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Rhodococcus erythropolis SK121, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04387223.1 RHOER0001_1163 conserved hypothetical protein 139 1194 -1
CDS - ZP_04387453.1 RHOER0001_1164 hypothetical protein 1191 1400 -1
CDS - ZP_04387357.1 RHOER0001_1165 transcriptional regulator, TetR family protein 1656 2282 1
CDS - ZP_04387329.1 RHOER0001_1166 fumarate reductase/succinate dehydrogenase flavoprotein domain protein 2279 4045 1
CDS - ZP_04387260.1 RHOER0001_1167 ABC transporter ATP-binding protein 4061 5743 1
CDS - ZP_04387346.1 RHOER0001_1168 conserved hypothetical protein 5761 6393 -1
CDS - ZP_04387397.1 RHOER0001_1169 secreted protein 6848 7402 1
CDS - ZP_04387347.1 RHOER0001_1170 transcriptional regulator, MalT family 7415 8146 -1
CDS - ZP_04387259.1 RHOER0001_1171 permease, urea carboxylase system 8344 9903 1
CDS - ZP_04387372.1 RHOER0001_1172 urea carboxylase-associated protein 2 9906 10739 1
CDS - ZP_04387312.1 RHOER0001_1173 urea carboxylase-associated protein 1 10736 11389 1
CDS - ZP_04387429.1 RHOER0001_1174 urea amidolyase 11386 13368 1
CDS - ZP_04387304.1 RHOER0001_1175 cell filamentation protein 13483 14265 -1
CDS - ZP_04387240.1 RHOER0001_1176 cyclic nucleotide-binding protein 14262 15695 -1
CDS - ZP_04387423.1 RHOER0001_1177 conserved hypothetical protein 15745 16629 -1
CDS - ZP_04387351.1 RHOER0001_1178 endoribonuclease L-PSP 16684 17049 -1
CDS - ZP_04387291.1 RHOER0001_1179 radical SAM domain protein 17148 18185 1
CDS - ZP_04387467.1 RHOER0001_1180 methyltransferase type 12 18244 19647 1
CDS - ZP_04387432.1 RHOER0001_1181 serine/threonine protein phosphatase 19644 22187 1
CDS - ZP_04387266.1 RHOER0001_1183 methyltransferase type 12 22194 22892 1
CDS - ZP_04387342.1 RHOER0001_1182 major facilitator superfamily MFS_1 22853 24082 -1
CDS - ZP_04387336.1 RHOER0001_1184 transcriptional regulatory protein 24054 25208 1
CDS - ZP_04387281.1 RHOER0001_1185 hypothetical protein 25175 25660 1
CDS - ZP_04387344.1 RHOER0001_1186 AraC-family transcriptional regulator 25756 25932 -1
CDS - ZP_04387414.1 RHOER0001_1187 AraC-family transcriptional regulator 25929 26573 -1
CDS - ZP_04387466.1 RHOER0001_1188 mannose-6-phosphate isomerase 26663 27034 1
CDS - ZP_04387283.1 RHOER0001_1189 putative metal dependent phosphohydrolase 27047 27763 -1
CDS - ZP_04387355.1 RHOER0001_1190 conserved hypothetical protein 27973 28506 -1
CDS - ZP_04387316.1 RHOER0001_1191 drug resistance transporter EmrB/QacA family protein 28587 30158 -1
CDS - ZP_04387236.1 RHOER0001_1192 transcriptional regulator, TetR family 30200 30832 -1
CDS - ZP_04387436.1 RHOER0001_1193 putative alkylphosphonate utilization operon protein PhnA 30946 31290 1
CDS - ZP_04387471.1 RHOER0001_1194 putative periplasmic binding protein 31392 32423 1
CDS - ZP_04387426.1 RHOER0001_1195 conserved hypothetical protein 32469 33788 -1
CDS - ZP_04387239.1 RHOER0001_1196 conserved hypothetical protein 34024 34443 1
CDS - ZP_04387412.1 RHOER0001_1197 conserved hypothetical protein 34475 35875 1
CDS - ZP_04387330.1 RHOER0001_1198 conserved hypothetical protein 35880 36596 -1
CDS - ZP_04387395.1 RHOER0001_1199 regulatory protein, ArsR 36599 37228 -1
CDS - ZP_04387476.1 RHOER0001_1200 metallopeptidase, zinc binding 37303 38226 -1
CDS aspS ZP_04387257.1 RHOER0001_1201 aspartyl-tRNA synthetase 38390 40198 1
CDS - ZP_04387353.1 RHOER0001_1202 putative membrane protein 40217 41182 1
CDS - ZP_04387420.1 RHOER0001_1203 hypothetical protein 41179 41301 1
CDS - ZP_04387393.1 RHOER0001_1204 conserved hypothetical protein 41371 42555 1
CDS - ZP_04387421.1 RHOER0001_1205 conserved hypothetical protein 42627 43007 -1
CDS - ZP_04387430.1 RHOER0001_1206 recombination factor protein RarA 43131 44543 1
CDS alaS ZP_04387335.1 RHOER0001_1207 alanyl-tRNA synthetase 44621 47293 1
CDS - ZP_04387287.1 RHOER0001_1208 conserved hypothetical protein 47296 47829 1
CDS - ZP_04387481.1 RHOER0001_1209 aminodeoxychorismate lyase 47826 49136 1
CDS aroE ZP_04387288.1 RHOER0001_1210 shikimate-5-dehydrogenase 49126 49965 1
CDS - ZP_04387317.1 RHOER0001_1211 peptidase A24A, prepilin type IV 50163 50669 1
CDS - ZP_04387378.1 RHOER0001_1212 hypothetical protein 50710 50856 -1
CDS - ZP_04387407.1 RHOER0001_1213 peptidase S1 and S6, chymotrypsin/Hap 50895 51593 1
CDS aroC ZP_04387422.1 RHOER0001_1214 chorismate synthase 51705 52892 1
CDS aroK ZP_04387227.1 RHOER0001_1215 shikimate kinase 52906 53415 1
CDS aroB ZP_04387322.1 RHOER0001_1216 3-dehydroquinate synthase 53441 54550 1
CDS aroQ ZP_04387365.1 RHOER0001_1217 3-dehydroquinate dehydratase, type II 54547 54975 1
CDS - ZP_04387449.1 RHOER0001_1218 conserved hypothetical protein 55063 55623 -1
CDS - ZP_04387261.1 RHOER0001_1219 aminopeptidase P 55783 56877 1
CDS efp ZP_04387406.1 RHOER0001_1220 translation elongation factor P 56912 57475 1
CDS nusB ZP_04387455.1 RHOER0001_1221 transcription antitermination factor NusB 57476 57973 1
CDS - ZP_04387425.1 RHOER0001_1222 bifunctional protein PyrR 58147 58788 1
CDS pyrB ZP_04387332.1 RHOER0001_1223 aspartate carbamoyltransferase 58785 59729 1
CDS - ZP_04387438.1 RHOER0001_1224 dihydroorotase 59756 61063 1
CDS - ZP_04387222.1 RHOER0001_1225 integral membrane protein 61070 61636 1
CDS carA ZP_04387376.1 RHOER0001_1226 carbamoyl-phosphate synthase, small subunit 61633 62808 1
CDS carB ZP_04387458.1 RHOER0001_1227 carbamoyl-phosphate synthase, large subunit 62808 66164 1
CDS pyrF ZP_04387446.1 RHOER0001_1228 orotidine 5'-phosphate decarboxylase 66161 66982 1
CDS - ZP_04387313.1 RHOER0001_1229 putative integral membrane protein 66986 68239 1
CDS - ZP_04387386.1 RHOER0001_1230 hypothetical protein 68357 68479 -1
CDS - ZP_04387274.1 RHOER0001_1231 integration host factor 68609 68929 1
CDS gmk ZP_04387250.1 RHOER0001_1232 guanylate kinase 68966 69565 1
CDS rpoZ ZP_04387444.1 RHOER0001_1233 DNA-directed RNA polymerase, omega subunit 69664 69963 1
CDS coaBC ZP_04387337.1 RHOER0001_1234 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 69960 71258 1
CDS metK ZP_04387276.1 RHOER0001_1235 methionine adenosyltransferase 71447 72661 1
CDS priA ZP_04387348.1 RHOER0001_1236 primosomal protein N 72687 74705 1
CDS - ZP_04387384.1 RHOER0001_1237 transcriptional regulator, PadR family 74743 75546 1
CDS - ZP_04387428.1 RHOER0001_1238 secreted lipase 75662 76660 1
CDS - ZP_04387349.1 RHOER0001_1239 conserved hypothetical protein 76718 76924 -1
CDS fmt ZP_04387295.1 RHOER0001_1240 methionyl-tRNA formyltransferase 77213 78136 1
CDS - ZP_04387352.1 RHOER0001_1241 Fmu protein 78133 79581 1
CDS - ZP_04387373.1 RHOER0001_1242 conserved hypothetical protein 79622 79969 1
CDS rpe ZP_04387278.1 RHOER0001_1243 ribulose-phosphate 3-epimerase 80046 80717 1
CDS ribD ZP_04387474.1 RHOER0001_1244 riboflavin biosynthesis protein RibD 80726 81778 1
CDS ribE ZP_04387341.1 RHOER0001_1246 riboflavin synthase, alpha subunit 81784 82392 1
CDS - ZP_04387403.1 RHOER0001_1245 hypothetical protein 82374 82502 -1
CDS - ZP_04387282.1 RHOER0001_1247 riboflavin biosynthesis protein ribBA 82503 83777 1
CDS ribH ZP_04387447.1 RHOER0001_1248 6,7-dimethyl-8-ribityllumazine synthase 83774 84271 1
CDS - ZP_04387435.1 RHOER0001_1249 putative membrane protein 84268 84741 1
CDS uvrC ZP_04387254.1 RHOER0001_1250 excinuclease ABC subunit C 84816 87008 1
CDS - ZP_04387321.1 RHOER0001_1251 conserved hypothetical protein 87005 87904 1
CDS - ZP_04387391.1 RHOER0001_1252 conserved hypothetical protein 87901 88965 1
CDS - ZP_04387228.1 RHOER0001_1253 conserved hypothetical protein 88956 89939 1
CDS gap ZP_04387300.1 RHOER0001_1254 glyceraldehyde-3-phosphate dehydrogenase, type I 90098 91117 1
CDS pgk ZP_04387350.1 RHOER0001_1255 phosphoglycerate kinase 91135 92346 1
CDS tpiA ZP_04387249.1 RHOER0001_1256 triose-phosphate isomerase 92353 93138 1
CDS - ZP_04387473.1 RHOER0001_1257 protein-tyrosine phosphatase 93228 93998 -1
CDS secG ZP_04387394.1 RHOER0001_1258 preprotein translocase, SecG subunit 94208 94441 1
CDS ppc ZP_04387270.1 RHOER0001_1259 phosphoenolpyruvate carboxylase 94542 97319 1
CDS - ZP_04387328.1 RHOER0001_1261 3-oxoacyl-[acyl-carrier-protein] reductase 97425 98210 1
CDS - ZP_04387264.1 RHOER0001_1260 hypothetical protein 98197 98721 -1
CDS - ZP_04387400.1 RHOER0001_1262 conserved hypothetical protein 98882 99187 -1