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Ruminococcaceae bacterium D16 NZ_ADDX01000012, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07633990.1 RbacD_010100002139 ABC transporter related protein 15 1640 -1
CDS - ZP_07633991.1 RbacD_010100002144 binding-protein-dependent transport systems inner membrane component 1644 3473 -1
CDS - ZP_07633992.1 RbacD_010100002149 putative lipoprotein 3613 4983 -1
CDS - ZP_07633993.1 RbacD_010100002154 iron ABC transporter substrate-binding protein 5286 6221 1
CDS - ZP_07633994.1 RbacD_010100002159 integral membrane sensor signal transduction histidine kinase 6230 7930 1
CDS - ZP_07633995.1 RbacD_010100002164 two component transcriptional regulator, AraC family protein 7930 8667 1
CDS - ZP_07633996.1 RbacD_010100002169 Peroxiredoxin 8713 9171 -1
CDS - ZP_07633997.1 RbacD_010100002174 hypothetical protein 9177 9926 -1
CDS - ZP_07633998.1 RbacD_010100002179 hypothetical protein 10007 10411 -1
CDS - ZP_07633999.1 RbacD_010100002184 hypothetical protein 10574 11566 1
CDS murC ZP_07634000.1 RbacD_010100002189 UDP-N-acetylmuramate--L-alanine ligase 11631 13001 -1
CDS - ZP_07634001.1 RbacD_010100002194 hypothetical protein 13166 13798 -1
CDS - ZP_07634002.1 RbacD_010100002199 ATP-dependent DNA helicase PcrA 14127 16592 1
CDS - ZP_07634003.1 RbacD_010100002204 XRE family transcriptional regulator 16712 17953 1
CDS - ZP_07634004.1 RbacD_010100002209 hypothetical protein 17950 18444 1
CDS - ZP_07634005.1 RbacD_010100002214 hypothetical protein 18491 19429 -1
CDS - ZP_07634006.1 RbacD_010100002219 hypothetical protein 19505 20461 -1
CDS - ZP_07634007.1 RbacD_010100002224 transcriptional regulator, XRE family protein 20454 20633 -1
CDS - ZP_07634008.1 RbacD_010100002229 hypothetical protein 20689 21630 -1
CDS - ZP_07634009.1 RbacD_010100002234 argininosuccinate synthase 21934 23151 1
CDS - ZP_07634010.1 RbacD_010100002239 argininosuccinate lyase 23315 24703 1
CDS - ZP_07634011.1 RbacD_010100002244 N-acetyl-gamma-glutamyl-phosphate reductase 24740 25741 1
CDS - ZP_07634012.1 RbacD_010100002249 acetylglutamate kinase 25780 26637 1
CDS - ZP_07634013.1 RbacD_010100002254 ornithine carbamoyltransferase 26663 27583 1
tRNA - - RbacD_010100t04401 tRNA-Ala 27724 27799 1
CDS - ZP_07634014.1 RbacD_010100002259 hypothetical protein 27897 28985 1
CDS - ZP_07634015.1 RbacD_010100002264 hypothetical protein 29027 29239 -1
CDS - ZP_07634016.1 RbacD_010100002269 sporulation integral membrane protein YlbJ 29273 30454 -1
CDS - ZP_07634017.1 RbacD_010100002274 hypothetical protein 30744 31382 -1
tRNA - - RbacD_010100t04403 tRNA-Pro 31756 31832 -1
CDS - ZP_07634018.1 RbacD_010100002294 Peptidoglycan-binding domain 1 protein 33797 34195 -1
CDS - ZP_07634019.1 RbacD_010100002299 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 34374 35381 -1
CDS - ZP_07634020.1 RbacD_010100002304 hypothetical protein 35467 36123 -1
CDS engA ZP_07634021.1 RbacD_010100002309 GTP-binding protein EngA 36127 37452 -1
CDS - ZP_07634022.1 RbacD_010100002314 hypothetical protein 37495 38925 -1
CDS - ZP_07634023.1 RbacD_010100002319 hypothetical protein 39259 40899 1
CDS - ZP_07634024.1 RbacD_010100002324 hypothetical protein 41009 42610 1
CDS - ZP_07634025.1 RbacD_010100002329 glycosyl transferase family 2 42615 43574 1
CDS - ZP_07634026.1 RbacD_010100002334 hypothetical protein 43564 44004 1
CDS - ZP_07634027.1 RbacD_010100002339 hypothetical protein 44063 44833 -1
CDS - ZP_07634028.1 RbacD_010100002344 biotin synthase related domain-containing protein 44830 46125 -1
CDS - ZP_07634029.1 RbacD_010100002349 mechanosensitive ion channel family protein 46233 47054 -1
CDS - ZP_07634030.1 RbacD_010100002354 DtxR family transcriptional regulator 47130 47504 -1
CDS - ZP_07634031.1 RbacD_010100002359 hypothetical protein 47578 48498 -1
CDS - ZP_07634032.1 RbacD_010100002364 3-methyladenine DNA glycosylase 48591 49202 1
CDS - ZP_07634033.1 RbacD_010100002369 hydrolyase 49189 49854 1
CDS - ZP_07634034.1 RbacD_010100002374 hypothetical protein 49857 50651 1
CDS - ZP_07634035.1 RbacD_010100002379 response regulator receiver/ANTAR domain-containing protein 50701 51327 -1
CDS - ZP_07634036.1 RbacD_010100002384 L-glutamine synthetase 51354 52571 -1
CDS - ZP_07634037.1 RbacD_010100002389 glutamine synthetase, catalytic region 52890 54989 1
CDS asnB ZP_07634038.1 RbacD_010100002394 asparagine synthetase B 55008 56585 1
CDS - ZP_07634039.1 RbacD_010100002399 amidophosphoribosyltransferase 56617 58056 1
CDS pyrG ZP_07634040.1 RbacD_010100002404 CTP synthetase 58076 59686 1
CDS - ZP_07634041.1 RbacD_010100002409 undecaprenyl pyrophosphate phosphatase 59736 60587 -1
CDS - ZP_07634042.1 RbacD_010100002414 biotin synthase 60869 61837 1
CDS - ZP_07634043.1 RbacD_010100002419 hypothetical protein 61841 61963 -1
CDS - ZP_07634044.1 RbacD_010100002424 hypothetical protein 62345 62716 1
CDS - ZP_07634045.1 RbacD_010100002429 hypothetical protein 62903 63550 1
CDS - ZP_07634046.1 RbacD_010100002434 hypothetical protein 63673 64005 1
CDS - ZP_07634047.1 RbacD_010100002439 MutT-like protein 64088 64435 1
CDS - ZP_07634048.1 RbacD_010100002444 DNA polymerase III subunit epsilon 64432 65019 1
CDS - ZP_07634049.1 RbacD_010100002449 MOP/MATE family multidrug-resistance efflux pumpNorM 65008 66399 -1
CDS - ZP_07634050.1 RbacD_010100002454 hypothetical protein 66581 66706 1
CDS - ZP_07634051.1 RbacD_010100002459 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 66905 67696 -1
CDS - ZP_07634052.1 RbacD_010100002464 galactoside transport system permease protein mglC homolog 67866 69518 -1
CDS - ZP_07634053.1 RbacD_010100002469 galactoside ABC transporter, ATP-binding protein 69534 71000 -1
CDS - ZP_07634054.1 RbacD_010100002474 galactose/glucose-binding lipoprotein 71244 72536 -1
CDS - ZP_07634055.1 RbacD_010100002479 periplasmic binding protein/LacI transcriptional regulator 72713 73693 -1
CDS - ZP_07634056.1 RbacD_010100002484 histidine kinase internal region 73680 75398 -1
CDS - ZP_07634057.1 RbacD_010100002489 two component AraC family transcriptional regulator 75395 76678 -1
CDS - ZP_07634058.1 RbacD_010100002494 hypothetical protein 76758 77318 -1
CDS - ZP_07634059.1 RbacD_010100002499 hypothetical protein 77573 78088 1
CDS codB ZP_07634060.1 RbacD_010100002504 cytosine permease 78377 79618 1
CDS - ZP_07634061.1 RbacD_010100002509 N-isopropylammelide isopropylaminohydrolase 79646 80884 1
CDS - ZP_07634062.1 RbacD_010100002514 isopentenyl-diphosphate delta-isomerase 80962 82662 -1
CDS - ZP_07634063.1 RbacD_010100002519 hypothetical protein 82687 82851 -1
CDS - ZP_07634064.1 RbacD_010100002524 putative transcriptional regulator 83007 83591 1
CDS - ZP_07634065.1 RbacD_010100002529 myosin-cross-reactive antigen 83714 85687 1
CDS - ZP_07634066.1 RbacD_010100002534 transcriptional regulator, TetR family protein 85811 86431 1
CDS - ZP_07634067.1 RbacD_010100002539 hypothetical protein 86651 87136 1
CDS - ZP_07634068.1 RbacD_010100002544 hypothetical protein 87228 87656 -1
CDS - ZP_07634069.1 RbacD_010100002549 hypothetical protein 87953 89197 1
CDS - ZP_07634070.1 RbacD_010100002554 hypothetical protein 89222 90463 1
CDS - ZP_07634071.1 RbacD_010100002559 carboxymuconolactone decarboxylase 90539 91288 -1
CDS - ZP_07634072.1 RbacD_010100002564 hypothetical protein 91300 91803 -1
CDS - ZP_07634073.1 RbacD_010100002569 alpha/beta family hydrolase 91827 92801 -1
CDS - ZP_07634074.1 RbacD_010100002574 NADPH-dependent FMN reductase 92816 93355 -1
CDS - ZP_07634075.1 RbacD_010100002579 hypothetical protein 93352 93933 -1
CDS - ZP_07634076.1 RbacD_010100002584 transcriptional regulator, LysR family protein 94076 95008 1
CDS - ZP_07634077.1 RbacD_010100002589 peptidase M20 95227 96888 1
CDS - ZP_07634078.1 RbacD_010100002594 exoenzyme regulatory protein aepA precursor 97158 98600 1
CDS - ZP_07634079.1 RbacD_010100002599 putative cytoplasmic protein 98611 99768 1
CDS - ZP_07634080.1 RbacD_010100002604 sodium:alanine symporter family protein 99910 101301 1
CDS - ZP_07634081.1 RbacD_010100002609 riboflavin biosynthesis protein 101761 102867 1
CDS - ZP_07634082.1 RbacD_010100002614 riboflavin synthase, alpha subunit 102848 103495 1
CDS - ZP_07634083.1 RbacD_010100002619 riboflavin biosynthesis; GTP-cyclohydrolase II 103520 104722 1
CDS ribH ZP_07634084.1 RbacD_010100002624 6,7-dimethyl-8-ribityllumazine synthase 104759 105226 1
CDS - ZP_07634085.1 RbacD_010100002629 predicted phosphatase 105229 105909 1
CDS - ZP_07634086.1 RbacD_010100002634 putative flavoredoxin 105972 106532 -1
CDS - ZP_07634087.1 RbacD_010100002639 exonuclease SbcD 106770 107909 1