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Ruminococcaceae bacterium D16 NZ_ADDX01000034, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07635325.1 RbacD_010100008865 MATE efflux family protein 29 1402 -1
tRNA - - RbacD_010100t09812 tRNA-Leu 1498 1584 -1
CDS - ZP_07635326.1 RbacD_010100008870 hypothetical protein 1664 2038 -1
CDS - ZP_07635327.1 RbacD_010100008875 O-acetylhomoserine sulfhydrolase 2104 3387 -1
CDS - ZP_07635328.1 RbacD_010100008880 hypothetical protein 3482 3973 -1
CDS - ZP_07635329.1 RbacD_010100008885 histidine kinase 3970 5472 -1
CDS - ZP_07635330.1 RbacD_010100008890 two component transcriptional regulator 5497 6198 -1
CDS - ZP_07635331.1 RbacD_010100008895 competence protein ComEA helix-hairpin-helix repeat protein 6216 6614 -1
CDS - ZP_07635332.1 RbacD_010100008900 D-alanyl-D-alanine carboxypeptidase 6750 8111 1
CDS - ZP_07635333.1 RbacD_010100008905 aldose 1-epimerase 8158 9189 -1
CDS - ZP_07635334.1 RbacD_010100008910 aIF-2BI family translation initiation factor 9225 10268 -1
CDS - ZP_07635335.1 RbacD_010100008915 class II aldolase/adducin family protein 10261 10968 -1
CDS - ZP_07635336.1 RbacD_010100008920 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein 10965 11798 -1
CDS - ZP_07635337.1 RbacD_010100008925 hypothetical protein 11843 12133 -1
CDS - ZP_07635338.1 RbacD_010100008930 hypothetical protein 12149 12571 -1
CDS - ZP_07635339.1 RbacD_010100008935 integrase family protein 12646 13779 -1
CDS - ZP_07635340.1 RbacD_010100008940 hypothetical protein 14209 15795 1
CDS - ZP_07635341.1 RbacD_010100008945 Uracil-DNA glycosylase 15853 16422 -1
CDS - ZP_07635342.1 RbacD_010100008950 cell division protein MraZ 16763 17176 1
CDS mraW ZP_07635343.1 RbacD_010100008955 S-adenosyl-methyltransferase MraW 17183 18166 1
CDS - ZP_07635344.1 RbacD_010100008960 hypothetical protein 18163 18729 1
CDS - ZP_07635345.1 RbacD_010100008965 peptidoglycan glycosyltransferase 18822 21272 1
CDS - ZP_07635346.1 RbacD_010100008970 UDP-N-acetylmuramyl-tripeptide synthetase 21394 22821 1
CDS mraY ZP_07635347.1 RbacD_010100008975 phospho-N-acetylmuramoyl-pentapeptide- transferase 22890 23879 1
CDS - ZP_07635348.1 RbacD_010100008980 cell division protein FtsW 23954 25156 1
CDS murG ZP_07635349.1 RbacD_010100008985 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 25190 26311 1
CDS - ZP_07635350.1 RbacD_010100008990 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 26372 27712 1
CDS - ZP_07635351.1 RbacD_010100008995 cell division protein FtsQ 27702 28490 1
CDS - ZP_07635352.1 RbacD_010100009000 cell division protein FtsZ 28634 29785 1
CDS - ZP_07635353.1 RbacD_010100009005 hypothetical protein 30099 30677 1
CDS - ZP_07635354.1 RbacD_010100009010 hypothetical protein 30824 31651 -1
CDS - ZP_07635355.1 RbacD_010100009015 hypothetical protein 31773 32174 -1
CDS - ZP_07635356.1 RbacD_010100009020 uracil-xanthine permease 32350 33714 -1
CDS - ZP_07635357.1 RbacD_010100009025 diaminopimelate decarboxylase 34048 35307 1
CDS - ZP_07635358.1 RbacD_010100009030 LrgA family protein 35394 35756 1
CDS - ZP_07635359.1 RbacD_010100009035 LrgB family protein 35756 36433 1
CDS - ZP_07635360.1 RbacD_010100009040 phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase 36578 37768 -1
CDS - ZP_07635361.1 RbacD_010100009045 transcriptional activator, Baf family protein 37976 38743 1
CDS - ZP_07635362.1 RbacD_010100009050 hypothetical protein 39773 39907 1
CDS - ZP_07635363.1 RbacD_010100009055 phosphoribosyltransferase 39904 40563 1
CDS - ZP_07635364.1 RbacD_010100009060 rod shape-determining protein Mbl 40710 41744 1
CDS - ZP_07635365.1 RbacD_010100009065 transcriptional regulator, LysR family protein 42210 43091 -1
CDS argC ZP_07635366.1 RbacD_010100009070 N-acetyl-gamma-glutamyl-phosphate reductase 43316 44389 1
CDS argJ ZP_07635367.1 RbacD_010100009075 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 44434 45657 1
CDS - ZP_07635368.1 RbacD_010100009080 acetylglutamate kinase 45673 46554 1
CDS - ZP_07635369.1 RbacD_010100009085 acetylornithine aminotransferase 46630 47853 1
CDS - ZP_07635370.1 RbacD_010100009090 Na+/H+ antiporter NhaC 48070 49560 1
CDS - ZP_07635371.1 RbacD_010100009095 alanine racemase domain protein 49587 50681 1
CDS - ZP_07635372.1 RbacD_010100009100 transcription elongation factor GreA 50729 51232 1
CDS - ZP_07635373.1 RbacD_010100009105 zinc transporter ZupT 51378 52169 1
CDS - ZP_07635374.1 RbacD_010100009110 hypothetical protein 52350 52853 1
CDS - ZP_07635375.1 RbacD_010100009115 6-carboxyhexanoate--CoA ligase 52856 53596 1
CDS - ZP_07635376.1 RbacD_010100009120 8-amino-7-oxononanoate synthase 53593 54762 1
CDS - ZP_07635377.1 RbacD_010100009125 dethiobiotin synthase 54777 55460 1
CDS - ZP_07635378.1 RbacD_010100009130 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase 55479 56666 1
CDS - ZP_07635379.1 RbacD_010100009135 hypothetical protein 56711 57484 -1
CDS - ZP_07635380.1 RbacD_010100009140 rubredoxin-type Fe(Cys)4 protein 57673 57828 -1
CDS - ZP_07635381.1 RbacD_010100009145 rubrerythrin 57854 58396 -1
CDS - ZP_07635382.1 RbacD_010100009150 ferric uptake regulator, Fur family protein 58393 58812 -1
CDS - ZP_07635383.1 RbacD_010100009155 hypothetical protein 58931 59617 -1
CDS - ZP_07635384.1 RbacD_010100009160 asparagine synthetase AsnA 59786 60799 -1
CDS - ZP_07635385.1 RbacD_010100009165 exodeoxyribonuclease 60983 61741 1
CDS - ZP_07635386.1 RbacD_010100009170 5-nitroimidazole antibiotic resistance protein 61755 62228 1
CDS - ZP_07635387.1 RbacD_010100009175 Gamma-glutamyltransferase 62242 63870 1
CDS - ZP_07635388.1 RbacD_010100009180 5,10-methylenetetrahydrofolate reductase 64300 65169 1
CDS - ZP_07635389.1 RbacD_010100009185 5-methyltetrahydrofolate--homocysteine methyltransferase 65185 65862 1
CDS - ZP_07635390.1 RbacD_010100009190 5-methyltetrahydrofolate--homocysteine methyltransferase 65840 68233 1
CDS - ZP_07635391.1 RbacD_010100009195 glycoside hydrolase family protein 68361 69224 1
CDS - ZP_07635392.1 RbacD_010100009200 hypothetical protein 69274 70353 -1
CDS pheT ZP_07635393.1 RbacD_010100009205 phenylalanyl-tRNA synthetase subunit beta 70590 73280 -1
CDS - ZP_07635394.1 RbacD_010100009210 phenylalanyl-tRNA synthetase, alpha subunit 73350 74375 -1
CDS - ZP_07635395.1 RbacD_010100009215 putative polysaccharide deacetylase 74441 75226 -1
CDS - ZP_07635396.1 RbacD_010100009220 ABC transporter related protein 75796 76524 1
CDS - ZP_07635397.1 RbacD_010100009225 SufBD protein 76549 77466 1
CDS - ZP_07635398.1 RbacD_010100009230 carbohydrate kinase, YjeF related protein 77562 79247 1
CDS - ZP_07635399.1 RbacD_010100009235 hypothetical protein 79272 79853 1
CDS - ZP_07635400.1 RbacD_010100009240 alanine racemase 79868 80986 1
CDS - ZP_07635401.1 RbacD_010100009245 transcriptional modulator of MazE/toxin, MazF 81185 81556 1
CDS - ZP_07635402.1 RbacD_010100009250 hypothetical protein 81623 82132 1
CDS - ZP_07635403.1 RbacD_010100009255 cation efflux pump (multidrug resistance protein) 82251 83621 -1
CDS - ZP_07635404.1 RbacD_010100009260 anti-sigma-factor antagonist 83870 84175 1
CDS - ZP_07635405.1 RbacD_010100009265 anti-sigma F factor 84190 84627 1
CDS - ZP_07635406.1 RbacD_010100009270 sporulation sigma factor SigF 84624 85343 1
CDS - ZP_07635407.1 RbacD_010100009275 hypothetical protein 85412 85612 1
CDS - ZP_07635408.1 RbacD_010100009280 two component transcriptional regulator 85690 86394 -1
CDS - ZP_07635409.1 RbacD_010100009285 integral membrane sensor signal transduction histidine kinase 86387 87565 -1
CDS pyrE ZP_07635410.1 RbacD_010100009290 orotate phosphoribosyltransferase 87783 88457 1
CDS - ZP_07635411.1 RbacD_010100009295 DNA repair protein RadC 88649 89338 1
CDS - ZP_07635412.1 RbacD_010100009300 excinuclease ABC subunit B 89449 91419 1
CDS - ZP_07635413.1 RbacD_010100009305 YbaK family protein 91452 91943 1
CDS - ZP_07635414.1 RbacD_010100009310 hypothetical protein 91968 92840 1
CDS - ZP_07635415.1 RbacD_010100009315 excinuclease ABC subunit A 92887 95721 1
CDS - ZP_07635416.1 RbacD_010100009320 hypothetical protein 95811 96359 1
CDS - ZP_07635417.1 RbacD_010100009325 putative small multi-drug export 96378 96866 1
CDS - ZP_07635418.1 RbacD_010100009330 hypothetical protein 96913 97254 1
CDS - ZP_07635419.1 RbacD_010100009335 ATP-dependent RecD/TraA family DNA helicase 97276 99480 1
CDS - ZP_07635420.1 RbacD_010100009340 hypothetical protein 99695 100174 1
CDS - ZP_07635421.1 RbacD_010100009345 hypothetical protein 100171 101070 1
CDS - ZP_07635422.1 RbacD_010100009350 glutaminyl-tRNA synthetase 101131 102837 -1
CDS - ZP_07635423.1 RbacD_010100009355 5-nitroimidazole resistance protein NimA 103031 103528 1