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Roseovarius sp. HTCC2601, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - R2601_t01437 tRNA-Met 26 99 -1
rRNA - - R2601_r01441 23S ribosomal RNA 483 3380 -1
tRNA - - R2601_t01435 tRNA-Ile 3780 3853 -1
tRNA - - R2601_t01433 tRNA-Ala 3879 3951 -1
CDS - ZP_01441730.1 R2601_00605 putative integrase 5902 7131 1
CDS - ZP_01441731.1 R2601_00610 INTEGRASE/RECOMBINASE 7128 8483 1
CDS - ZP_01441732.1 R2601_00615 integrase/recombinase 8929 9483 1
CDS - ZP_01441733.1 R2601_00620 hypothetical protein 10077 11090 -1
CDS - ZP_01441734.1 R2601_00625 hypothetical protein 11409 11525 1
CDS - ZP_01441735.1 R2601_00630 Glucose-methanol-choline oxidoreductase:GMC oxidoreductase 11757 13358 -1
CDS - ZP_01441736.1 R2601_00635 SHIKIMATE 5-DEHYDROGENASE 13355 14200 -1
CDS - ZP_01441737.1 R2601_00640 putative dehydrogenase, possibly aldehyde dehydrogenase protein 14197 14691 -1
CDS - ZP_01441738.1 R2601_00645 3-ketoacyl-(acyl-carrier-protein) reductase 14702 15505 -1
CDS - ZP_01441739.1 R2601_00650 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase 15502 16206 -1
CDS - ZP_01441740.1 R2601_00655 high-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid 16199 17998 -1
CDS - ZP_01441741.1 R2601_00660 branched-chain amino acid ABC transporter, permease protein 17995 18882 -1
CDS - ZP_01441742.1 R2601_00665 Leu/Ile/Val-binding protein family:Extracellular ligand-binding receptor 18951 20147 -1
CDS - ZP_01441743.1 R2601_00670 hypothetical protein 20193 21923 -1
CDS - ZP_01441744.1 R2601_00675 Zinc-containing alcohol dehydrogenase superfamily protein 21927 22928 -1
CDS - ZP_01441745.1 R2601_00680 sorbitol dehydrogenase 22925 23980 -1
CDS - ZP_01441746.1 R2601_00685 Bacterial regulatory protein, GntR family 24132 24812 1
CDS - ZP_01441747.1 R2601_00690 probable glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide 25080 26393 1
CDS - ZP_01441748.1 R2601_00695 ABC sugar transporter, inner membrane subunit 26550 27431 1
CDS - ZP_01441749.1 R2601_00700 Binding-protein-dependent transport systems inner membrane component 27452 28288 1
CDS - ZP_01441750.1 R2601_00705 phenol hydroxylase, putative 28069 29118 -1
CDS - ZP_01441751.1 R2601_00710 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein 28291 29343 1
CDS - ZP_01441752.1 R2601_00715 transcription regulator 29386 30330 -1
CDS - ZP_01441753.1 R2601_00720 sarcosine oxidase, beta subunit family protein 30451 31701 1
CDS - ZP_01441754.1 R2601_00725 sarcosine oxidase, delta subunit family protein 31717 31998 1
CDS - ZP_01441755.1 R2601_00730 sarcosine oxidase, alpha subunit family protein 31995 34937 1
CDS - ZP_01441756.1 R2601_00735 sarcosine oxidase, gamma subunit family protein 34930 35490 1
CDS - ZP_01441757.1 R2601_00740 hypothetical protein 35686 37692 -1
CDS - ZP_01441758.1 R2601_00745 hypothetical protein 37792 39060 -1
CDS - ZP_01441759.1 R2601_00750 Tetratricopeptide TPR_4 39057 40634 -1
CDS - ZP_01441760.1 R2601_00755 von Willebrand factor type A domain protein 40631 41638 -1
CDS - ZP_01441761.1 R2601_00760 hypothetical protein 41635 42135 -1
CDS - ZP_01441762.1 R2601_00765 hypothetical protein 42132 43109 -1
CDS - ZP_01441763.1 R2601_00770 ATPase associated with various cellular activities, AAA_3 43120 44124 -1
CDS - ZP_01441764.1 R2601_00775 nonspecific acid phosphatase precursor 44147 45118 -1
CDS - ZP_01441765.1 R2601_00780 arylsulfatase 45217 46797 -1
CDS - ZP_01441766.1 R2601_00785 two component, sigma54 specific, transcriptional regulator, Fis family protein 46981 47391 -1
CDS - ZP_01441767.1 R2601_00790 hypothetical protein 47545 48228 -1
CDS - ZP_01441768.1 R2601_00795 replication protein 48805 50109 1
CDS - ZP_01441769.1 R2601_00800 replication protein, putative 50106 51203 1
CDS - ZP_01441770.1 R2601_00805 Sigma-54 dependent transcriptional regulator 51721 53025 -1
CDS - ZP_01441771.1 R2601_00810 sensor histidine kinase 53022 54815 -1
CDS - ZP_01441772.1 R2601_00815 hypothetical protein 54815 55213 -1
CDS - ZP_01441773.1 R2601_00820 TRAP-T family transporter with fused DctQ/DctM subunits 55183 57279 -1
CDS - ZP_01441774.1 R2601_00825 TRAP-T family transporter, DctP subunit 57337 58284 -1
CDS - ZP_01441775.1 R2601_00830 putative phosphotransferase 58559 59707 1
CDS - ZP_01441776.1 R2601_00835 putative aminotransferase 59700 60983 1
CDS - ZP_01441777.1 R2601_00840 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family 61023 61730 1
CDS - ZP_01441778.1 R2601_00845 Probable sodium/sulphate symporter 61734 63515 -1
CDS - ZP_01441779.1 R2601_00850 putative transketolase beta subunit protein 63698 64732 -1
CDS - ZP_01441780.1 R2601_00855 putative transketolase alpha subunit protein 64729 65577 -1
CDS - ZP_01441781.1 R2601_00860 glycerone kinase 65645 67387 -1
CDS - ZP_01441782.1 R2601_00865 hypothetical protein 67402 68214 -1
CDS - ZP_01441783.1 R2601_00870 putative oxidoreductase protein 68556 69317 1
CDS - ZP_01441784.1 R2601_00875 putative periplasmic binding protein 69460 70428 1
CDS - ZP_01441785.1 R2601_00880 hypothetical protein 70425 70982 1
CDS - ZP_01441786.1 R2601_00885 putative transmembrane protein 70996 72252 1
CDS - ZP_01441787.1 R2601_00890 transcriptional regulatory protein 72362 73351 -1
CDS - ZP_01441788.1 R2601_00895 riboflavin synthase, beta subunit 73706 74182 1
CDS - ZP_01441789.1 R2601_00900 transketolase 74238 76244 -1
CDS - ZP_01441790.1 R2601_00905 triosephosphate isomerase 76389 77174 1
CDS - ZP_01441791.1 R2601_00910 ribose-5-phosphate isomerase B 77171 77632 1
CDS - ZP_01441792.1 R2601_00915 fructose-1,6-bisphosphatase 77698 78666 1
CDS - ZP_01441793.1 R2601_00920 fructose-bisphosphate aldolase 78671 79705 1
CDS - ZP_01441794.1 R2601_00925 hypothetical protein 79981 80058 1
CDS - ZP_01441795.1 R2601_00930 hypothetical protein 81249 81515 -1
CDS - ZP_01441796.1 R2601_00935 hypothetical protein 81493 81762 -1
CDS - ZP_01441797.1 R2601_00940 Periplasmic binding protein/LacI transcriptional regulator 81965 82915 -1
CDS - ZP_01441798.1 R2601_00945 Bacterial inner-membrane translocator:Sodium:dicarboxylate symporter 83009 84043 -1
CDS - ZP_01441799.1 R2601_00950 ribose ABC transporter, ATP-binding protein 84055 85596 -1
CDS - ZP_01441800.1 R2601_00955 hypothetical protein 85593 86234 -1
CDS - ZP_01441801.1 R2601_00960 Carbohydrate kinase, FGGY 86726 88333 1
CDS - ZP_01441802.1 R2601_00965 FAD-dependent glycerol-3-phosphate dehydrogenase:FAD dependent oxidoreductase 88335 89843 1
CDS - ZP_01441803.1 R2601_00970 D-erythrulose 4-phosphate dehydrogenase 89843 90775 1
CDS - ZP_01441804.1 R2601_00975 Putative sugar-binding domain 90874 91809 1
CDS - ZP_01441805.1 R2601_00980 Bacterial regulatory protein, DeoR family 91854 92621 1
CDS - ZP_01441806.1 R2601_00985 D-mannonate oxidoreductase 92656 94116 -1
CDS - ZP_01441807.1 R2601_00990 mannonate dehydratase 94118 95332 -1
CDS - ZP_01441808.1 R2601_00995 transcriptional regulator, GntR family protein 95459 96157 1
CDS - ZP_01441809.1 R2601_01000 TRAP dicarboxylate transporter, DctP subunit, putative 96195 97172 1
CDS - ZP_01441810.1 R2601_01005 TRAP dicarboxylate transporter, DctQ subunit 97294 97794 1
CDS - ZP_01441811.1 R2601_01010 TRAP dicarboxylate transporter, DctM subunit 97796 99073 1
CDS - ZP_01441812.1 R2601_01015 L-idonate 5-dehydrogenase 99084 100133 1
CDS - ZP_01441813.1 R2601_01020 exogenous ferric siderophore receptor 100436 102472 1
CDS - ZP_01441814.1 R2601_01025 Ser/Thr protein phosphatase family protein 102771 103934 1
CDS - ZP_01441815.1 R2601_01030 peptidase, M20/M25/M40 family protein 104083 105228 -1
CDS - ZP_01441816.1 R2601_01035 transcriptional regulator (IclR family) protein 105244 106032 -1
CDS - ZP_01441817.1 R2601_01040 putative 2-dehydropantoate 2-reductase 106057 107070 -1
CDS - ZP_01441818.1 R2601_01045 hypothetical protein 107060 108781 -1
CDS - ZP_01441819.1 R2601_01050 3-oxoacyl-(acyl-carrier-protein) reductase 108828 109643 -1
CDS - ZP_01441820.1 R2601_01055 ABC opine/polyamine transporter, periplasmic binding protein 109643 110683 -1
CDS - ZP_01441821.1 R2601_01060 ABC transporter ATP-binding protein 110719 111777 -1
CDS - ZP_01441822.1 R2601_01065 polyamine ABC transporter (permease) 111777 112550 -1
CDS - ZP_01441823.1 R2601_01070 ABC transporter permease protein 112550 113467 -1
CDS - ZP_01441824.1 R2601_01075 hypothetical protein 114225 115067 -1
CDS - ZP_01441825.1 R2601_01080 acyl-CoA synthase 115064 116677 -1