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Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA rrs - SeJ_A4355 16S ribosomal RNA 8 1541 -1
CDS - ZP_03219862.1 SeJ_A4354 transcriptional regulator, GntR family 2029 2733 1
CDS - ZP_03219634.1 SeJ_A4353 inner membrane transport protein YieO 2745 4172 1
CDS - ZP_03219814.1 SeJ_A4352 ribose operon repressor 4138 5136 -1
CDS rbsK ZP_03219955.1 SeJ_A4351 ribokinase 5140 6069 -1
CDS rbsB ZP_03219859.1 SeJ_A4350 ribose ABC transporter, periplasmic ribose-binding protein 6202 7092 -1
CDS rbsC ZP_03219942.1 SeJ_A4349 ribose ABC transporter, permease protein 7117 8082 -1
CDS rbsA ZP_03219847.1 SeJ_A4348 ribose ABC transporter, ATP-binding protein 8088 9593 -1
CDS rbsD ZP_03219734.1 SeJ_A4347 cytoplasmic D-ribose-binding protein RbsD 9601 10020 -1
CDS - ZP_03220056.1 SeJ_A4345 ATPase RavA 12453 13949 1
CDS - ZP_03219935.1 SeJ_A4344 protein ViaA 13943 15394 1
CDS asnA ZP_03219818.1 SeJ_A4343 aspartate--ammonia ligase 15399 16391 -1
CDS asnC ZP_03219687.1 SeJ_A4342 regulatory protein AsnC 16542 17000 1
CDS mioC ZP_03219937.1 SeJ_A4341 MioC protein 17090 17533 1
CDS gidA ZP_03219846.1 SeJ_A4340 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 17912 19801 1
CDS gidB ZP_03219841.1 SeJ_A4339 16S rRNA methyltransferase GidB 19904 20527 1
CDS - ZP_03219646.1 SeJ_A4338 hypothetical protein 20640 20777 1
CDS - ZP_03219978.1 SeJ_A4337 conserved hypothetical protein 20885 21028 1
CDS atpI ZP_03219885.1 SeJ_A4336 ATP synthase F0, I subunit 21398 21523 1
CDS atpB ZP_03220034.1 SeJ_A4335 ATP synthase F0, A subunit 21532 22347 1
CDS atpE ZP_03219776.1 SeJ_A4334 ATP synthase F0, C subunit 22394 22633 1
CDS atpF ZP_03219927.1 SeJ_A4333 ATP synthase F0, B subunit 22693 23163 1
CDS atpH ZP_03219889.1 SeJ_A4332 ATP synthase F1, delta subunit 23178 23711 1
CDS atpA ZP_03220027.1 SeJ_A4331 ATP synthase F1, alpha subunit 23724 25265 1
CDS atpG ZP_03220005.1 SeJ_A4330 ATP synthase F1, gamma subunit 25316 26179 1
CDS atpD ZP_03219644.1 SeJ_A4329 ATP synthase F1, beta subunit 26206 27588 1
CDS atpC ZP_03219743.1 SeJ_A4328 ATP synthase F1, epsilon subunit 27615 28028 1
CDS - ZP_03219967.1 SeJ_A4327 putative membrane protein 28258 28956 1
CDS glmU ZP_03219977.1 SeJ_A4326 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 29276 30646 1
CDS glmS ZP_03219656.1 SeJ_A4325 glutamine-fructose-6-phosphate transaminase 30835 32664 1
CDS - ZP_03219783.1 SeJ_A4324 HTH-type transcriptional regulator SgrR 32815 34605 -1
CDS - ZP_03219896.1 SeJ_A4323 shikimate 5-dehydrogenase 34667 35485 1
CDS pstS ZP_03219726.1 SeJ_A4321 phosphate ABC transporter, periplasmic phosphate-binding protein PstS 37074 38114 1
CDS pstC ZP_03219684.1 SeJ_A4320 phosphate ABC transporter, permease protein PstC 38250 39209 1
CDS pstA ZP_03219782.1 SeJ_A4319 phosphate ABC transporter, permease protein PstA 39209 40099 1
CDS pstB ZP_03220040.1 SeJ_A4318 phosphate ABC transporter, ATP-binding protein 40210 40983 1
CDS phoU ZP_03219653.1 SeJ_A4317 phosphate transport system regulatory protein PhoU 40998 41723 1
CDS - ZP_03219817.1 SeJ_A4316 HAD hydrolase, IA family 41818 42483 -1
CDS - ZP_03219906.1 SeJ_A4315 inorganic anion transporter, sulfate permease (SulP) family 42652 43989 1
CDS - ZP_03220049.1 SeJ_A4314 YieF 44034 44618 -1
CDS - ZP_03219750.1 SeJ_A4313 o252 44618 45373 -1
CDS - ZP_03219869.1 SeJ_A4312 HTH-type transcriptional regulator YidZ 45531 46490 -1
CDS - ZP_03220038.1 SeJ_A4311 multidrug resistance protein MdtL 46459 47646 -1
CDS trmE ZP_03219661.1 SeJ_A4310 tRNA modification GTPase TrmE 47829 49193 -1
CDS - ZP_03219755.1 SeJ_A4309 inner membrane protein OxaA 49335 50981 -1
CDS rnpA ZP_03219800.1 SeJ_A4308 ribonuclease P protein component 51205 51564 -1
CDS rpmH ZP_03219901.1 SeJ_A4307 ribosomal protein L34 51581 51721 -1
CDS dnaA ZP_03219988.1 SeJ_A4306 chromosomal replication initiator protein DnaA 52382 53782 1
CDS dnaN ZP_03219785.1 SeJ_A4305 DNA polymerase III, beta subunit 53787 54887 1
CDS - ZP_03219858.1 SeJ_A4304 DNA replication and repair protein RecF 55035 56108 1
CDS gyrB ZP_03219956.1 SeJ_A4303 DNA gyrase, B subunit 56137 58551 1
CDS - ZP_03219943.1 SeJ_A4301 mandelate racemase/muconate lactonizing enzyme family protein 59581 60771 -1
CDS - ZP_03219914.1 SeJ_A4300 putative permease 60788 62050 -1
CDS - ZP_03219672.1 SeJ_A4299 phosphatase YidA 62356 63168 1
CDS - ZP_03219719.1 SeJ_A4298 hypothetical protein 63255 63368 -1
CDS - ZP_03219883.1 SeJ_A4297 conserved hypothetical protein 63370 64392 1
CDS - ZP_03219969.1 SeJ_A4296 outer membrane protein 64389 65528 1
CDS - ZP_03219689.1 SeJ_A4295 conserved hypothetical protein 65525 66652 1
CDS torS ZP_03219640.1 SeJ_A4293 tmao reductase system sensor tors 66757 69444 -1
CDS - ZP_03219767.1 SeJ_A4294 hypothetical protein 69431 69547 1
CDS torT ZP_03219786.1 SeJ_A4292 tmao reductase system periplasmic protein tort 69572 70612 1
CDS - ZP_03219702.1 SeJ_A4291 TorCAD operon transcriptional regulatory protein TorR 70585 71313 -1
CDS torC ZP_03219898.1 SeJ_A4290 trimethylamine-N-oxide reductase c-type cytochrome TorC 71407 72591 1
CDS torA ZP_03219972.1 SeJ_A4289 trimethylamine-N-oxide reductase TorA 72581 75133 1
CDS - ZP_03219724.1 SeJ_A4288 chaperone protein TorD 75126 75758 1
CDS - ZP_03219806.1 SeJ_A4287 cytochrome-c peroxidase 75948 77348 1
CDS ccmA ZP_03219705.1 SeJ_A4286 heme ABC exporter, ATP-binding protein CcmA 77345 77971 1
CDS ccmB ZP_03219878.1 SeJ_A4285 heme exporter protein CcmB 77971 78627 1
CDS - ZP_03219968.1 SeJ_A4284 heme exporter protein C2 78670 79416 1
CDS ccmD ZP_03219958.1 SeJ_A4283 heme exporter protein CcmD 79452 79625 1
CDS - ZP_03219820.1 SeJ_A4282 ABC family protein 79622 80101 1
CDS ccmF ZP_03219902.1 SeJ_A4281 cytochrome c-type biogenesis protein CcmF 80098 82029 1
CDS - ZP_03220028.1 SeJ_A4280 thiol:disulfide interChange protein DsbE 82026 82583 1
CDS - ZP_03219903.1 SeJ_A4279 cytochrome c-type biogenesis protein H1 82580 83623 1
CDS - ZP_03219638.1 SeJ_A4276 conserved outer membrane protein 84973 85263 -1
CDS - ZP_03219715.1 SeJ_A4277 conserved hypothetical protein 85232 85351 1
CDS ibpA ZP_03219900.1 SeJ_A4275 small heat shock protein IbpA 85609 86028 1
CDS ibpB ZP_03219996.1 SeJ_A4274 small heat shock protein IbpB 86138 86566 1
CDS - ZP_03219641.1 SeJ_A4273 putative potassium uptake protein TrkA 86755 88416 1
CDS - ZP_03219951.1 SeJ_A4272 hypothetical protein 88569 88706 -1
CDS - ZP_03219636.1 SeJ_A4271 hypothetical protein 88706 88840 1
CDS - ZP_03219809.1 SeJ_A4270 inner membrane protein YidH 88860 89207 1
CDS - ZP_03219690.1 SeJ_A4269 inner membrane protein YidG 89197 89559 1
CDS - ZP_03219735.1 SeJ_A4268 f165 89556 90086 1
CDS dsdA ZP_03220014.1 SeJ_A4267 D-serine ammonia-lyase 90168 91490 -1
CDS - ZP_03219831.1 SeJ_A4266 DsdX permease 91508 92845 -1
CDS dsdC ZP_03219708.1 SeJ_A4265 D-serine deaminase transcriptional activator 93056 93994 1
CDS emrD ZP_03219982.1 SeJ_A4264 multidrug resistance protein D 95070 96254 -1
CDS - ZP_03219944.1 SeJ_A4263 integral membrane protein 96457 97290 -1
CDS ilvB ZP_03219934.1 SeJ_A4262 acetolactate synthase, large subunit, biosynthetic type 98338 100026 1
CDS ilvN ZP_03219642.1 SeJ_A4261 acetolactate synthase, isozyme I, small subunit 100030 100320 1
CDS - ZP_03219829.1 SeJ_A4260 deoxyribose operon repressor 100322 101107 -1
CDS rbsK ZP_03219913.1 SeJ_A4259 ribokinase 101432 102352 1
CDS fucP ZP_03220006.1 SeJ_A4258 L-fucose:H+ symporter permease 102383 103699 1
CDS - ZP_03219793.1 SeJ_A4257 DeoX 103711 104724 1
CDS uhpA ZP_03219761.1 SeJ_A4256 transcriptional regulatory protein UhpA 104799 105389 1
CDS uhpB ZP_03219680.1 SeJ_A4255 sensor histidine kinase UhpB 105389 106891 1
CDS uhpC ZP_03220018.1 SeJ_A4254 regulatory protein UhpC 106901 108229 1
CDS uhpT ZP_03219946.1 SeJ_A4253 hexose phosphate transport protein 108372 109763 1
CDS - ZP_03220026.1 SeJ_A4252 conserved hypothetical protein 109956 110408 1