xBASE Logo
About | Contact | Home

Ruminococcaceae bacterium D16 NZ_ADDX01000009, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07633660.1 RbacD_010100000473 hypothetical protein 1 239 1
CDS - ZP_07633661.1 RbacD_010100000478 integrase family protein 753 1685 -1
CDS - ZP_07633662.1 RbacD_010100000483 RNA polymerase, sigma-24 subunit, ECF subfamily protein 1742 2236 -1
CDS - ZP_07633663.1 RbacD_010100000488 hypothetical protein 3461 4444 1
CDS - ZP_07633664.1 RbacD_010100000493 methyltransferase type 11 4956 5687 -1
CDS - ZP_07633665.1 RbacD_010100000498 translation elongation factor G 5738 7657 -1
CDS - ZP_07633666.1 RbacD_010100000503 hypothetical protein 8318 9181 1
CDS - ZP_07633667.1 RbacD_010100000508 hypothetical protein 9219 9785 1
CDS - ZP_07633668.1 RbacD_010100000513 hypothetical protein 9854 10420 1
CDS - ZP_07633669.1 RbacD_010100000518 hypothetical protein 10488 11054 1
CDS - ZP_07633670.1 RbacD_010100000523 hypothetical protein 11085 11546 1
CDS - ZP_07633671.1 RbacD_010100000528 hypothetical protein 11686 11796 1
CDS - ZP_07633672.1 RbacD_010100000533 transcriptional regulator, XRE family protein 11866 12093 -1
CDS - ZP_07633673.1 RbacD_010100000538 transcriptional regulator, XRE family protein 12278 12541 -1
CDS - ZP_07633674.1 RbacD_010100000543 hypothetical protein 12652 13122 1
CDS - ZP_07633675.1 RbacD_010100000548 site-specific recombinases, DNA invertase Pin-like protein 13731 15242 -1
CDS - ZP_07633676.1 RbacD_010100000553 hypothetical protein 15337 15492 -1
CDS - ZP_07633677.1 RbacD_010100000558 hypothetical protein 15533 16459 -1
CDS - ZP_07633678.1 RbacD_010100000563 replication initiator A domain-containing protein 16651 17046 -1
CDS - ZP_07633679.1 RbacD_010100000568 hypothetical protein 17158 17571 -1
CDS - ZP_07633680.1 RbacD_010100000573 hypothetical protein 17800 18063 1
CDS - ZP_07633681.1 RbacD_010100000578 hypothetical protein 18142 18942 1
CDS - ZP_07633682.1 RbacD_010100000583 H+ Antiporter protein 19023 20243 -1
CDS - ZP_07633683.1 RbacD_010100000588 hypothetical protein 21467 22615 1
CDS - ZP_07633684.1 RbacD_010100000593 hypothetical protein 22686 23264 1
CDS - ZP_07633685.1 RbacD_010100000598 hypothetical protein 23397 24149 1
CDS - ZP_07633686.1 RbacD_010100000603 hypothetical protein 24191 24652 1
CDS - ZP_07633687.1 RbacD_010100000608 LexA repressor 24919 25746 -1
CDS - ZP_07633688.1 RbacD_010100000613 hypothetical protein 25978 26625 1
CDS - ZP_07633689.1 RbacD_010100000618 helix-turn-helix, type 11 containing protein 27177 27494 1
CDS - ZP_07633690.1 RbacD_010100000623 helicase c2 27882 29810 1
CDS - ZP_07633691.1 RbacD_010100000628 hypothetical protein 29810 29956 1
CDS - ZP_07633692.1 RbacD_010100000633 resolvase, n-terminal:recombinase, putative 30026 31573 1
CDS - ZP_07633693.1 RbacD_010100000638 hypothetical protein 31577 32353 1
CDS - ZP_07633694.1 RbacD_010100000643 resolvase, n-terminal:recombinase, putative 32473 34014 1
CDS - ZP_07633695.1 RbacD_010100000648 hypothetical protein 34040 34789 1
CDS - ZP_07633696.1 RbacD_010100000653 transcriptional regulator, Crp/Fnr family protein 35091 35750 -1
CDS - ZP_07633697.1 RbacD_010100000658 hydroxylamine reductase 35876 37516 1
CDS - ZP_07633698.1 RbacD_010100000663 tryptophan-rich sensory protein, TSPO-like protein 37563 38036 -1
CDS - ZP_07633699.1 RbacD_010100000668 stage III sporulation protein D, SpoIIID 38194 38442 1
CDS - ZP_07633700.1 RbacD_010100000673 thymidylate synthase 38574 39404 1
CDS - ZP_07633701.1 RbacD_010100000678 dihydrofolate reductase region 39418 39897 1
CDS - ZP_07633702.1 RbacD_010100000683 hypothetical protein 39946 40359 -1
CDS - ZP_07633703.1 RbacD_010100000688 putative transcriptional regulator 40343 40576 -1
CDS - ZP_07633704.1 RbacD_010100000693 spermidine/putrescine transport ATP-binding protein PotD 41043 42155 -1
CDS - ZP_07633705.1 RbacD_010100000698 binding-protein-dependent transport systems inner membrane component 42210 43070 -1
CDS - ZP_07633706.1 RbacD_010100000703 spermidine/putrescine transport ATP-binding protein PotA 43067 43930 -1
CDS - ZP_07633707.1 RbacD_010100000708 spermidine/putrescine ABC transporter ATPase subunit 43917 45104 -1
CDS - ZP_07633708.1 RbacD_010100000713 RluA family pseudouridine synthase 45408 46391 -1
CDS - ZP_07633709.1 RbacD_010100000718 hypothetical protein 46558 47061 1
CDS - ZP_07633710.1 RbacD_010100000723 ribosomal protein L32 47110 47295 1
CDS - ZP_07633711.1 RbacD_010100000728 Hsp33-like chaperonin 47385 48263 -1
CDS - ZP_07633712.1 RbacD_010100000733 Methyltransferase type 12 48278 49048 -1
CDS - ZP_07633713.1 RbacD_010100000738 TrpR like protein, YerC/YecD 49045 49341 -1
CDS - ZP_07633714.1 RbacD_010100000743 hypothetical protein 49471 50175 1
CDS - ZP_07633715.1 RbacD_010100000748 branched-chain amino acid transport system II carrier protein 50195 51511 -1
tRNA - - RbacD_010100t01010 tRNA-Gln 51795 51868 1
CDS - ZP_07633716.1 RbacD_010100000753 hypothetical protein 52076 52690 -1
CDS - ZP_07633717.1 RbacD_010100000758 hypothetical protein 52854 53456 -1
CDS - ZP_07633718.1 RbacD_010100000763 hypothetical protein 53453 54181 -1
CDS - ZP_07633719.1 RbacD_010100000768 LacI family regulatory protein 54207 55175 -1
CDS - ZP_07633720.1 RbacD_010100000773 hypothetical protein 55215 55346 -1
CDS - ZP_07633721.1 RbacD_010100000778 sugar ABC transporter permease 55606 56544 1
CDS - ZP_07633722.1 RbacD_010100000783 sugar ABC transporter permease 56559 57446 1
CDS - ZP_07633723.1 RbacD_010100000788 extracellular solute-binding protein family 1 57463 59166 1
CDS - ZP_07633724.1 RbacD_010100000793 sucrose-6-phosphate hydrolase Scr32A 59203 60681 1
CDS - ZP_07633725.1 RbacD_010100000798 pfkB-type carbohydrate kinase family protein 60698 61657 1
CDS - ZP_07633726.1 RbacD_010100000803 transcriptional regulator, LysR family protein 61818 62669 -1
CDS - ZP_07633727.1 RbacD_010100000808 transcriptional regulator, MarR family protein 62878 63327 1
CDS - ZP_07633728.1 RbacD_010100000813 Putative ABC-type multidrug transport system, ATPase and permease components 63344 65083 1
CDS - ZP_07633729.1 RbacD_010100000818 ATP-binding cassette subfamily B protein 65101 66987 1
CDS - ZP_07633730.1 RbacD_010100000823 AraC family transcriptional regulator 67139 67999 -1
CDS - ZP_07633731.1 RbacD_010100000828 PpiC-type peptidyl-prolyl cis-trans isomerase 68500 69639 1
CDS - ZP_07633732.1 RbacD_010100000833 putative surface-anchored protein 69869 72154 1
CDS - ZP_07633733.1 RbacD_010100000838 Ig domain protein group 2 domain protein 72407 76486 1
CDS - ZP_07633734.1 RbacD_010100000843 integral membrane protein 76826 78097 -1
CDS - ZP_07633735.1 RbacD_010100000848 PadR-like family transcriptional regulator 78284 78829 1
CDS - ZP_07633736.1 RbacD_010100000853 acetyltransferase 79111 79566 -1
CDS - ZP_07633737.1 RbacD_010100000858 hypothetical protein 79858 80160 -1
tRNA - - RbacD_010100t01012 tRNA-Lys 80396 80471 -1
tRNA - - RbacD_010100t01014 tRNA-Gln 80481 80555 -1
tRNA - - RbacD_010100t01016 tRNA-His 80634 80710 -1
tRNA - - RbacD_010100t01018 tRNA-Arg 80755 80831 -1
tRNA - - RbacD_010100t01020 tRNA-Gly 80835 80908 -1
CDS - ZP_07633738.1 RbacD_010100000863 hypothetical protein 81017 82351 -1
CDS - ZP_07633739.1 RbacD_010100000868 hypothetical protein 82374 82490 -1
CDS pyrB ZP_07633740.1 RbacD_010100000873 aspartate carbamoyltransferase catalytic subunit 82635 83693 -1
CDS - ZP_07633741.1 RbacD_010100000878 hypothetical protein 83882 84433 1
CDS - ZP_07633742.1 RbacD_010100000883 PadR-like family transcriptional regulator 84469 84801 1
CDS - ZP_07633743.1 RbacD_010100000888 hypothetical protein 84798 85460 1
CDS - ZP_07633744.1 RbacD_010100000893 hypothetical protein 85515 86237 1
CDS - ZP_07633745.1 RbacD_010100000898 hypothetical protein 86250 86420 -1
CDS - ZP_07633746.1 RbacD_010100000903 translation-associated GTPase 86515 87612 -1
CDS - ZP_07633747.1 RbacD_010100000908 RNA modification enzyme, MiaB family protein 87699 88991 -1
CDS - ZP_07633748.1 RbacD_010100000913 ATPase 88988 90415 -1
CDS - ZP_07633749.1 RbacD_010100000918 hypothetical protein 90683 91561 1
CDS - ZP_07633750.1 RbacD_010100000923 NAD+ synthetase 91693 93615 1
CDS - ZP_07633751.1 RbacD_010100000928 Chromate transporter 93659 94273 1
CDS - ZP_07633752.1 RbacD_010100000933 Chromate transporter 94270 94839 1
CDS - ZP_07633753.1 RbacD_010100000938 putative Na(+)/H(+) antiporter 94908 96098 -1