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Rhodococcus erythropolis SK121, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04386159.1 RHOER0001_3870 conserved hypothetical protein 453 908 -1
CDS - ZP_04386117.1 RHOER0001_3871 conserved hypothetical protein 954 2132 -1
CDS - ZP_04386212.1 RHOER0001_3873 conserved hypothetical protein 2170 3309 1
CDS - ZP_04386157.1 RHOER0001_3872 peptidase S9, prolyl oligopeptidase active site domain protein 3299 5239 -1
CDS - ZP_04386152.1 RHOER0001_3874 aspartate aminotransferase 5316 6569 1
CDS - ZP_04386097.1 RHOER0001_3875 YibE/F family protein 7080 8342 1
CDS - ZP_04386156.1 RHOER0001_3876 putative chaperone protein 8352 10064 -1
CDS - ZP_04386158.1 RHOER0001_3877 UDP-glucose 6-dehydrogenase 10178 11497 -1
CDS - ZP_04386120.1 RHOER0001_3879 protein-tyrosine-phosphatase 11606 12130 1
CDS - ZP_04386185.1 RHOER0001_3878 lipopolysaccharide biosynthesis 12102 13526 -1
CDS - ZP_04386177.1 RHOER0001_3880 UDP-glucose 6-dehydrogenase 13656 15053 -1
CDS fcl ZP_04386195.1 RHOER0001_3881 GDP-fucose synthetase 15037 16047 -1
CDS gmd ZP_04386124.1 RHOER0001_3882 GDP-mannose 4,6-dehydratase 16002 17033 -1
CDS - ZP_04386170.1 RHOER0001_3883 glycosyl transferase, WecB/TagA/CpsF family 17131 17925 -1
CDS - ZP_04386105.1 RHOER0001_3884 putative glycosyl transferase, group 1 17931 19097 -1
CDS - ZP_04386113.1 RHOER0001_3885 succinoglycan biosynthesis protein ExoM 19094 19990 -1
CDS - ZP_04386192.1 RHOER0001_3886 putative membrane protein 19987 21198 -1
CDS - ZP_04386173.1 RHOER0001_3887 putative transferase 21195 22406 -1
CDS - ZP_04386115.1 RHOER0001_3888 O-antigen polymerase family protein 22408 23736 -1
CDS - ZP_04386129.1 RHOER0001_3889 undecaprenyl-phosphate galactosephosphotransferase 23720 25243 -1
CDS - ZP_04386198.1 RHOER0001_3890 hypothetical protein 25244 25594 1
CDS - ZP_04386118.1 RHOER0001_3891 acetyltransferase, gnat family protein 26119 26457 -1
CDS - ZP_04386164.1 RHOER0001_3892 lipopolysaccharide biosynthesis 26839 28284 -1
CDS - ZP_04386107.1 RHOER0001_3893 UDP-glucose 6-dehydrogenase 28924 30249 -1
CDS fcl ZP_04386110.1 RHOER0001_3894 GDP-fucose synthetase 30302 31270 -1
CDS gmd ZP_04386205.1 RHOER0001_3895 GDP-mannose 4,6-dehydratase 31267 32298 -1
CDS - ZP_04386141.1 RHOER0001_3896 polysaccharide biosynthesis protein 32345 33697 -1
CDS - ZP_04386096.1 RHOER0001_3897 hypothetical protein 33694 34350 -1
CDS - ZP_04386131.1 RHOER0001_3898 hypothetical protein 34466 34609 1
CDS - ZP_04386094.1 RHOER0001_3899 glycosyltransferase GtfC 34610 35401 -1
CDS - ZP_04386148.1 RHOER0001_3900 glycosyl transferase, group 1 family protein 35398 36447 -1
CDS - ZP_04386181.1 RHOER0001_3901 O-antigen polymerase family protein 36444 37766 -1
CDS - ZP_04386163.1 RHOER0001_3902 conserved hypothetical protein 37768 38910 -1
CDS - ZP_04386092.1 RHOER0001_3903 putative glycosyl transferase group 1 38891 39961 -1
CDS - ZP_04386154.1 RHOER0001_3904 undecaprenyl-phosphate galactosephosphotransferase 40139 41659 -1
CDS - ZP_04386123.1 RHOER0001_3905 putative membrane protein 42503 44002 1
CDS - ZP_04386187.1 RHOER0001_3906 glycosyltransferase 43996 45468 1
CDS - ZP_04386183.1 RHOER0001_3908 helix-turn-helix domain protein 45721 46056 1
CDS galU ZP_04386116.1 RHOER0001_3907 UTP-glucose-1-phosphate uridylyltransferase 46050 46973 -1
CDS - ZP_04386160.1 RHOER0001_3909 hypothetical protein 47545 48693 -1
CDS - ZP_04386087.1 RHOER0001_3910 ABC-2 type transporter 48740 50473 -1
CDS - ZP_04386175.1 RHOER0001_3911 conserved hypothetical protein 50470 52431 -1
CDS - ZP_04386103.1 RHOER0001_3912 conserved hypothetical protein 52738 53460 1
CDS - ZP_04386111.1 RHOER0001_3913 conserved hypothetical protein 53494 53691 -1
CDS - ZP_04386130.1 RHOER0001_3914 putative transglycosylase 53782 54045 -1
CDS - ZP_04386176.1 RHOER0001_3915 hypothetical protein 54268 54390 -1
CDS - ZP_04386189.1 RHOER0001_3916 conserved hypothetical protein 54455 55039 -1
CDS - ZP_04386136.1 RHOER0001_3917 conserved hypothetical protein 55036 55605 -1
CDS - ZP_04386155.1 RHOER0001_3918 conserved hypothetical protein 55602 55964 -1
CDS - ZP_04386098.1 RHOER0001_3919 conserved hypothetical protein 55987 56166 -1
CDS - ZP_04386167.1 RHOER0001_3920 conserved hypothetical protein 56205 56480 -1
CDS - ZP_04386132.1 RHOER0001_3921 conserved hypothetical protein 56464 56673 -1
CDS - ZP_04386168.1 RHOER0001_3922 stress protein, Gls24 family 56745 57209 -1
CDS - ZP_04386095.1 RHOER0001_3923 RNA polymerase, sigma-24 subunit, ECF family 57396 57974 1
CDS - ZP_04386210.1 RHOER0001_3925 hypothetical protein 57965 58462 1
CDS - ZP_04386166.1 RHOER0001_3924 hypothetical protein 58459 58686 -1
CDS - ZP_04386137.1 RHOER0001_3926 conserved hypothetical protein 58683 58940 -1
CDS - ZP_04386180.1 RHOER0001_3927 PI-type proteinase 59066 59287 1
CDS - ZP_04386209.1 RHOER0001_3928 hypothetical protein 59431 59550 1
CDS - ZP_04386162.1 RHOER0001_3929 putative stas domain protein 59634 59966 1
CDS - ZP_04386101.1 RHOER0001_3930 alpha,alpha-trehalose-phosphate synthase 59963 61450 1
CDS - ZP_04386145.1 RHOER0001_3931 conserved hypothetical protein 61599 61964 1
CDS - ZP_04386188.1 RHOER0001_3932 transcriptional regulator, MerR family 61989 62291 -1
CDS - ZP_04386133.1 RHOER0001_3933 hypothetical protein 62650 62808 1
CDS - ZP_04386199.1 RHOER0001_3934 DNA protection during starvation protein 62893 63438 1
CDS - ZP_04386143.1 RHOER0001_3935 hypothetical protein 63512 63646 1
CDS - ZP_04386207.1 RHOER0001_3936 sensor histidine kinase 63695 64366 1
CDS - ZP_04386091.1 RHOER0001_3937 WhiB-family transcriptional regulator; role in cell cycle control 64552 64869 1
CDS - ZP_04386153.1 RHOER0001_3938 conserved hypothetical protein 64879 65400 -1
CDS - ZP_04386089.1 RHOER0001_3939 putative anti-sigma factor 65554 65988 1
CDS - ZP_04386108.1 RHOER0001_3940 RNA polymerase sigma-F factor 65985 66767 1
CDS - ZP_04386149.1 RHOER0001_3941 modification methylase HgiDII 66784 67032 -1
CDS - ZP_04386104.1 RHOER0001_3942 putative anti-sigma-factor antagonist 67363 67800 1
CDS - ZP_04386182.1 RHOER0001_3943 ribonuclease BN 67887 68864 1
CDS - ZP_04386135.1 RHOER0001_3944 conserved hypothetical protein 69181 69384 1
CDS - ZP_04386186.1 RHOER0001_3945 zinc finger, cdgsh-type domain protein 69513 69752 -1
CDS - ZP_04386161.1 RHOER0001_3947 conserved hypothetical protein 69753 70802 1
CDS - ZP_04386146.1 RHOER0001_3946 putative methylase 70759 71433 -1
CDS - ZP_04386093.1 RHOER0001_3948 response regulator receiver and antar domain protein 71567 72334 1
CDS - ZP_04386134.1 RHOER0001_3949 glycosyl transferase, family 2 72568 73272 1
CDS - ZP_04386090.1 RHOER0001_3950 dehydrogenase 73269 74207 1
CDS - ZP_04386112.1 RHOER0001_3951 LmbE family protein 74201 74959 1
CDS - ZP_04386138.1 RHOER0001_3952 NodS family protein 74956 75570 1
CDS - ZP_04386200.1 RHOER0001_3953 conserved hypothetical protein 75623 75799 -1
CDS - ZP_04386109.1 RHOER0001_3954 endoribonuclease L-PSP 75799 76470 -1
CDS - ZP_04386190.1 RHOER0001_3955 L-amino acid oxidase 76510 78090 -1
CDS - ZP_04386122.1 RHOER0001_3956 putative amino acid transporter 78329 79840 1
CDS - ZP_04386193.1 RHOER0001_3957 transcriptional regulator, IclR family 79840 80592 1
CDS - ZP_04386213.1 RHOER0001_3958 conserved hypothetical protein 80596 82119 -1
CDS - ZP_04386127.1 RHOER0001_3959 hypothetical protein 82150 82317 -1
CDS - ZP_04386100.1 RHOER0001_3961 hypothetical protein 82368 82493 1
CDS - ZP_04386151.1 RHOER0001_3960 conserved hypothetical protein 82448 82732 -1
CDS dcd ZP_04386171.1 RHOER0001_3962 deoxycytidine triphosphate deaminase 82758 83327 -1
CDS - ZP_04386102.1 RHOER0001_3963 hypothetical protein 83496 83615 -1
tRNA - - RHOER0001_6816 tRNA-Gly 83633 83706 1
CDS - ZP_04386202.1 RHOER0001_3965 hypothetical protein 85789 85905 -1
CDS - ZP_04386150.1 RHOER0001_3966 hypothetical protein 85998 86132 -1
CDS - ZP_04386086.1 RHOER0001_3967 transcriptional regulator, GntR family 86353 86715 1
CDS - ZP_04386140.1 RHOER0001_3968 ABC transporter, ATP-binding component 86712 87647 1
CDS - ZP_04386099.1 RHOER0001_3969 putative ABC transporter permease 87644 88384 1