| Type | Gene | Protein id | Locus | Product | Start pos | End pos | Strand |
|---|---|---|---|---|---|---|---|
| CDS | - | ZP_02574208.1 | SeI_A2109 | secretion chaparone | 1223 | 1615 | -1 |
| CDS | - | ZP_02574209.2 | SeI_A2110 | hypothetical protein | 1642 | 1866 | -1 |
| CDS | - | ZP_02574210.1 | SeI_A2111 | acyl carrier protein | 1946 | 2194 | -1 |
| CDS | - | ZP_02574211.2 | SeI_A2112 | cell invasion protein SipA | 2213 | 4225 | -1 |
| CDS | - | ZP_02574215.1 | SeI_A2115 | cell invasion protein SipB | 6648 | 8429 | -1 |
| CDS | - | ZP_02574216.1 | SeI_A2116 | type III secretion low calcium response chaperone LcrH/SycD | 8432 | 8929 | -1 |
| CDS | - | ZP_02574217.1 | SeI_A2117 | surface presentation of antigens protein SpaS | 9067 | 10137 | -1 |
| CDS | epaR | ZP_02574218.1 | SeI_A2118 | type III secretion apparatus protein SpaR/YscT/HrcT | 10124 | 10915 | -1 |
| CDS | - | ZP_02574219.1 | SeI_A2119 | EpaQ | 10919 | 11179 | -1 |
| CDS | epaP | ZP_02574220.1 | SeI_A2120 | type III secretion apparatus protein, YscR/HrcR family | 11205 | 11879 | -1 |
| CDS | epaO | ZP_02574221.1 | SeI_A2121 | type III secretion apparatus protein, YscQ/HrcQ family | 11869 | 12780 | -1 |
| CDS | - | ZP_02574222.1 | SeI_A2122 | antigen presentation protein SpaN | 12780 | 13790 | -1 |
| CDS | - | ZP_02574223.1 | SeI_A2123 | surface presentation of antigens protein SpaM | 13790 | 14233 | -1 |
| CDS | - | ZP_02574224.1 | SeI_A2124 | flagellum-specific ATP synthase | 14211 | 15506 | -1 |
| CDS | - | ZP_02574225.1 | SeI_A2125 | surface presentation of antigens protein SpaK | 15503 | 15910 | -1 |
| CDS | - | ZP_02574226.1 | SeI_A2126 | invasion protein InvA | 15934 | 17991 | -1 |
| CDS | - | ZP_02574227.1 | SeI_A2127 | invasion protein InvE | 18016 | 19134 | -1 |
| CDS | - | ZP_02574228.2 | SeI_A2128 | type III secretion outer membrane pore, YscC/HrcC family | 19131 | 20801 | -1 |
| CDS | - | ZP_02574229.1 | SeI_A2129 | invasion protein | 20816 | 21565 | -1 |
| CDS | - | ZP_03223875.1 | SeI_A2130 | hypothetical protein | 21664 | 21777 | -1 |
| CDS | - | ZP_02574230.1 | SeI_A2131 | cell adherance/invasion protein | 21923 | 22366 | 1 |
| CDS | - | ZP_02574237.2 | SeI_A2133 | putative ABC-type transporter | 24839 | 25156 | 1 |
| CDS | - | ZP_02574241.1 | SeI_A2136 | serine/threonine-protein phosphatase 2 | 26306 | 26962 | 1 |
| CDS | - | ZP_03223878.1 | SeI_A2137 | putative cytoplasmic protein | 27134 | 27319 | -1 |
| CDS | - | ZP_03223877.1 | SeI_A2138 | hypothetical protein | 27493 | 27606 | -1 |
| CDS | mutS | ZP_02574243.1 | SeI_A2139 | DNA mismatch repair protein MutS | 27814 | 30381 | 1 |
| CDS | - | ZP_02574244.1 | SeI_A2140 | putative cytoplasmic protein | 30437 | 30817 | -1 |
| CDS | - | ZP_02574245.1 | SeI_A2141 | major facilitator family transporter | 30814 | 32022 | -1 |
| CDS | - | ZP_02574246.1 | SeI_A2142 | transcriptional regulator, LysR family | 32131 | 33042 | 1 |
| CDS | - | ZP_02574247.1 | SeI_A2143 | GntP | 33084 | 34580 | -1 |
| CDS | - | ZP_02574248.1 | SeI_A2144 | NAD dependent epimerase/dehydratase family protein | 34577 | 35527 | -1 |
| CDS | - | ZP_02574249.1 | SeI_A2145 | hydroxypyruvate isomerase | 35567 | 36343 | -1 |
| CDS | - | ZP_02574250.1 | SeI_A2146 | aldolase class II protein YgbL | 36348 | 36986 | -1 |
| CDS | - | ZP_02574251.1 | SeI_A2147 | YgbK domain protein | 36983 | 38245 | -1 |
| CDS | - | ZP_02574252.1 | SeI_A2148 | 6-phosphogluconate dehydrogenase NAD-binding | 38239 | 39162 | -1 |
| CDS | - | ZP_02574253.1 | SeI_A2149 | transcriptional regulator, DeoR family | 39359 | 40123 | 1 |
| CDS | - | ZP_02574254.1 | SeI_A2150 | transcriptional regulator HosA | 40142 | 40546 | -1 |
| CDS | kpdB | ZP_02574255.1 | SeI_A2151 | 4-hydroxybenzoate decarboxylase, subunit B | 40717 | 41310 | 1 |
| CDS | kpdC | ZP_02574256.1 | SeI_A2152 | 4-hydroxybenzoate decarboxylase, subunit C | 41310 | 42737 | 1 |
| CDS | kpdD | ZP_02574257.1 | SeI_A2153 | 4-hydroxybenzoate decarboxylase, subunit D | 42748 | 42984 | 1 |
| CDS | rpoS | ZP_02574258.1 | SeI_A2154 | RNA polymerase sigma factor RpoS | 43029 | 44021 | -1 |
| CDS | - | ZP_02574259.1 | SeI_A2155 | lipoprotein NlpD | 44084 | 45205 | -1 |
| CDS | pcm | ZP_02574261.1 | SeI_A2157 | protein-L-isoaspartate O-methyltransferase | 45381 | 46007 | -1 |
| CDS | surE | ZP_02574262.2 | SeI_A2158 | 5'/3'-nucleotidase SurE | 46001 | 46768 | -1 |
| CDS | truD | ZP_02574263.1 | SeI_A2159 | tRNA pseudouridine synthase D | 46743 | 47792 | -1 |
| CDS | ispF | ZP_02574264.1 | SeI_A2160 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 47789 | 48268 | -1 |
| CDS | ispD | ZP_02574265.1 | SeI_A2161 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | 48268 | 48978 | -1 |
| CDS | ftsB | ZP_02574266.1 | SeI_A2162 | cell division protein FtsB | 48997 | 49308 | -1 |
| CDS | - | ZP_02574268.2 | SeI_A2163 | YgbE | 49499 | 49777 | -1 |
| CDS | cysC | ZP_02574269.1 | SeI_A2164 | adenylylsulfate kinase | 49873 | 50478 | -1 |
| CDS | - | ZP_02574270.1 | SeI_A2165 | sulfate adenylyltransferase subunit 1 | 50465 | 51904 | -1 |
| CDS | cysD | ZP_02574271.1 | SeI_A2166 | sulfate adenylyltransferase, subunit 2 | 51914 | 52822 | -1 |
| CDS | - | ZP_02574272.1 | SeI_A2167 | alkaline phosphatase isozyme conversion protein | 53073 | 54119 | 1 |
| CDS | - | ZP_03223874.1 | SeI_A2168 | hypothetical protein | 54884 | 55015 | 1 |
| CDS | - | ZP_03223881.1 | SeI_A2170 | conserved hypothetical protein | 55498 | 55614 | 1 |
| CDS | cas2 | ZP_02574273.1 | SeI_A2171 | crispr-associated protein Cas2 | 55706 | 55999 | -1 |
| CDS | cas1 | ZP_02574274.1 | SeI_A2172 | crispr-associated protein Cas1 | 55999 | 56919 | -1 |
| CDS | cse3 | ZP_02574275.1 | SeI_A2173 | crispr-associated protein, Cse3 family | 56916 | 57566 | -1 |
| CDS | cas5 | ZP_02574276.1 | SeI_A2174 | CRISPR-associated protein Cas5 | 57548 | 58294 | -1 |
| CDS | cse4 | ZP_02574277.1 | SeI_A2175 | crispr-associated protein, Cse4 family | 58305 | 59363 | -1 |
| CDS | cse2 | ZP_02574278.1 | SeI_A2176 | crispr-associated protein, Cse2 family | 59377 | 59937 | -1 |
| CDS | cse1 | ZP_02574279.1 | SeI_A2177 | crispr-associated protein, Cse1 family | 59934 | 61490 | -1 |
| CDS | - | ZP_03223879.1 | SeI_A2178 | crispr-associated helicase Cas3 | 61502 | 64165 | -1 |
| CDS | - | ZP_03223876.1 | SeI_A2179 | hypothetical protein | 64264 | 64398 | -1 |
| CDS | - | ZP_03223880.1 | SeI_A2180 | Sop effector protein SopD | 64481 | 65563 | 1 |
| CDS | cysH | ZP_02574284.1 | SeI_A2181 | phosphoadenosine phosphosulfate reductase | 65651 | 66385 | -1 |
| CDS | cysI | ZP_02574285.1 | SeI_A2182 | sulfite reductase (NADPH) hemoprotein, beta-component | 66461 | 68173 | -1 |
| CDS | - | ZP_02574286.1 | SeI_A2183 | sulfite reductase [NADPH] flavoprotein, alpha-component | 68173 | 69972 | -1 |
| CDS | - | ZP_02574288.1 | SeI_A2184 | putative 6-pyruvoyl tetrahydrobiopterin synthase | 70396 | 70758 | 1 |
| CDS | - | ZP_02574289.1 | SeI_A2186 | beta-lactamase domain protein | 70846 | 71643 | -1 |
| CDS | - | ZP_02574291.1 | SeI_A2188 | hypothetical protein | 73476 | 73622 | -1 |
| CDS | - | ZP_02574292.1 | SeI_A2189 | radical SAM domain protein | 73653 | 74324 | -1 |