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Ruminococcaceae bacterium D16 NZ_ADDX01000061, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07636349.1 RbacD_010100014018 hypothetical protein 74 412 -1
CDS - ZP_07636350.1 RbacD_010100014023 tRNA modification GTPase TrmE 436 1809 1
CDS - ZP_07636351.1 RbacD_010100014028 XRE family transcriptional regulator 1852 2802 1
CDS - ZP_07636352.1 RbacD_010100014033 stage II sporulation protein D 2855 3898 -1
CDS - ZP_07636353.1 RbacD_010100014038 metallophosphoesterase 4053 4841 1
CDS - ZP_07636354.1 RbacD_010100014043 metallophosphoesterase 5075 6166 1
CDS - ZP_07636355.1 RbacD_010100014048 hypothetical protein 6163 8355 1
CDS - ZP_07636356.1 RbacD_010100014053 signal peptidase I 9086 9688 1
CDS - ZP_07636357.1 RbacD_010100014058 putative endoribonuclease L-PSP 9809 10186 1
CDS - ZP_07636358.1 RbacD_010100014063 preprotein translocase subunit SecG 10378 10611 1
CDS rplQ ZP_07636359.1 RbacD_010100014068 50S ribosomal protein L17 10755 11099 -1
CDS - ZP_07636360.1 RbacD_010100014073 DNA-directed RNA polymerase subunit alpha 11553 12503 -1
CDS - ZP_07636361.1 RbacD_010100014078 30S ribosomal protein S4 12632 13234 -1
CDS - ZP_07636362.1 RbacD_010100014083 30S ribosomal protein S11 13261 13665 -1
CDS rpsM ZP_07636363.1 RbacD_010100014088 30S ribosomal protein S13 13679 14047 -1
CDS rpmJ ZP_07636364.1 RbacD_010100014093 50S ribosomal protein L36 14066 14179 -1
CDS - ZP_07636365.1 RbacD_010100014098 translation initiation factor IF-1 14425 14643 -1
CDS - ZP_07636366.1 RbacD_010100014103 hypothetical protein 14630 14917 -1
CDS - ZP_07636367.1 RbacD_010100014108 methionine aminopeptidase 14910 15674 -1
CDS adk ZP_07636368.1 RbacD_010100014113 adenylate kinase 15686 16324 -1
CDS - ZP_07636369.1 RbacD_010100014118 preprotein translocase, SecY subunit 16340 17704 -1
CDS rplO ZP_07636370.1 RbacD_010100014123 50S ribosomal protein L15 17705 18145 -1
CDS - ZP_07636371.1 RbacD_010100014128 50S ribosomal protein L30 18164 18346 -1
CDS - ZP_07636372.1 RbacD_010100014133 30S ribosomal protein S5 18360 18860 -1
CDS rplR ZP_07636373.1 RbacD_010100014138 50S ribosomal protein L18 18878 19237 -1
CDS - ZP_07636374.1 RbacD_010100014143 50S ribosomal protein L6P 19255 19800 -1
CDS rpsH ZP_07636375.1 RbacD_010100014148 30S ribosomal protein S8 19815 20213 -1
CDS - ZP_07636376.1 RbacD_010100014153 30S ribosomal protein S14 20722 20907 -1
CDS - ZP_07636377.1 RbacD_010100014158 ribosomal protein L5 20922 21473 -1
CDS - ZP_07636378.1 RbacD_010100014163 ribosomal protein L24 21492 21806 -1
CDS rplN ZP_07636379.1 RbacD_010100014168 50S ribosomal protein L14 21822 22190 -1
CDS - ZP_07636380.1 RbacD_010100014173 ribosomal protein S17 22203 22463 -1
CDS - ZP_07636381.1 RbacD_010100014178 LSU ribosomal protein L29P 22479 22676 -1
CDS rplP ZP_07636382.1 RbacD_010100014183 50S ribosomal protein L16 22676 23107 -1
CDS - ZP_07636383.1 RbacD_010100014188 ribosomal protein S3 23107 23970 -1
CDS rplV ZP_07636384.1 RbacD_010100014193 50S ribosomal protein L22 23986 24318 -1
CDS - ZP_07636385.1 RbacD_010100014198 30S ribosomal protein S19 24333 24605 -1
CDS rplB ZP_07636386.1 RbacD_010100014203 50S ribosomal protein L2 24620 25453 -1
CDS - ZP_07636387.1 RbacD_010100014208 50S ribosomal protein L23 25469 25762 -1
CDS rplD ZP_07636388.1 RbacD_010100014213 50S ribosomal protein L4 25762 26382 -1
CDS rplC ZP_07636389.1 RbacD_010100014218 50S ribosomal protein L3 26402 27127 -1
CDS rpsJ ZP_07636390.1 RbacD_010100014223 30S ribosomal protein S10 27267 27581 -1
CDS - ZP_07636391.1 RbacD_010100014228 hypothetical protein 28712 29818 -1
CDS - ZP_07636392.1 RbacD_010100014233 3H domain protein 29912 30427 -1
CDS - ZP_07636393.1 RbacD_010100014238 hypothetical protein 30600 31286 1
CDS - ZP_07636394.1 RbacD_010100014243 prolyl-tRNA synthetase 31403 32845 1
CDS - ZP_07636395.1 RbacD_010100014248 amino acid carrier protein 33170 34576 1
CDS - ZP_07636396.1 RbacD_010100014253 two component transcriptional regulator, winged helix family protein 34721 35389 1
CDS - ZP_07636397.1 RbacD_010100014258 histidine kinase 35386 37023 1
CDS - ZP_07636398.1 RbacD_010100014263 hypothetical protein 37040 38401 -1
CDS - ZP_07636399.1 RbacD_010100014268 permease domain-containing protein 38545 40401 -1
CDS - ZP_07636400.1 RbacD_010100014273 ABC transporter related protein 40391 41161 -1
CDS - ZP_07636401.1 RbacD_010100014278 hypothetical protein 41284 41568 -1
CDS - ZP_07636402.1 RbacD_010100014283 hypothetical protein 41710 41814 1
CDS - ZP_07636403.1 RbacD_010100014288 germination protease 41806 42696 -1
CDS rpsT ZP_07636404.1 RbacD_010100014293 30S ribosomal protein S20 42898 43161 1
CDS - ZP_07636405.1 RbacD_010100014298 putative ribonuclease BN 43288 44166 1
CDS - ZP_07636406.1 RbacD_010100014303 hypothetical protein 44296 49092 1
CDS - ZP_07636407.1 RbacD_010100014308 L-lactate dehydrogenase 49791 51029 1
CDS - ZP_07636408.1 RbacD_010100014313 NADPH-dependent FMN reductase 51067 52128 1
CDS - ZP_07636409.1 RbacD_010100014318 peptidase M23B 52174 52905 -1
CDS - ZP_07636410.1 RbacD_010100014323 peptidase M16 domain protein 53049 54308 1
CDS - ZP_07636411.1 RbacD_010100014328 hypothetical protein 54355 56076 -1
CDS - ZP_07636412.1 RbacD_010100014333 ATPase associated with various cellular activities AAA_5 56078 56998 -1
CDS - ZP_07636413.1 RbacD_010100014338 hypothetical protein 56985 57704 -1
CDS - ZP_07636414.1 RbacD_010100014343 hypothetical protein 57776 58831 -1
CDS - ZP_07636415.1 RbacD_010100014348 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR 59106 59783 1
CDS - ZP_07636416.1 RbacD_010100014353 putative sensory transduction histidine kinase 59780 61063 1
CDS - ZP_07636417.1 RbacD_010100014358 peptidase S1 and S6 chymotrypsin/Hap 61170 62219 1
CDS - ZP_07636418.1 RbacD_010100014363 putative oxidative stress regulatory protein 62357 62740 -1
CDS - ZP_07636419.1 RbacD_010100014368 carboxynorspermidine decarboxylase 62899 64110 -1
CDS - ZP_07636420.1 RbacD_010100014373 Saccharopine dehydrogenase 64110 65369 -1
CDS - ZP_07636421.1 RbacD_010100014378 agmatinase 65420 66274 -1
CDS - ZP_07636422.1 RbacD_010100014383 spermidine synthase 66274 67125 -1
CDS - ZP_07636423.1 RbacD_010100014388 Orn/Lys/Arg decarboxylase major region 67125 68594 -1
CDS - ZP_07636424.1 RbacD_010100014393 hypothetical protein 69112 69741 -1
CDS - ZP_07636425.1 RbacD_010100014398 hypothetical protein 70014 70463 1
CDS - ZP_07636426.1 RbacD_010100014403 multidrug resistance protein, MATE family 70456 71811 1
CDS - ZP_07636427.1 RbacD_010100014408 hypothetical protein 71927 73126 -1
CDS - ZP_07636428.1 RbacD_010100014413 hypothetical protein 73127 74272 -1
CDS - ZP_07636429.1 RbacD_010100014418 ABC transporter related protein 74269 75123 -1
CDS - ZP_07636430.1 RbacD_010100014423 hypothetical protein 75110 75847 -1
CDS - ZP_07636431.1 RbacD_010100014428 ECF subfamily RNA polymerase sigma factor 75849 76376 -1
CDS - ZP_07636432.1 RbacD_010100014433 two-component system, OmpR family, KDP operon response regulator KdpE 76525 77226 -1
CDS - ZP_07636433.1 RbacD_010100014438 hypothetical protein 77219 79858 -1
CDS - ZP_07636434.1 RbacD_010100014443 hypothetical protein 79899 80411 -1
CDS - ZP_07636435.1 RbacD_010100014448 trk system potassium uptake protein TrkA 80445 81095 -1
CDS - ZP_07636436.1 RbacD_010100014453 trk system potassium uptake protein TrkH 81114 82448 -1
CDS - ZP_07636437.1 RbacD_010100014458 hypothetical protein 82617 82811 -1
CDS - ZP_07636438.1 RbacD_010100014463 potassium-transporting ATPase subunit C 82977 83648 -1
CDS - ZP_07636439.1 RbacD_010100014468 potassium-transporting ATPase subunit B 83662 85710 -1
CDS - ZP_07636440.1 RbacD_010100014473 potassium-transporting ATPase subunit A 85727 87487 -1
CDS - ZP_07636441.1 RbacD_010100014478 hypothetical protein 87613 87711 -1
CDS - ZP_07636442.1 RbacD_010100014483 sensor protein KdpD 87865 89859 -1