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Ruminococcaceae bacterium D16 NZ_ADDX01000043, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07635840.1 RbacD_010100011454 Extracellular ligand-binding receptor 1 784 1
CDS - ZP_07635841.1 RbacD_010100011459 inner-membrane translocator 945 1829 1
CDS - ZP_07635842.1 RbacD_010100011464 inner-membrane translocator 1842 2993 1
CDS - ZP_07635843.1 RbacD_010100011469 ABC transporter related protein 2990 3841 1
CDS - ZP_07635844.1 RbacD_010100011474 ABC transporter related protein 3828 4523 1
CDS - ZP_07635845.1 RbacD_010100011479 lactoylglutathione lyase 4564 4932 -1
CDS - ZP_07635846.1 RbacD_010100011484 GTP-binding protein LepA 4947 6755 -1
CDS - ZP_07635847.1 RbacD_010100011489 hypothetical protein 6801 7505 -1
CDS - ZP_07635848.1 RbacD_010100011494 phosphate acetyltransferase 7799 8779 1
CDS - ZP_07635849.1 RbacD_010100011499 hypothetical protein 8856 9389 -1
CDS - ZP_07635850.1 RbacD_010100011504 ACT domain-containing protein 9562 9996 -1
CDS - ZP_07635851.1 RbacD_010100011509 phenylacetyl-CoA ligase PaaK 10009 11310 -1
CDS - ZP_07635852.1 RbacD_010100011514 indolepyruvate ferredoxin oxidoreductase beta subunit IorB 11491 12063 -1
CDS - ZP_07635853.1 RbacD_010100011519 indolepyruvate ferredoxin oxidoreductase alpha subunit IorA 12068 13807 -1
CDS - ZP_07635854.1 RbacD_010100011524 hypothetical protein 13832 14137 -1
CDS - ZP_07635855.1 RbacD_010100011529 polynucleotide phosphorylase/polyadenylase 14406 16556 -1
CDS rpsO ZP_07635856.1 RbacD_010100011534 30S ribosomal protein S15 16878 17144 -1
CDS - ZP_07635857.1 RbacD_010100011539 hypothetical protein 17411 17758 -1
CDS - ZP_07635858.1 RbacD_010100011544 DNA polymerase III subunits gamma and tau 17783 19597 -1
tRNA - - RbacD_010100t12031 tRNA-Ala 20075 20150 1
CDS - ZP_07635859.1 RbacD_010100011549 S-layer domain protein 20455 23409 1
CDS - ZP_07635860.1 RbacD_010100011554 von Willebrand factor, type A 23941 25314 -1
CDS - ZP_07635861.1 RbacD_010100011559 hypothetical protein 25465 25827 1
CDS - ZP_07635862.1 RbacD_010100011564 Rieske family iron-sulfur cluster-binding protein 26097 27542 1
CDS - ZP_07635863.1 RbacD_010100011569 hypothetical protein 27633 28076 -1
CDS - ZP_07635864.1 RbacD_010100011574 hypothetical protein 28157 28912 1
CDS - ZP_07635865.1 RbacD_010100011579 hypothetical protein 29417 29647 -1
CDS - ZP_07635866.1 RbacD_010100011584 hypothetical protein 29681 29947 -1
CDS - ZP_07635867.1 RbacD_010100011589 periplasmic [Fe] hydrogenase 1 30396 32390 1
CDS - ZP_07635868.1 RbacD_010100011594 putative demethylmenaquinone methyltransferase 32534 33214 -1
CDS - ZP_07635869.1 RbacD_010100011599 LysR family transcriptional regulator 33331 34254 1
CDS - ZP_07635870.1 RbacD_010100011604 class I and II aminotransferase 34251 35432 -1
CDS - ZP_07635871.1 RbacD_010100011609 sodium:dicarboxylate symporter 35854 37185 1
CDS - ZP_07635872.1 RbacD_010100011614 allophanate hydrolase subunit 1 37272 37994 1
CDS - ZP_07635873.1 RbacD_010100011619 urea amidolyase related protein 37997 39082 1
CDS - ZP_07635874.1 RbacD_010100011624 LamB/YcsF family protein 39101 39859 1
CDS - ZP_07635875.1 RbacD_010100011629 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 40007 40972 -1
CDS - ZP_07635876.1 RbacD_010100011634 carbohydrate diacid regulator 41093 42241 1
CDS - ZP_07635877.1 RbacD_010100011639 transcriptional regulator, LysR family protein 42350 43276 1
CDS - ZP_07635878.1 RbacD_010100011644 L-glutaminase 43410 44339 1
CDS - ZP_07635879.1 RbacD_010100011649 amino acid carrier protein 44361 45785 1
CDS - ZP_07635880.1 RbacD_010100011654 hypothetical protein 45970 46812 1
CDS - ZP_07635881.1 RbacD_010100011659 ABC-type transport system ATP-binding protein (probable substrate cobalt) 46799 48505 1
CDS - ZP_07635882.1 RbacD_010100011664 cobalt transport protein 48506 49345 1
CDS - ZP_07635883.1 RbacD_010100011669 PHP domain protein 49363 50160 1
CDS - ZP_07635884.1 RbacD_010100011674 transcriptional regulator, RpiR family protein 50181 50999 1
CDS - ZP_07635885.1 RbacD_010100011679 ethanolamine utilization protein EutH 51046 52128 -1
CDS - ZP_07635886.1 RbacD_010100011684 gamma-glutamyltranspeptidase 52212 53939 -1
CDS - ZP_07635887.1 RbacD_010100011689 Sodium/proline symporter 53995 55374 -1
CDS - ZP_07635888.1 RbacD_010100011694 transcriptional regulator, AraC family protein 55556 56335 -1
CDS - ZP_07635889.1 RbacD_010100011699 putative nicotinamidase-related amidohydrolase 56606 57328 1
CDS - ZP_07635890.1 RbacD_010100011704 hypothetical protein 57370 57723 -1
CDS - ZP_07635891.1 RbacD_010100011709 hypothetical protein 57739 58104 -1
CDS - ZP_07635892.1 RbacD_010100011714 FAD-dependent pyridine nucleotide-disulphide oxidoreductase 58101 59369 -1
CDS - ZP_07635893.1 RbacD_010100011719 dehydrogenase 59391 60830 -1
CDS - ZP_07635894.1 RbacD_010100011724 glycerol kinase 60832 62349 -1
CDS - ZP_07635895.1 RbacD_010100011729 transcriptional regulator, DeoR family protein 62639 63376 1
CDS - ZP_07635896.1 RbacD_010100011734 citrate transporter 63605 64876 1
CDS - ZP_07635897.1 RbacD_010100011739 tartrate dehydratase subunit alpha 64904 65803 1
CDS - ZP_07635898.1 RbacD_010100011744 L(+)-tartrate dehydratase subunit beta 65803 66435 1
CDS - ZP_07635899.1 RbacD_010100011749 putative GntR-family transcriptional regulator 66636 67253 1
CDS - ZP_07635900.1 RbacD_010100011754 putative regulatory protein, gntR family 67250 67921 1
CDS - ZP_07635901.1 RbacD_010100011759 putative ADP-ribose pyrophosphatase 68297 68953 1
CDS - ZP_07635902.1 RbacD_010100011764 hypothetical protein 68950 70521 -1
CDS - ZP_07635903.1 RbacD_010100011769 putative esterase 70621 71487 -1
CDS - ZP_07635904.1 RbacD_010100011774 hypothetical protein 71768 71944 -1
CDS - ZP_07635905.1 RbacD_010100011779 hypothetical protein 71943 73382 1
CDS - ZP_07635906.1 RbacD_010100011784 hypothetical protein 73453 74682 -1
CDS - ZP_07635907.1 RbacD_010100011789 tRNA-dihydrouridine synthase 74824 75795 1
CDS - ZP_07635908.1 RbacD_010100011794 ECF subfamily RNA polymerase sigma-24 factor 75892 76503 1
CDS - ZP_07635909.1 RbacD_010100011799 anti-sigma(W) factor 76503 77390 1
CDS - ZP_07635910.1 RbacD_010100011804 elongation factor G 77654 79726 1
CDS - ZP_07635911.1 RbacD_010100011809 anaerobic ribonucleoside triphosphate reductase NrdD2 80259 82640 -1
CDS - ZP_07635912.1 RbacD_010100011814 chloride channel protein EriC 82820 84079 -1
CDS - ZP_07635913.1 RbacD_010100011819 hypothetical protein 84330 85205 1
CDS - ZP_07635914.1 RbacD_010100011824 Cof-like hydrolase 85380 86153 1
CDS - ZP_07635915.1 RbacD_010100011829 putative exonuclease of the beta-lactamase fold involved in RNA processing 86242 87840 1
CDS - ZP_07635916.1 RbacD_010100011834 hypothetical protein 87873 88775 1
CDS - ZP_07635917.1 RbacD_010100011839 magnesium transporter 89230 90582 1
CDS - ZP_07635918.1 RbacD_010100011844 hypothetical protein 90651 90845 -1
CDS - ZP_07635919.1 RbacD_010100011849 Dak phosphatase 91349 91969 1
CDS - ZP_07635920.1 RbacD_010100011854 Glycerone kinase 92009 93010 1
CDS - ZP_07635921.1 RbacD_010100011859 aldolase 93023 93904 1
CDS - ZP_07635922.1 RbacD_010100011864 hypothetical protein 93935 94255 1
CDS - ZP_07635923.1 RbacD_010100011869 transcription regulator 94389 95327 1
CDS - ZP_07635924.1 RbacD_010100011874 glycosyl transferase family 2 95693 96976 1
CDS - ZP_07635925.1 RbacD_010100011879 hypothetical protein 97023 97892 -1
CDS - ZP_07635926.1 RbacD_010100011884 transcriptional regulator/sugar kinase 97957 98955 -1
CDS - ZP_07635927.1 RbacD_010100011889 L-fucose isomerase-like protein 99159 100631 -1
CDS - ZP_07635928.1 RbacD_010100011894 hypothetical protein 100664 101299 -1
CDS - ZP_07635929.1 RbacD_010100011899 hypothetical protein 101311 101985 -1
CDS - ZP_07635930.1 RbacD_010100011904 hypothetical protein 101982 102227 -1
CDS - ZP_07635931.1 RbacD_010100011909 xylulokinase 102249 103724 -1
CDS - ZP_07635932.1 RbacD_010100011914 inner-membrane translocator 103757 104929 -1
CDS - ZP_07635933.1 RbacD_010100011919 ABC transporter related protein 104957 106510 -1
CDS - ZP_07635934.1 RbacD_010100011924 sugar ABC transporter substrate-binding protein 106616 107497 -1
CDS - ZP_07635935.1 RbacD_010100011929 chromosome partitioning protein parA 108074 108895 1
CDS - ZP_07635936.1 RbacD_010100011934 parB-like partition protein 108852 109778 1
CDS - ZP_07635937.1 RbacD_010100011939 hypothetical protein 109791 110066 1
CDS - ZP_07635938.1 RbacD_010100011944 hypothetical protein 110096 110281 1