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Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS csrA ZP_03219417.1 SeJ_A3269 carbon storage regulator 124 309 -1
CDS alaS ZP_03219330.1 SeJ_A3270 alanyl-tRNA synthetase 544 3174 -1
CDS recX ZP_03219403.1 SeJ_A3271 regulatory protein RecX 3410 3910 -1
CDS recA ZP_03219270.1 SeJ_A3272 protein RecA 4027 5088 -1
CDS - ZP_03219397.1 SeJ_A3273 competence/damage-inducible protein CinA domain protein 5173 5670 -1
CDS mltB ZP_03219182.1 SeJ_A3274 lytic murein transglycosylase B 6149 7228 -1
CDS - ZP_03219221.1 SeJ_A3275 glucitol/sorbitol permease iic component 7481 8044 1
CDS - ZP_03219259.1 SeJ_A3276 glucitol/sorbitol-specific phosphotransferase enzyme iib component 8041 9012 1
CDS - ZP_03219344.1 SeJ_A3277 glucitol/sorbitol-specific phosphotransferase enzyme iia component 9024 9386 1
CDS srlD ZP_03219465.1 SeJ_A3278 sorbitol-6-phosphate 2-dehydrogenase 9398 10177 1
CDS - ZP_03219475.1 SeJ_A3279 glucitol operon activator protein 10254 10613 1
CDS srlR ZP_03219174.1 SeJ_A3280 glucitol operon repressor 10811 11584 1
CDS gutQ ZP_03219469.1 SeJ_A3281 gutQ protein 11577 12542 1
CDS norR ZP_03219584.1 SeJ_A3282 anaerobic nitric oxide reductase transcription regulator NorR 12539 14059 -1
CDS - ZP_03219313.1 SeJ_A3283 anaerobic nitric oxide reductase flavorubredoxin 14245 15684 1
CDS - ZP_03219453.1 SeJ_A3284 nitric oxide reductase FlRd-NAD 15681 16814 1
CDS hypF ZP_03219483.1 SeJ_A3285 [NiFe] hydrogenase maturation protein HypF 16911 19151 -1
CDS - ZP_03219362.1 SeJ_A3286 protein AegA 19297 19842 -1
CDS - ZP_03219451.1 SeJ_A3287 conserved hypothetical protein 19811 19945 -1
CDS - ZP_03219320.1 SeJ_A3288 conserved hypothetical protein 20043 20852 -1
CDS hycI ZP_03219381.1 SeJ_A3289 hydrogenase maturation peptidase HycI 20879 21349 -1
CDS - ZP_03219266.1 SeJ_A3290 formate hydrogenlyase maturation protein 21342 21752 -1
CDS hycG ZP_03219619.1 SeJ_A3291 formate hydrogenlyase, subunit G 21749 22516 -1
CDS hycF ZP_03219418.1 SeJ_A3292 formate hydrogenlyase, subunit F 22516 23058 -1
CDS hycE ZP_03219376.1 SeJ_A3293 formate hydrogenlyase, subunit E 23068 24777 -1
CDS hycD ZP_03219328.1 SeJ_A3294 formate hydrogenlyase, subunit D 24795 25718 -1
CDS hycC ZP_03219516.1 SeJ_A3295 formate hydrogenlyase, subunit C 25721 27547 -1
CDS hycB ZP_03219392.1 SeJ_A3296 formate hydrogenlyase, subunit B 27547 28155 -1
CDS - ZP_03219254.1 SeJ_A3297 hypothetical protein 28177 28290 -1
CDS - ZP_03219452.1 SeJ_A3298 formate hydrogenlyase regulatory protein 28301 28762 -1
CDS hypA ZP_03219357.1 SeJ_A3299 hydrogenase nickel insertion protein HypA 28972 29328 1
CDS hypB ZP_03219243.1 SeJ_A3300 hydrogenase isoenzymes nickel incorporation protein HypB 29397 30269 1
CDS hypC2 ZP_03219590.1 SeJ_A3301 hydrogenase assembly chaperone HypC/HupF 30260 30532 1
CDS hypD ZP_03219405.1 SeJ_A3302 hydrogenase expression/formation protein HypD 30532 31653 1
CDS hypE ZP_03219380.1 SeJ_A3303 hydrogenase expression/formation protein HypE 31650 32660 1
CDS - ZP_03219529.1 SeJ_A3304 formate hydrogenlyase transcriptional activator 32894 34957 1
CDS - ZP_03219180.1 SeJ_A3305 conserved hypothetical protein 35019 35363 -1
CDS - ZP_03219308.1 SeJ_A3306 periplasmic chelated iron-binding protein YfeA 35545 36462 1
CDS - ZP_03219497.1 SeJ_A3307 chelated iron transport system membrane protein YfeB 36459 37280 1
CDS - ZP_03219627.1 SeJ_A3308 chelated iron transport system membrane protein YfeC 37277 38137 1
CDS - ZP_03219522.1 SeJ_A3309 chelated iron transport system membrane protein YfeD 38128 38976 1
CDS - ZP_03219329.1 SeJ_A3312 transcriptional regulator 40143 40898 -1
CDS - ZP_03219209.1 SeJ_A3313 transcriptional regulator, AraC family 41283 42170 -1
CDS - ZP_03219491.1 SeJ_A3314 conserved hypothetical protein 42515 42877 -1
CDS - ZP_03219366.1 SeJ_A3315 oxygen-regulated invasion protein OrgB 42964 43644 -1
CDS - ZP_03219239.1 SeJ_A3316 type III secretion apparatus protein OrgA/MxiK 43601 44179 -1
CDS - ZP_03219564.1 SeJ_A3317 type III secretion apparatus lipoprotein, YscJ/HrcJ family 44172 44930 -1
CDS - ZP_03219440.1 SeJ_A3318 protein PrgJ 44927 45169 -1
CDS eprI ZP_03219332.1 SeJ_A3319 type III secretion apparatus needle protein 45251 45493 -1
CDS eprH ZP_03219456.1 SeJ_A3320 type III secretion apparatus protein PrgH/EprH 45518 46582 -1
CDS - ZP_03219267.1 SeJ_A3321 transcriptional regulator HilD 47012 47941 1
CDS - ZP_03219625.1 SeJ_A3322 transcriptional regulator HilA 49030 50691 1
CDS - ZP_03219622.1 SeJ_A3323 invasion protein IagB 50709 51191 1
CDS - ZP_03219480.1 SeJ_A3324 effector protein SptP 51245 52852 -1
CDS - ZP_03219574.1 SeJ_A3325 secretion chaparone 52863 53255 -1
CDS - ZP_03219441.1 SeJ_A3326 hypothetical protein 53282 53506 -1
CDS - ZP_03219375.1 SeJ_A3327 acyl carrier protein 53586 53834 -1
CDS - ZP_03219228.1 SeJ_A3328 cell invasion protein SipA 53853 55877 -1
CDS - ZP_03219623.1 SeJ_A3329 type III effector protein IpaD/SipD/SspD 55929 56951 -1
CDS - ZP_03219387.1 SeJ_A3331 cell invasion protein SipB 58279 60060 -1
CDS - ZP_03219477.1 SeJ_A3332 type III secretion low calcium response chaperone LcrH/SycD 60063 60560 -1
CDS - ZP_03219432.1 SeJ_A3333 surface presentation of antigens protein SpaS 60698 61768 -1
CDS epaR ZP_03219269.1 SeJ_A3334 type III secretion apparatus protein SpaR/YscT/HrcT 61755 62546 -1
CDS - ZP_03219301.1 SeJ_A3335 EpaQ 62550 62810 -1
CDS epaP ZP_03219265.1 SeJ_A3336 type III secretion apparatus protein, YscR/HrcR family 62836 63510 -1
CDS epaO ZP_03219563.1 SeJ_A3337 type III secretion apparatus protein, YscQ/HrcQ family 63500 64411 -1
CDS - ZP_03219433.1 SeJ_A3338 antigen presentation protein SpaN 64411 65421 -1
CDS - ZP_03219304.1 SeJ_A3339 virulence-associated secretory protein 65421 65864 -1
CDS - ZP_03219419.1 SeJ_A3340 flagellum-specific ATP synthase 65842 67137 -1
CDS - ZP_03219562.1 SeJ_A3341 surface presentation of antigens protein SpaK 67134 67541 -1
CDS - ZP_03219199.1 SeJ_A3342 invasion protein InvA 67565 69622 -1
CDS - ZP_03219582.1 SeJ_A3343 invasion protein InvE 69647 70765 -1
CDS - ZP_03219422.1 SeJ_A3344 type III secretion outer membrane pore, YscC/HrcC family 70762 72306 -1
CDS - ZP_03219416.1 SeJ_A3345 invasion protein 72447 73196 -1
CDS - ZP_03219286.1 SeJ_A3346 hypothetical protein 73295 73408 -1
CDS - ZP_03219570.1 SeJ_A3347 cell adherance/invasion protein 73554 73997 1
CDS - ZP_03219261.1 SeJ_A3349 serine/threonine-protein phosphatase 2 76079 76735 1
CDS mutS ZP_03219296.1 SeJ_A3351 DNA mismatch repair protein MutS 77712 80279 1
CDS - ZP_03219413.1 SeJ_A3352 putative cytoplasmic protein 80335 80715 -1
CDS - ZP_03219446.1 SeJ_A3353 major facilitator family transporter 80712 81920 -1
CDS - ZP_03219305.1 SeJ_A3354 transcriptional regulator, LysR family 82029 82940 1
CDS - ZP_03219345.1 SeJ_A3355 GntP 82982 84478 -1
CDS - ZP_03219231.1 SeJ_A3356 NAD dependent epimerase/dehydratase family protein 84475 85425 -1
CDS - ZP_03219612.1 SeJ_A3357 hydroxypyruvate isomerase 85465 86241 -1
CDS - ZP_03219264.1 SeJ_A3358 aldolase class II protein YgbL 86246 86884 -1
CDS - ZP_03219597.1 SeJ_A3359 YgbK domain protein 86881 88143 -1
CDS - ZP_03219515.1 SeJ_A3360 6-phosphogluconate dehydrogenase NAD-binding 88137 89060 -1
CDS - ZP_03219191.1 SeJ_A3361 transcriptional regulator, DeoR family 89257 90021 1
CDS - ZP_03219545.1 SeJ_A3362 transcriptional regulator HosA 90040 90444 -1
CDS kpdB ZP_03219338.1 SeJ_A3363 4-hydroxybenzoate decarboxylase, subunit B 90615 91208 1
CDS kpdC ZP_03219234.1 SeJ_A3364 4-hydroxybenzoate decarboxylase, subunit C 91208 92635 1
CDS kpdD ZP_03219214.1 SeJ_A3365 4-hydroxybenzoate decarboxylase, subunit D 92646 92882 1
CDS rpoS ZP_03219302.1 SeJ_A3366 RNA polymerase sigma factor RpoS 92927 93919 -1
CDS - ZP_03219507.1 SeJ_A3367 lipoprotein 93982 95115 -1
CDS pcm ZP_03219218.1 SeJ_A3369 protein-L-isoaspartate O-methyltransferase 95291 95917 -1
CDS surE ZP_03219253.1 SeJ_A3370 5'/3'-nucleotidase SurE 95911 96678 -1
CDS truD ZP_03219371.1 SeJ_A3371 tRNA pseudouridine synthase D 96653 97702 -1
CDS ispF ZP_03219560.1 SeJ_A3372 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 97699 98178 -1
CDS ispD ZP_03219530.1 SeJ_A3373 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 98178 98888 -1
CDS ftsB ZP_03219438.1 SeJ_A3374 cell division protein FtsB 98907 99218 -1