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Ruminococcaceae bacterium D16 NZ_ADDX01000010, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07633767.1 RbacD_010100001020 methionyl-tRNA synthetase 31 1998 -1
CDS - ZP_07633768.1 RbacD_010100001025 hypothetical protein 2019 2867 -1
CDS - ZP_07633769.1 RbacD_010100001030 hypothetical protein 2990 3292 -1
CDS - ZP_07633770.1 RbacD_010100001035 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3295 4380 -1
CDS - ZP_07633771.1 RbacD_010100001040 anaerobic ribonucleoside triphosphate reductase 4789 6927 1
CDS - ZP_07633772.1 RbacD_010100001045 anaerobic ribonucleoside-triphosphate reductase activating protein 7086 7610 1
CDS - ZP_07633773.1 RbacD_010100001050 multidrug resistance protein, MATE family 7658 9067 -1
CDS - ZP_07633774.1 RbacD_010100001055 potassium/proton antiporter 9339 10943 -1
CDS - ZP_07633775.1 RbacD_010100001060 predicted metal-dependent hydrolase 11086 11838 -1
CDS - ZP_07633776.1 RbacD_010100001065 tRNA (uracil-5-) -methyltransferase 11897 13255 -1
CDS - ZP_07633777.1 RbacD_010100001070 formate acetyltransferase 13367 15610 -1
CDS - ZP_07633778.1 RbacD_010100001075 pyruvate formate-lyase activating enzyme 15627 16355 -1
CDS - ZP_07633779.1 RbacD_010100001080 amino acid carrier protein 16580 17998 -1
CDS - ZP_07633780.1 RbacD_010100001085 preprotein translocase subunit SecA 18527 21283 1
CDS - ZP_07633781.1 RbacD_010100001090 membrane spanning protein 21464 22216 1
CDS - ZP_07633782.1 RbacD_010100001095 hypothetical protein 22296 22688 1
CDS - ZP_07633783.1 RbacD_010100001100 GDSL family lipase 22704 23588 1
CDS - ZP_07633784.1 RbacD_010100001105 hypothetical protein 23585 24052 1
CDS - ZP_07633785.1 RbacD_010100001110 cell wall hydrolase, SleB 24216 25019 1
CDS - ZP_07633786.1 RbacD_010100001115 GTP1/OBG subdomain-containing protein 25067 26347 -1
CDS - ZP_07633787.1 RbacD_010100001120 hypothetical protein 26360 26782 -1
CDS rpmA ZP_07633788.1 RbacD_010100001125 50S ribosomal protein L27 26848 27132 -1
CDS - ZP_07633789.1 RbacD_010100001130 hypothetical protein 27136 27465 -1
CDS - ZP_07633790.1 RbacD_010100001135 50S ribosomal protein L21 27469 27780 -1
CDS - ZP_07633791.1 RbacD_010100001140 membrane bound O-acyl transferase MBOAT family protein 28038 29456 1
CDS - ZP_07633792.1 RbacD_010100001145 hypothetical protein 29470 30672 1
CDS - ZP_07633793.1 RbacD_010100001150 hypothetical protein 30719 31636 -1
CDS - ZP_07633794.1 RbacD_010100001155 metallophosphoesterase 31649 32761 -1
CDS prmA ZP_07633795.1 RbacD_010100001160 ribosomal protein L11 methyltransferase 32802 33746 -1
CDS - ZP_07633796.1 RbacD_010100001165 degV family protein 33970 34842 -1
CDS - ZP_07633797.1 RbacD_010100001170 hypothetical protein 34878 35411 -1
CDS - ZP_07633798.1 RbacD_010100001175 hypothetical protein 35506 36429 -1
CDS - ZP_07633799.1 RbacD_010100001180 peptidase S58, DmpA 36697 37677 1
CDS - ZP_07633800.1 RbacD_010100001185 hypothetical protein 37727 37954 -1
CDS - ZP_07633801.1 RbacD_010100001190 PfkB 37951 38913 -1
CDS - ZP_07633802.1 RbacD_010100001195 sodium:glactoside symporter family protein 38898 40283 -1
CDS - ZP_07633803.1 RbacD_010100001200 L-iditol 2-dehydrogenase 40285 41328 -1
CDS - ZP_07633804.1 RbacD_010100001205 ROK family protein 41518 42639 -1
CDS - ZP_07633805.1 RbacD_010100001210 pyruvate phosphate dikinase 42814 45447 -1
CDS - ZP_07633806.1 RbacD_010100001215 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 45847 46350 -1
CDS - ZP_07633807.1 RbacD_010100001220 hypothetical protein 46445 46726 1
CDS - ZP_07633808.1 RbacD_010100001225 competence/damage-inducible protein CinA 46754 48013 -1
CDS - ZP_07633809.1 RbacD_010100001230 thiamine biosynthesis/tRNA modification protein ThiI 48028 49200 -1
CDS - ZP_07633810.1 RbacD_010100001235 Mg chelatase, subunit ChlI 49279 50781 -1
CDS - ZP_07633811.1 RbacD_010100001240 pyruvate ferredoxin/flavodoxin oxidoreductase 51197 54742 1
tRNA - - RbacD_010100t01817 tRNA-Ser 54927 55015 -1
CDS - ZP_07633812.1 RbacD_010100001245 hypothetical protein 55205 55765 1
CDS - ZP_07633813.1 RbacD_010100001250 hypothetical protein 55864 56457 1
CDS - ZP_07633814.1 RbacD_010100001255 transcriptional regulator, XRE family protein 56471 56686 1
CDS - ZP_07633815.1 RbacD_010100001260 hypothetical protein 56690 57253 1
CDS - ZP_07633816.1 RbacD_010100001265 hypothetical protein 57305 57832 1
CDS - ZP_07633817.1 RbacD_010100001270 hypothetical protein 57881 58315 1
CDS - ZP_07633818.1 RbacD_010100001275 hypothetical protein 58339 58827 1
CDS - ZP_07633819.1 RbacD_010100001280 hypothetical protein 58842 59219 1
CDS - ZP_07633820.1 RbacD_010100001285 phosphoesterase 59216 60079 1
CDS - ZP_07633821.1 RbacD_010100001290 NUDIX hydrolase 60158 60994 1
CDS - ZP_07633822.1 RbacD_010100001295 hypothetical protein 61091 61366 1
CDS - ZP_07633823.1 RbacD_010100001300 sporulation protein YqfD 61377 62615 1
CDS - ZP_07633824.1 RbacD_010100001305 PhoH-like protein 62624 63604 1
CDS - ZP_07633825.1 RbacD_010100001310 putative metalloprotease 63601 64569 1
CDS - ZP_07633826.1 RbacD_010100001315 GTP-binding protein Era 64618 65514 1
CDS - ZP_07633827.1 RbacD_010100001320 hypothetical protein 65589 65738 1
CDS - ZP_07633828.1 RbacD_010100001325 DNA replication and repair protein RecO 65796 66545 1
CDS - ZP_07633829.1 RbacD_010100001330 oligoendopeptidase F 66585 68387 -1
CDS - ZP_07633830.1 RbacD_010100001335 histidinol-phosphate aminotransferase 68570 69625 1
CDS - ZP_07633831.1 RbacD_010100001340 imidazoleglycerol-phosphate dehydratase 69622 70209 1
CDS - ZP_07633832.1 RbacD_010100001345 tRNA synthetase class II (G H P and S) 70224 71303 1
CDS - ZP_07633833.1 RbacD_010100001350 ATP phosphoribosyltransferase 71300 71917 1
CDS - ZP_07633834.1 RbacD_010100001355 histidinol dehydrogenase 71926 73215 1
CDS hisH ZP_07633835.1 RbacD_010100001360 imidazole glycerol phosphate synthase subunit HisH 73212 73832 1
CDS - ZP_07633836.1 RbacD_010100001365 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 73837 74553 1
CDS - ZP_07633837.1 RbacD_010100001370 imidazoleglycerol phosphate synthase, cyclase subunit 74556 75314 1
CDS - ZP_07633838.1 RbacD_010100001375 phosphoribosyl-ATP diphosphatase 75311 75649 1
CDS - ZP_07633839.1 RbacD_010100001380 phosphoribosyl-ATP diphosphatase 75651 75980 1
CDS - ZP_07633840.1 RbacD_010100001385 histidinol phosphate phosphatase HisJ family protein 76134 76967 1
CDS - ZP_07633841.1 RbacD_010100001390 hypothetical protein 76969 77400 1
CDS - ZP_07633842.1 RbacD_010100001395 putative DNA-binding protein 77516 77920 -1
CDS - ZP_07633843.1 RbacD_010100001400 hypothetical protein 78076 79209 1
CDS rimM ZP_07633844.1 RbacD_010100001405 16S rRNA-processing protein RimM 79243 79740 -1
CDS - ZP_07633845.1 RbacD_010100001410 hypothetical protein 79815 80045 -1
CDS - ZP_07633846.1 RbacD_010100001415 30S ribosomal protein S16 80064 80303 -1
CDS - ZP_07633847.1 RbacD_010100001420 signal recognition particle protein 80374 81753 -1
CDS - ZP_07633848.1 RbacD_010100001425 putative helix-turn-helix protein YlxM/p13 family protein 81757 82122 -1
CDS - ZP_07633849.1 RbacD_010100001430 putative metalloprotease 82390 83673 1
CDS - ZP_07633850.1 RbacD_010100001435 peptidase M16 domain protein 83675 84958 1
CDS - ZP_07633851.1 RbacD_010100001440 prolipoprotein diacylglyceryl transferase 84955 85899 1
CDS - ZP_07633852.1 RbacD_010100001445 methenyltetrahydrofolate cyclohydrolase 85902 86747 1
CDS - ZP_07633853.1 RbacD_010100001450 stage III sporulation protein AA 86859 87770 1
CDS - ZP_07633854.1 RbacD_010100001455 hypothetical protein 87771 88280 1
CDS - ZP_07633855.1 RbacD_010100001460 stage III sporulation AC family protein 88311 88505 1
CDS - ZP_07633856.1 RbacD_010100001465 putative sporulation protein 88502 88894 1
CDS - ZP_07633857.1 RbacD_010100001470 stage III sporulation protein AE 88891 89955 1
CDS - ZP_07633858.1 RbacD_010100001475 hypothetical protein 89952 90443 1
CDS - ZP_07633859.1 RbacD_010100001480 hypothetical protein 90440 90949 1
CDS - ZP_07633860.1 RbacD_010100001485 hypothetical protein 90987 91619 1
CDS - ZP_07633861.1 RbacD_010100001490 hypothetical protein 91721 92095 1
CDS - ZP_07633862.1 RbacD_010100001495 signal transduction histidine kinase regulating citrate/malate metabolism 92191 93798 1
CDS - ZP_07633863.1 RbacD_010100001500 response regulator receiver and unknown domain protein 93795 94505 1
CDS - ZP_07633864.1 RbacD_010100001505 sodium/glutamate symporter 94791 96056 1
CDS - ZP_07633865.1 RbacD_010100001510 immunogenic protein (bcsp31-2) 96252 97208 1