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Rhodococcus erythropolis SK121, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04387661.1 RHOER0001_6688 conserved hypothetical protein 182 1489 1
CDS - ZP_04387712.1 RHOER0001_6687 von Willebrand factor, type A 1486 3087 -1
CDS - ZP_04387697.1 RHOER0001_6689 acyl-CoA synthetase 3301 4716 -1
CDS - ZP_04387691.1 RHOER0001_6690 putative membrane protein 4726 5406 -1
CDS dapC ZP_04387671.1 RHOER0001_6691 succinyldiaminopimelate transaminase 5471 6574 -1
CDS - ZP_04387693.1 RHOER0001_6692 ferredoxin 6580 6903 -1
CDS - ZP_04387692.1 RHOER0001_6693 conserved hypothetical protein 7050 7808 -1
CDS - ZP_04387653.1 RHOER0001_6694 radical SAM domain protein, CofH family 7808 10366 -1
CDS - ZP_04387662.1 RHOER0001_6695 conserved hypothetical protein 10485 10673 -1
CDS - ZP_04387641.1 RHOER0001_6696 hypothetical protein 10734 10835 -1
CDS - ZP_04387645.1 RHOER0001_6697 bacterial membrane flanked domain protein 10750 11259 1
CDS - ZP_04387676.1 RHOER0001_6699 bacterial membrane flanked domain protein 11256 12827 1
CDS hemD ZP_04387696.1 RHOER0001_6698 uroporphyrinogen-III synthase 12787 13632 -1
CDS - ZP_04387644.1 RHOER0001_6700 conserved hypothetical protein 13684 14100 -1
CDS - ZP_04387655.1 RHOER0001_6701 conserved hypothetical protein 14193 14351 -1
CDS mshB ZP_04387670.1 RHOER0001_6702 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase 14459 15343 -1
CDS - ZP_04387664.1 RHOER0001_6703 bacterial extracellular solute-binding protein, family 5 15340 17244 -1
CDS typA ZP_04387695.1 RHOER0001_6704 GTP-binding protein TypA/BipA 17276 19183 -1
CDS - ZP_04387652.1 RHOER0001_6706 conserved hypothetical protein 19508 19684 1
CDS - ZP_04387648.1 RHOER0001_6705 mutt/nudix hydrolase family protein 19662 20111 -1
CDS - ZP_04387681.1 RHOER0001_6707 pterin-4-alpha-carbinolamine dehydratase 20104 20406 1
CDS - ZP_04387678.1 RHOER0001_6708 conserved hypothetical protein 20678 21421 1
CDS - ZP_04387682.1 RHOER0001_6710 conserved hypothetical protein 21515 21898 1
CDS - ZP_04387702.1 RHOER0001_6709 transcriptional regulator, MarR family 21889 22347 -1
CDS - ZP_04387663.1 RHOER0001_6711 membrane transport protein 22433 23863 1
CDS - ZP_04387642.1 RHOER0001_6713 conserved hypothetical protein 24099 24599 1
CDS - ZP_04387649.1 RHOER0001_6712 secreted protein 24586 25368 -1
CDS - ZP_04387654.1 RHOER0001_6714 hypothetical protein 25590 25769 -1
CDS - ZP_04387686.1 RHOER0001_6716 conserved hypothetical protein 26255 26494 1
CDS - ZP_04387667.1 RHOER0001_6715 antibiotic biosynthesis monooxygenase 26482 27423 -1
CDS guaD ZP_04387685.1 RHOER0001_6717 guanine deaminase 27425 28825 -1
CDS - ZP_04387711.1 RHOER0001_6718 putative conserved integral membrane protein 28895 29629 -1
CDS - ZP_04387675.1 RHOER0001_6719 iron ABC transporter substrate-binding protein 29762 30745 -1
CDS - ZP_04387674.1 RHOER0001_6720 3-demethylubiquinone-9 3-methyltransferase 30834 31313 -1
CDS - ZP_04387668.1 RHOER0001_6721 antigen 85-A 31399 32331 -1
CDS - ZP_04387700.1 RHOER0001_6722 antigen 85-A 32382 33386 -1
CDS - ZP_04387687.1 RHOER0001_6723 hypothetical protein 33719 33850 -1
CDS - ZP_04387707.1 RHOER0001_6724 conserved hypothetical protein 34122 35243 1
CDS - ZP_04387643.1 RHOER0001_6725 fumarate hydratase class I, anaerobic 35358 37055 1
CDS - ZP_04387659.1 RHOER0001_6726 conserved hypothetical protein 37117 37467 -1
CDS - ZP_04387666.1 RHOER0001_6727 G/U mismatch-specific DNA glycosylase 37520 38083 -1
CDS - ZP_04387704.1 RHOER0001_6728 conserved hypothetical protein 38104 39432 -1
CDS - ZP_04387683.1 RHOER0001_6729 DoxX family protein 39465 39941 -1
CDS - ZP_04387699.1 RHOER0001_6730 conserved hypothetical protein 40017 40400 -1
CDS - ZP_04387720.1 RHOER0001_6731 conserved hypothetical protein 40397 40783 -1
CDS - ZP_04387705.1 RHOER0001_6732 L-lactate dehydrogenase 40824 41882 -1
CDS - ZP_04387701.1 RHOER0001_6733 conserved hypothetical protein 41897 42739 1
CDS - ZP_04387709.1 RHOER0001_6734 glycerophosphoryl diester phosphodiesterase 42835 43899 1
CDS - ZP_04387657.1 RHOER0001_6735 hypothetical protein 44014 44169 1
tRNA - - RHOER0001_6849 tRNA-His 44196 44271 -1
CDS - ZP_04387677.1 RHOER0001_6737 hypothetical protein 44212 44427 -1
CDS - ZP_04387638.1 RHOER0001_6738 ribosomal pseudouridine synthase 44471 45430 1
CDS ychF ZP_04387723.1 RHOER0001_6739 GTP-binding protein YchF 45449 46528 -1
CDS - ZP_04387708.1 RHOER0001_6740 conserved hypothetical protein 46599 47120 -1
CDS - ZP_04387679.1 RHOER0001_6741 glutamate synthase 47219 48787 1
CDS - ZP_04387680.1 RHOER0001_6742 carbon starvation protein A 48900 51182 1
CDS - ZP_04387658.1 RHOER0001_6743 conserved hypothetical protein 51185 51394 1
CDS - ZP_04387698.1 RHOER0001_6744 conserved hypothetical protein 51401 51805 -1
CDS - ZP_04387694.1 RHOER0001_6745 integral membrane protein 51958 53151 1
CDS - ZP_04387660.1 RHOER0001_6746 ATP-dependent dsDNA exonuclease SbcC 53152 56130 -1
CDS - ZP_04387713.1 RHOER0001_6747 ATP-dependent dsDNA exonuclease SbcD 56127 57332 -1
CDS - ZP_04387710.1 RHOER0001_6748 hypothetical protein 57388 57510 1
CDS - ZP_04387688.1 RHOER0001_6749 conserved hypothetical protein 57520 58476 1
CDS ispH ZP_04387718.1 RHOER0001_6750 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 58546 59559 -1
CDS - ZP_04387639.1 RHOER0001_6751 conserved hypothetical protein 59707 60312 1
CDS xseA ZP_04387703.1 RHOER0001_6752 exodeoxyribonuclease VII, large subunit 60309 61574 1
CDS xseB ZP_04387721.1 RHOER0001_6753 exodeoxyribonuclease VII, small subunit 61571 61789 1
CDS - ZP_04387651.1 RHOER0001_6754 conserved hypothetical protein 61811 62380 -1
CDS glpX ZP_04387647.1 RHOER0001_6755 fructose-1,6-bisphosphatase, class II 62561 63595 1
CDS - ZP_04387665.1 RHOER0001_6756 fumarate hydratase class II 1 63697 65100 1
CDS - ZP_04387717.1 RHOER0001_6757 NADP oxidoreductase coenzyme f420-dependent 65150 65821 -1
CDS - ZP_04387690.1 RHOER0001_6758 hypothetical protein 65814 65927 1
CDS - ZP_04387650.1 RHOER0001_6759 conserved hypothetical protein 65929 66384 -1
CDS - ZP_04387684.1 RHOER0001_6760 TetR-family transcriptional regulator 66725 67291 1
CDS - ZP_04387706.1 RHOER0001_6761 integral membrane transport protein 67389 68960 1
CDS - ZP_04387716.1 RHOER0001_6762 penicillin-binding protein 4 69058 70671 1
CDS - ZP_04387669.1 RHOER0001_6763 limonene-1,2-epoxide hydrolase catalytic domain protein 70689 71114 1
CDS - ZP_04387672.1 RHOER0001_6764 4-carboxymuconolactone decarboxylase 71145 71549 1
CDS - ZP_04387719.1 RHOER0001_6765 PhoH2 protein 71610 72977 -1
CDS - ZP_04387722.1 RHOER0001_6766 two-component system response regulator 73253 73972 -1
CDS - ZP_04387646.1 RHOER0001_6767 amide hydrolase 73996 75429 -1
CDS glyA ZP_04387640.1 RHOER0001_6768 serine hydroxymethyltransferase 75582 76889 -1
CDS - ZP_04387673.1 RHOER0001_6769 CalR9 protein 76966 78162 -1
CDS coaA ZP_04387715.1 RHOER0001_6770 pantothenate kinase 78335 79267 1
CDS uppS ZP_04387656.1 RHOER0001_6771 di-trans,poly-cis-decaprenylcistransferase 79274 80041 -1
CDS - ZP_04387714.1 RHOER0001_6773 channel protein, hemolysin III family 80214 80882 1
CDS - ZP_04387689.1 RHOER0001_6772 transcriptional regulator, Fis family 80849 81170 -1