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Rhodococcus erythropolis SK121, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04387775.1 RHOER0001_5391 inner membrane protein 104 466 1
CDS - ZP_04387808.1 RHOER0001_5392 thioredoxin 518 1468 1
CDS - ZP_04387822.1 RHOER0001_5393 putative neutral zinc metallopeptidase 1487 2935 -1
CDS glgB ZP_04387811.1 RHOER0001_5394 1,4-alpha-glucan branching enzyme 2935 5136 -1
CDS - ZP_04387748.1 RHOER0001_5395 alpha amylase, catalytic domain protein 5136 7160 -1
CDS glgP ZP_04387809.1 RHOER0001_5396 alpha-glucan phosphorylase 7338 9938 1
CDS - ZP_04387818.1 RHOER0001_5397 DeaD/DeaH family helicase 10007 12055 -1
CDS - ZP_04387776.1 RHOER0001_5398 pyrazinamidase/nicotinamidase 12065 12712 -1
CDS - ZP_04387806.1 RHOER0001_5399 putative nicotinate phosphoribosyltransferase 12709 14151 -1
CDS clpS ZP_04387798.1 RHOER0001_5400 ATP-dependent Clp protease adaptor protein ClpS 13994 14482 1
CDS - ZP_04387763.1 RHOER0001_5401 hypothetical protein 14539 15129 1
CDS - ZP_04387754.1 RHOER0001_5402 peptidase S58, DmpA 15126 16193 1
CDS - ZP_04387823.1 RHOER0001_5403 rhomboid family protein 16286 16945 1
CDS - ZP_04387786.1 RHOER0001_5404 metal-dependent hydrolase of the beta-lactamase family protein III 17034 17801 1
CDS rph ZP_04387777.1 RHOER0001_5405 ribonuclease PH 17854 18639 1
CDS rdgB ZP_04387815.1 RHOER0001_5406 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 18643 19251 1
CDS - ZP_04387779.1 RHOER0001_5407 Pks14 protein 19314 19694 -1
CDS - ZP_04387797.1 RHOER0001_5408 conserved lipoprotein LprD 19691 20335 -1
CDS - ZP_04387782.1 RHOER0001_5409 hydantoin racemase 20404 21123 1
tRNA - - RHOER0001_6830 tRNA-Leu 21178 21262 -1
CDS - ZP_04387750.1 RHOER0001_5411 conserved hypothetical protein 21336 22052 -1
CDS - ZP_04387794.1 RHOER0001_5412 conserved hypothetical protein 22472 31783 1
CDS acpS ZP_04387807.1 RHOER0001_5413 holo-[acyl-carrier-protein] synthase 31794 32192 1
CDS - ZP_04387824.1 RHOER0001_5414 transcriptional regulator 32251 32952 -1
CDS - ZP_04387799.1 RHOER0001_5416 peptidase M20 33243 34592 1
CDS - ZP_04387803.1 RHOER0001_5415 antioxidant, AhpC/TSA family 34589 35044 -1
CDS - ZP_04387744.1 RHOER0001_5417 conserved hypothetical protein 35208 35429 1
tRNA - - RHOER0001_6831 tRNA-Lys 35493 35568 -1
CDS - ZP_04387758.1 RHOER0001_5419 6-aminohexanoate-cyclic-dimer hydrolase 35662 37092 -1
tRNA - - RHOER0001_6832 tRNA-Lys 37201 37276 -1
CDS - ZP_04387796.1 RHOER0001_5421 ErfK/YbiS/YcfS/YnhG family protein 37606 38814 1
CDS - ZP_04387761.1 RHOER0001_5422 retinol dehydrogenase 12 38948 39910 -1
CDS - ZP_04387785.1 RHOER0001_5423 transcriptional regulator, MerR family 39966 40376 1
tRNA - - RHOER0001_6833 tRNA-His 40662 40739 -1
CDS - ZP_04387821.1 RHOER0001_5425 oligoribonuclease 40823 41431 -1
CDS - ZP_04387789.1 RHOER0001_5426 conserved hypothetical protein 41543 43282 1
CDS lysA ZP_04387790.1 RHOER0001_5427 diaminopimelate decarboxylase 43302 44645 -1
CDS - ZP_04387746.1 RHOER0001_5428 conserved hypothetical protein 44781 45335 -1
CDS - ZP_04387757.1 RHOER0001_5429 short-chain dehydrogenase 45391 46194 -1
CDS - ZP_04387752.1 RHOER0001_5430 oxidoreductase, FAD/FMN-binding family 46214 48244 -1
CDS - ZP_04387768.1 RHOER0001_5431 transcriptional regulator, PadR family 48241 48855 -1
CDS - ZP_04387766.1 RHOER0001_5433 permease of the major facilitator family protein 48984 50351 1
CDS - ZP_04387804.1 RHOER0001_5432 conserved hypothetical protein 50341 51162 -1
CDS - ZP_04387800.1 RHOER0001_5434 epoxide hydrolase 51238 52077 -1
CDS - ZP_04387772.1 RHOER0001_5435 regulatory protein, TetR 52113 52808 -1
CDS - ZP_04387788.1 RHOER0001_5436 oxidoreductase domain protein 52977 54110 1
CDS - ZP_04387742.1 RHOER0001_5437 linoleoyl-CoA desaturase, DesA3_2 54146 55318 1
CDS - ZP_04387740.1 RHOER0001_5438 conserved hypothetical protein 55332 55577 1
CDS - ZP_04387812.1 RHOER0001_5439 hypothetical protein 55732 55899 -1
CDS - ZP_04387816.1 RHOER0001_5440 hypothetical protein 55980 56093 -1
CDS - ZP_04387771.1 RHOER0001_5441 hypothetical protein 56143 56286 -1
CDS - ZP_04387764.1 RHOER0001_5442 hypothetical protein 56411 56524 -1
CDS - ZP_04387819.1 RHOER0001_5443 conserved hypothetical protein 56650 57909 -1
CDS - ZP_04387813.1 RHOER0001_5444 NAD(p)-specific glutamate dehydrogenase 58394 59737 -1
CDS - ZP_04387759.1 RHOER0001_5445 conserved hypothetical protein 60006 61340 1
CDS glnA ZP_04387810.1 RHOER0001_5446 glutamine synthetase, catalytic domain protein 61424 63601 -1
CDS - ZP_04387743.1 RHOER0001_5447 antibiotic biosynthesis monooxygenase domain protein 63783 64094 1
CDS - ZP_04387769.1 RHOER0001_5448 hypothetical protein 64121 64348 -1
CDS - ZP_04387760.1 RHOER0001_5449 conserved hypothetical protein 64306 64458 -1
CDS - ZP_04387783.1 RHOER0001_5450 sortase family protein 64459 65274 -1
CDS - ZP_04387787.1 RHOER0001_5451 conserved hypothetical protein 65341 65484 -1
CDS - ZP_04387762.1 RHOER0001_5452 lpxtg-motif cell wall anchor domain protein 65612 70255 -1
CDS - ZP_04387745.1 RHOER0001_5453 hypothetical protein 71430 71567 1
CDS - ZP_04387749.1 RHOER0001_5454 hypothetical protein 71966 72124 -1
CDS - ZP_04387801.1 RHOER0001_5455 hypothetical protein 72243 72356 1
CDS - ZP_04387791.1 RHOER0001_5456 putative membrane protein 72426 73832 -1
CDS - ZP_04387755.1 RHOER0001_5457 hypothetical protein 73985 74743 -1
CDS - ZP_04387741.1 RHOER0001_5458 hypothetical protein 75061 75192 1
tRNA - - RHOER0001_6834 tRNA-Arg 75665 75740 -1
CDS - ZP_04387820.1 RHOER0001_5460 hypothetical protein 75825 75962 -1
CDS - ZP_04387784.1 RHOER0001_5461 ABC-type transporter, permease component 75925 77973 1
CDS - ZP_04387795.1 RHOER0001_5462 single-strand binding protein 78156 78569 1
CDS - ZP_04387765.1 RHOER0001_5463 transcriptional regulator, MarR family 78574 79032 -1
CDS - ZP_04387747.1 RHOER0001_5464 ABC transporter, ATP-binding protein 79124 80956 1
CDS - ZP_04387793.1 RHOER0001_5465 3-oxosteroid 1-dehydrogenase 81076 82764 -1
CDS - ZP_04387817.1 RHOER0001_5466 putative acyl-CoA dehydrogenase 82912 84111 -1
CDS - ZP_04387805.1 RHOER0001_5467 zinc-containing alcohol dehydrogenase family protein 84137 85117 -1
CDS - ZP_04387781.1 RHOER0001_5468 MaoC domain protein dehydratase 85114 85536 -1
CDS - ZP_04387767.1 RHOER0001_5469 conserved hypothetical protein 85533 85982 -1
CDS - ZP_04387802.1 RHOER0001_5470 3-oxoacyl-[acyl-carrier-protein] reductase 86010 86801 -1
CDS - ZP_04387814.1 RHOER0001_5471 peroxisomal hydratase-dehydrogenase-epimerase 86788 87663 -1
CDS - ZP_04387773.1 RHOER0001_5472 oxidoreductase, 2-nitropropane dioxygenase family 87665 88795 -1
CDS - ZP_04387739.1 RHOER0001_5473 coenzyme A transferase, subunit B 88792 89550 -1
CDS - ZP_04387778.1 RHOER0001_5474 CoA-transferase 89547 90410 -1
CDS - ZP_04387780.1 RHOER0001_5475 transcriptional regulator, TetR family 90571 91203 1
CDS - ZP_04387751.1 RHOER0001_5476 aminoglycoside phosphotransferase 91200 92246 1
CDS - ZP_04387756.1 RHOER0001_5477 putative transcriptional regulator 92565 93443 1
CDS - ZP_04387792.1 RHOER0001_5478 TetR-family transcriptional regulator 93412 94209 1
CDS - ZP_04387774.1 RHOER0001_5479 pigment production hydroxylase 94337 95374 1
CDS - ZP_04387753.1 RHOER0001_5480 pigment production hydroxylase 95329 95514 1
CDS - ZP_04387770.1 RHOER0001_5481 multidrug resistance transporter, MFS family 95576 96797 -1