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Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - SeJ_A2446 tRNA-Asn 1624 1701 1
CDS - ZP_03220326.1 SeJ_A2447 integrase 1866 2168 1
CDS arsB ZP_03220312.1 SeJ_A2448 arsenical-resistance protein 2187 3236 -1
CDS - ZP_03220239.1 SeJ_A2449 arsenical pump-driving ATPase 3254 5014 -1
CDS - ZP_03220083.1 SeJ_A2450 arsenical resistance operon trans-acting repressor ArsD 5058 5420 -1
CDS - ZP_03220394.1 SeJ_A2451 arsenate reductase 5454 5930 -1
CDS - ZP_03220179.1 SeJ_A2452 arsenic resistance transcriptional regulator 5927 6301 -1
CDS - ZP_03220398.1 SeJ_A2456 hypothetical protein 8089 8220 -1
CDS - ZP_03220084.1 SeJ_A2457 transcriptional regulator, LysR family 8671 9549 1
CDS gap ZP_03220138.1 SeJ_A2458 glyceraldehyde-3-phosphate dehydrogenase, type I 9699 10694 -1
CDS - ZP_03220304.1 SeJ_A2459 transporter, EamA family 10782 11744 -1
CDS - ZP_03220445.1 SeJ_A2460 putative AMP-binding enzyme 11867 13363 -1
CDS - ZP_03220065.1 SeJ_A2462 putative arginase 13398 14546 -1
CDS - ZP_03220393.1 SeJ_A2463 hypothetical protein 15206 15373 -1
CDS - ZP_03220401.1 SeJ_A2464 protein ErfK/srfK 15936 16865 -1
CDS cobT ZP_03220078.1 SeJ_A2465 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16943 18013 -1
CDS cobS ZP_03220358.1 SeJ_A2466 cobalamin 5'-phosphate synthase 18040 18783 -1
CDS - ZP_03220288.1 SeJ_A2467 bifunctional adenosylcobalamin biosynthesis protein CobU 18780 19325 -1
CDS cobQ ZP_03220350.1 SeJ_A2468 cobyric acid synthase CobQ 19322 20842 -1
CDS - ZP_03220074.1 SeJ_A2469 cobalt import ATP-binding protein CbiO 20839 21654 -1
CDS cbiQ ZP_03220341.1 SeJ_A2470 cobalt ABC transporter, permease protein CbiQ 21663 22340 -1
CDS - ZP_03220453.1 SeJ_A2471 cobalt transport protein CbiN 22327 22608 -1
CDS cbiM ZP_03220337.1 SeJ_A2472 cobalamin biosynthesis protein CbiM 22610 23347 -1
CDS cobI ZP_03220433.1 SeJ_A2473 precorrin-2 C20-methyltransferase 23344 24057 -1
CDS - ZP_03220106.1 SeJ_A2474 sirohydrochlorin cobaltochelatase 24054 24848 -1
CDS cobK ZP_03220091.1 SeJ_A2475 precorrin-6x reductase 24851 25642 -1
CDS cobJ ZP_03220414.1 SeJ_A2476 precorrin-3B C17-methyltransferase 25639 26364 -1
CDS - ZP_03220111.1 SeJ_A2477 CbiG 26364 27419 -1
CDS cobM ZP_03220167.1 SeJ_A2478 precorrin-4 C11-methyltransferase 27400 28173 -1
CDS - ZP_03220297.1 SeJ_A2479 precorrin-8W decarboxylase 28157 28735 -1
CDS cbiE ZP_03220411.1 SeJ_A2480 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 28725 29330 -1
CDS cbiD ZP_03220240.1 SeJ_A2481 cobalamin biosynthesis protein CbiD 29324 30463 -1
CDS - ZP_03220122.1 SeJ_A2482 cobalt-precorrin-8X methylmutase 30463 31095 -1
CDS cobD ZP_03220232.1 SeJ_A2483 cobalamin biosynthesis protein CobD 31106 32065 -1
CDS cobB ZP_03220261.1 SeJ_A2484 cobyrinic Acid a,c-diamide synthase 32062 33441 -1
CDS - ZP_03220257.1 SeJ_A2486 regulatory protein PocR 34039 34950 -1
CDS - ZP_03220162.1 SeJ_A2487 propanediol diffusion facilitator 35167 35961 -1
CDS pduA ZP_03220064.1 SeJ_A2488 propanediol utilization protein PduA 36486 36770 1
CDS - ZP_03220128.1 SeJ_A2489 propanediol utilization protein PduB 36767 37579 1
CDS pduC ZP_03220216.1 SeJ_A2490 propanediol utilization dehydratase, large subunit 37598 39262 1
CDS - ZP_03220336.1 SeJ_A2491 propanediol dehydratase medium subunit 39273 39947 1
CDS - ZP_03220082.1 SeJ_A2492 propanediol dehydratase small subunit 39962 40483 1
CDS - ZP_03220079.1 SeJ_A2493 glycerol dehydratase reactivation factor large subunit 40499 42331 1
CDS - ZP_03220259.1 SeJ_A2494 PduH protein 42321 42671 1
CDS - ZP_03220376.1 SeJ_A2495 propanediol utilization protein PduJ 42691 42966 1
CDS - ZP_03220072.1 SeJ_A2496 propanediol utilization protein 43004 43465 1
CDS - ZP_03220375.1 SeJ_A2497 propanediol utilization protein 43465 44097 1
CDS - ZP_03220322.1 SeJ_A2498 propanediol utilization 44094 44585 1
CDS - ZP_03220231.1 SeJ_A2499 propanediol utilization protein 44589 44864 1
CDS - ZP_03220459.1 SeJ_A2500 PduO 44874 45884 1
CDS - ZP_03220311.1 SeJ_A2501 ethanolamine utilization protein EutE 45881 47275 1
CDS - ZP_03220448.1 SeJ_A2502 propanediol utilization: propanol dehydrogenase 47287 48399 1
CDS - ZP_03220115.1 SeJ_A2503 polyhedral body protein 48396 49751 1
CDS - ZP_03220109.1 SeJ_A2504 polyhedral body protein 49754 50308 1
CDS - ZP_03220168.1 SeJ_A2505 propanediol utilization protein PduU 50335 50658 1
CDS eutP ZP_03220431.1 SeJ_A2506 ethanolamine utilization protein, EutP 50663 51115 1
CDS ackA ZP_03220100.1 SeJ_A2507 acetate kinase 51100 52314 1
CDS - ZP_03220182.1 SeJ_A2508 propanediol utilization 52372 53274 1
CDS - ZP_03220333.1 SeJ_A2509 protein YeeX 53308 53643 -1
CDS - ZP_03220407.1 SeJ_A2510 inner membrane protein YeeA 53888 54946 -1
CDS - ZP_03220461.1 SeJ_A2511 DNA gyrase inhibitory protein 55065 55532 -1
CDS - ZP_03220331.1 SeJ_A2512 D-alanyl-D-alanine carboxypeptidase DacD 55683 56855 -1
CDS - ZP_03220199.1 SeJ_A2513 thiosulfate reductase cytochrome B subunit 56979 57743 -1
CDS - ZP_03220255.1 SeJ_A2514 4Fe-4S binding domain protein 57740 58318 -1
CDS phsA ZP_03220316.1 SeJ_A2515 thiosulfate reductase 58333 60609 -1
CDS - ZP_03220434.1 SeJ_A2516 conserved hypothetical protein 60854 61000 -1
CDS - ZP_03220121.1 SeJ_A2517 hypothetical protein 62030 63577 1
CDS - ZP_03220150.1 SeJ_A2518 hypothetical protein 63781 63903 -1
CDS - ZP_03220274.1 SeJ_A2519 exodeoxyribonuclease I 63920 65350 1
CDS yeeF ZP_03220344.1 SeJ_A2521 amino acid permease 65486 66844 -1
CDS - ZP_03220465.1 SeJ_A2520 hypothetical protein 66819 66935 1
CDS - ZP_03220201.1 SeJ_A2522 LysR substrate binding domain protein 67130 68044 -1
CDS - ZP_03220210.1 SeJ_A2523 protein YeeZ 68090 68914 -1
CDS hisG ZP_03220430.1 SeJ_A2525 ATP phosphoribosyltransferase 69273 70172 1
CDS hisD ZP_03220374.1 SeJ_A2526 histidinol dehydrogenase 70275 71579 1
CDS hisC ZP_03220275.1 SeJ_A2527 histidinol-phosphate aminotransferase 71576 72655 1
CDS hisH ZP_03220112.1 SeJ_A2529 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 73719 74309 1
CDS hisA ZP_03220365.1 SeJ_A2530 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 74309 75046 1
CDS hisF ZP_03220404.1 SeJ_A2531 imidazoleglycerol phosphate synthase, cyclase subunit 75028 75804 1
CDS - ZP_03220291.1 SeJ_A2532 histidine biosynthesis bifunctional protein hisIE 75798 76409 1
CDS - ZP_03220217.1 SeJ_A2533 chain length determinant protein 76504 77481 -1
CDS ugd ZP_03220455.1 SeJ_A2534 UDP-glucose 6-dehydrogenase 77630 78796 -1
CDS gnd ZP_03220397.1 SeJ_A2535 6-phosphogluconate dehydrogenase, decarboxylating 79033 80439 -1
CDS - ZP_03220063.1 SeJ_A2536 undecaprenyl-phosphate galactose phosphotransferase 80603 82033 -1
CDS - ZP_03220263.1 SeJ_A2537 putative phosphomannomutase 82105 83538 -1
CDS - ZP_03220396.1 SeJ_A2538 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 83525 84964 -1
CDS - ZP_03220098.1 SeJ_A2539 putative O antigen biosynthesis rhamnosyltransferase 84965 85909 -1
CDS - ZP_03220224.1 SeJ_A2540 protein RfbU 85910 86971 -1
CDS - ZP_03220317.1 SeJ_A2541 O antigen biosynthesis abequosyltransferase RfbV 87546 88547 -1
CDS - ZP_03220429.1 SeJ_A2542 putative O-antigen transporter 88549 89832 -1
CDS - ZP_03220281.1 SeJ_A2543 CDP-paratose 2-epimerase 89918 90934 -1
CDS - ZP_03220391.1 SeJ_A2544 paratose synthase 90931 91770 -1
CDS - ZP_03220321.1 SeJ_A2545 lipopolysaccharide biosynthesis protein RfbH 91806 93119 -1
CDS rfbG ZP_03220327.1 SeJ_A2546 CDP-glucose 4,6-dehydratase 93146 94225 -1
CDS rfbF ZP_03220388.1 SeJ_A2547 glucose-1-phosphate cytidylyltransferase 94230 95003 -1
CDS - ZP_03220413.1 SeJ_A2548 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase 95019 95993 -1
CDS rfbA ZP_03220077.1 SeJ_A2549 glucose-1-phosphate thymidylyltransferase 96551 97435 -1
CDS rfbD ZP_03220190.1 SeJ_A2550 dTDP-4-dehydrorhamnose reductase 97477 98376 -1
CDS rfbB ZP_03220092.1 SeJ_A2551 dTDP-glucose 4,6-dehydratase 98376 99461 -1
CDS galF ZP_03220313.1 SeJ_A2552 regulatory protein GalF 99838 100731 -1