1 RHOER0001_5137 protein-P-II uridylyltransferase 33072 35579 1
CDS ffh ZP_04385200.1 RHOER0001_5138 signal recognition particle protein 35695 37272 1
CDS - ZP_04385171.1 RHOER0001_5139 amidohydrolase 3 37276 38358 1
CDS - ZP_04385302.1 RHOER0001_5140 30S ribosomal protein S16 38568 39038 1
CDS rimM ZP_04385170.1 RHOER0001_5141 16S rRNA processing protein RimM 39292 39864 1
CDS trmD ZP_04385232.1 RHOER0001_5143 tRNA (guanine-N1)-methyltransferase 39874 40578 1
CDS - ZP_04385197.1 RHOER0001_5142 riboflavin biosynthesis protein RibD domain protein 40575 41150 -1
CDS - ZP_04385182.1 RHOER0001_5144 transcriptional regulator 41219 41797 1
CDS - ZP_04385192.1 RHOER0001_5145 conserved hypothetical protein 41802 42248 -1
CDS - ZP_04385274.1 RHOER0001_5146 putative membrane protein 42245 44443 -1
CDS - ZP_04385178.1 RHOER0001_5147 putative mannosyltransferase 44616 45602 1
CDS - ZP_04385292.1 RHOER0001_5148 lipopolysaccharide biosynthesis protein RffA 45592 46734 1
CDS - ZP_04385266.1 RHOER0001_5149 beta-lactamase 46761 47717 -1
CDS - ZP_04385177.1 RHOER0001_5150 conserved hypothetical protein 47823 50162 1
CDS - ZP_04385229.1 RHOER0001_5151 putative membrane protein 50267 51154 1
CDS rplS ZP_04385277.1 RHOER0001_5152 ribosomal protein L19 51244 51585 1
CDS lepB ZP_04385273.1 RHOER0001_5153 signal peptidase I 51641 52444 1
CDS rnhB ZP_04385222.1 RHOER0001_5154 ribonuclease HII 52495 53175 1
CDS - ZP_04385202.1 RHOER0001_5155 conserved hypothetical protein 53213 53518 1
CDS - ZP_04385231.1 RHOER0001_5156 conserved hypothetical protein 53603 54784 -1
CDS - ZP_04385203.1 RHOER0001_5157 hypothetical protein 54882 55100 -1
CDS - ZP_04385254.1 RHOER0001_5158 periplasmic binding protein 55182 56183 -1
CDS - ZP_04385195.1 RHOER0001_5159 AraC-family transcriptional regulator 56334 57140 1
CDS - ZP_04385218.1 RHOER0001_5160 hypothetical protein 57255 57989 -1
CDS - ZP_04385283.1 RHOER0001_5161 conserved hypothetical protein 58241 58612 1
CDS - ZP_04385223.1 RHOER0001_5162 Mg chelatase homolog 58612 60120 1
CDS - ZP_04385298.1 RHOER0001_5163 transcriptional regulator, TrmB 60117 61244 1
CDS - ZP_04385208.1 RHOER0001_5164 hypothetical protein 61706 62065 1
CDS - ZP_04385279.1 RHOER0001_5166 siderophore-interacting protein 62359 63129 1
CDS - ZP_04385267.1 RHOER0001_5165 permease of the major facilitator family protein 63126 64322 -1
CDS - ZP_04385253.1 RHOER0001_5167 site-specific tyrosine recombinase XerC 64383 65309 1
CDS - ZP_04385198.1 RHOER0001_5168 conserved hypothetical protein 65433 66542 1
CDS - ZP_04385288.1 RHOER0001_5169 peptidase M23B 66568 67038 -1
CDS - ZP_04385296.1 RHOER0001_5170 hypothetical protein 67221 67364 1
CDS rpsB ZP_04385196.1 RHOER0001_5171 ribosomal protein S2 67376 68233 1
CDS tsf ZP_04385265.1 RHOER0001_5172 translation elongation factor Ts 68368 69195 1
CDS pyrH ZP_04385209.1 RHOER0001_5173 UMP kinase 69396 70124 1
CDS frr ZP_04385263.1 RHOER0001_5174 ribosome recycling factor 70168 70725 1
CDS cdsA ZP_04385160.1 RHOER0001_5175 phosphatidate cytidylyltransferase 70774 71670 1
CDS - ZP_04385221.1 RHOER0001_5176 methyltransferase type 11 71677 72405 1
CDS - ZP_04385175.1 RHOER0001_5177 citrate lyase beta chain 72485 73315 -1
CDS - ZP_04385246.1 RHOER0001_5178 conserved hypothetical protein 73423 73797 -1
CDS - ZP_04385300.1 RHOER0001_5179 radical SAM enzyme, Cfr family 73936 75045 1
CDS - ZP_04385248.1 RHOER0001_5180 conserved hypothetical protein 75123 75392 -1
CDS dxr ZP_04385299.1 RHOER0001_5181 1-deoxy-D-xylulose 5-phosphate reductoisomerase 75513 76670 1
CDS - ZP_04385159.1 RHOER0001_5182 putative zinc metalloprotease 76678 77898 1
CDS ispG ZP_04385235.1 RHOER0001_5183 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 77968 79143 1
CDS - ZP_04385179.1 RHOER0001_5184 acetyltransferase 79255 80091 1
CDS - ZP_04385255.1 RHOER0001_5185 putative penicillin-binding protein 80233 81975 1
CDS - ZP_04385224.1 RHOER0001_5186 response regulator receiver protein 81980 83083 -1
CDS - ZP_04385230.1 RHOER0001_5187 acetyl-coenzyme A synthetase 82968 84590 1
CDS - ZP_04385220.1 RHOER0001_5188 ABC transporter, permease component 84647 85432 -1
CDS phnU ZP_04385287.1 RHOER0001_5189 2-aminoethylphosphonate ABC transporter, permease protein 85407 86309 -1
CDS - ZP_04385186.1 RHOER0001_5190 spermidine/putrescine import ATP-binding protein PotA 86306 87481 -1
CDS - ZP_04385240.1 RHOER0001_5191 extracellular solute-binding protein family 1 87484 88533 -1
CDS - ZP_04385194.1 RHOER0001_5192 conserved hypothetical protein 88559 89236 -1
CDS - ZP_04385272.1 RHOER0001_5193 FAD dependent oxidoreductase 89262 90389 -1
CDS - ZP_04385238.1 RHOER0001_5194 GntR-family transcriptional regulator 90486 91229 1
CDS - ZP_04385190.1 RHOER0001_5195 short-chain dehydrogenase/reductase SDR 91332 92183 1
CDS - ZP_04385212.1 RHOER0001_5196 oxidoreductase 92199 93326 -1
CDS - ZP_04385174.1 RHOER0001_5197 TetR-family transcriptional regulator 93336 94022 -1
CDS - ZP_04385155.1 RHOER0001_5199 hypothetical protein 94220 94345 1
CDS - ZP_04385275.1 RHOER0001_5198 beta-lactamase 94320 95480 -1
CDS - ZP_04385259.1 RHOER0001_5200 conserved hypothetical protein 95607 96527 -1
CDS - ZP_04385217.1 RHOER0001_5201 L-serine ammonia-lyase 96639 97997 -1
CDS - ZP_04385256.1 RHOER0001_5202 metal dependent amidohydrolase 97994 99208 -1
CDS - ZP_04385154.1 RHOER0001_5204 hypothetical protein 99180 99296 1
CDS - ZP_04385168.1 RHOER0001_5203 putative membrane protein 99293 100636 -1
CDS - ZP_04385249.1 RHOER0001_5205 transcriptional regulator, AsnC family 100785 101771 1
CDS - ZP_04385188.1 RHOER0001_5206 endonuclease/exonuclease/phosphatase 101808 102773 -1
CDS - ZP_04385207.1 RHOER0001_5207 sulphate transporter 102822 104516 -1