xBASE Logo
About | Contact | Home

Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - SeJ_A4356 tRNA-Glu 606 683 1
rRNA rrl - SeJ_A4357 23S ribosomal RNA 876 3781 1
rRNA rrf - SeJ_A4359 5S ribosomal RNA 3876 3991 1
tRNA - - SeJ_A4360 tRNA-Asp 4044 4122 1
tRNA - - SeJ_A4361 tRNA-Trp 4129 4206 1
CDS hdfR ZP_03221297.1 SeJ_A4362 transcriptional regulator HdfR 4307 5143 -1
CDS - ZP_03221144.1 SeJ_A4363 conserved hypothetical protein 5262 5600 1
CDS - ZP_03221211.1 SeJ_A4364 Mg chelatase homolog 5625 7145 -1
CDS ilvG ZP_03221174.1 SeJ_A4365 acetolactate synthase, large subunit, isozyme II 7735 9381 1
CDS ilvM ZP_03221283.1 SeJ_A4366 acetolactate synthase, isozyme II, small subunit 9378 9641 1
CDS ilvE ZP_03221287.1 SeJ_A4367 branched-chain amino acid aminotransferase 9659 10588 1
CDS ilvD ZP_03221323.1 SeJ_A4368 dihydroxy-acid dehydratase 10749 12599 1
CDS ilvA ZP_03221244.1 SeJ_A4369 threonine ammonia-lyase, biosynthetic 12602 14146 1
CDS - ZP_03221190.1 SeJ_A4370 conserved hypothetical protein 14168 14953 1
CDS - ZP_03221288.1 SeJ_A4371 putative secreted protein 15352 15726 -1
CDS - ZP_03221202.1 SeJ_A4372 HTH-type transcriptional regulator IlvY 15754 16641 -1
CDS - ZP_03221339.1 SeJ_A4373 ketol-acid reductoisomerase 16805 18280 1
CDS - ZP_03221296.1 SeJ_A4374 peptidyl-prolyl cis-trans isomerase C 18372 18653 -1
CDS - ZP_03221145.1 SeJ_A4375 cyclic nucleotide-binding domain protein 18856 19548 1
CDS - ZP_03221330.1 SeJ_A4376 uridine phosphorylase 19577 20320 1
CDS - ZP_03221241.1 SeJ_A4377 intergral membrane NMN transport protein PnuC 20317 21048 1
CDS rep ZP_03221162.1 SeJ_A4378 ATP-dependent DNA helicase Rep 21148 23172 1
CDS gppA ZP_03221312.1 SeJ_A4379 guanosine-5'-triphosphate,3'-diphosphate diphosphatase 23212 24693 -1
CDS rhlB ZP_03221240.1 SeJ_A4380 ATP-dependent RNA helicase RhlB 24812 26077 -1
CDS trx ZP_03221335.1 SeJ_A4381 thioredoxin 26221 26550 1
CDS rho ZP_03221170.1 SeJ_A4382 transcription termination factor Rho 26969 28228 1
CDS wecA ZP_03221292.1 SeJ_A4383 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 28458 29561 1
CDS - ZP_03221300.1 SeJ_A4384 lipopolysaccharide biosynthesis protein WzzE 29573 30619 1
CDS - ZP_03221188.1 SeJ_A4385 UDP-N-acetylglucosamine 2-epimerase 30675 31805 1
CDS wecC ZP_03221357.1 SeJ_A4386 UDP-N-acetyl-D-mannosamine dehydrogenase 31802 33064 1
CDS rfbB2 ZP_03221228.1 SeJ_A4387 dTDP-glucose 4,6-dehydratase 33064 34131 1
CDS - ZP_03221349.1 SeJ_A4388 glucose-1-phosphate thymidylyltransferase 34164 34388 1
CDS wecD ZP_03221277.1 SeJ_A4389 TDP-D-fucosamine acetyltransferase 34366 35043 1
CDS wecE ZP_03221172.1 SeJ_A4390 TDP-4-keto-6-deoxy-D-glucose transaminase 35048 36178 1
CDS - ZP_03221220.1 SeJ_A4391 polysaccharide biosynthesis protein 36180 37430 1
CDS wecF ZP_03221331.1 SeJ_A4392 TDP-Fuc4NAc:lipid II Fuc4Nac transferase 37427 38506 1
CDS wzyE ZP_03221268.1 SeJ_A4393 ECA biosynthesis protein WzyE 38503 39861 1
CDS - ZP_03221318.1 SeJ_A4394 glycosyl transferase, WecB/TagA/CpsF family 39858 40598 1
CDS - ZP_03221216.1 SeJ_A4395 amino acid permease family protein 40805 42190 1
tRNA - - SeJ_A4396 tRNA-Arg 42293 42369 1
tRNA - - SeJ_A4397 tRNA-His 42423 42500 1
tRNA - - SeJ_A4398 tRNA-Leu 42520 42606 1
tRNA - - SeJ_A4399 tRNA-Pro 42648 42726 1
CDS - ZP_03221322.1 SeJ_A4400 hypothetical protein 42754 42918 1
CDS hemY ZP_03221225.1 SeJ_A4402 HemY protein 43306 44505 -1
CDS - ZP_03221327.1 SeJ_A4403 putative uroporphyrin-III C-methyltransferase 44505 45674 -1
CDS hemD ZP_03221310.1 SeJ_A4404 uroporphyrinogen-III synthase 45696 46436 -1
CDS hemC ZP_03221353.1 SeJ_A4405 porphobilinogen deaminase 46433 47395 -1
CDS cyaA ZP_03221219.1 SeJ_A4406 adenylate cyclase, class I 47751 50297 1
CDS - ZP_03221233.1 SeJ_A4407 putative inner membrane protein 50405 50758 1
CDS - ZP_03221342.1 SeJ_A4408 putative membrane protein 51127 51486 1
CDS cyaY ZP_03221173.1 SeJ_A4409 iron donor protein CyaY 51932 52252 -1
CDS - ZP_03221299.1 SeJ_A4410 putative inner membrane protein 52322 52711 -1
CDS - ZP_03221229.1 SeJ_A4411 conserved hypothetical protein 52690 54702 -1
CDS - ZP_03221356.1 SeJ_A4412 putative lipoprotein 54888 55091 1
CDS dapF ZP_03221215.1 SeJ_A4413 diaminopimelate epimerase 55128 55952 1
CDS - ZP_03221151.1 SeJ_A4414 conserved hypothetical protein 55949 56656 1
CDS xerC ZP_03221176.1 SeJ_A4415 tyrosine recombinase XerC 56653 57555 1
CDS - ZP_03221325.1 SeJ_A4416 HAD-superfamily hydrolase, subfamily IA, variant 1 57555 58271 1
CDS uvrD ZP_03221302.1 SeJ_A4417 DNA helicase II 58407 60569 1
CDS corA ZP_03221234.1 SeJ_A4418 magnesium and cobalt transport protein CorA 61041 61991 1
CDS - ZP_03221306.1 SeJ_A4419 conserved hypothetical protein 62594 62890 1
CDS rarD ZP_03221178.1 SeJ_A4420 RarD protein 62930 63817 -1
CDS - ZP_03221346.1 SeJ_A4421 f161 63861 64328 -1
CDS - ZP_03221209.1 SeJ_A4422 phospholipase A1 64493 65362 1
CDS recQ ZP_03221179.1 SeJ_A4423 ATP-dependent DNA helicase RecQ 65428 67275 1
CDS rhtC ZP_03221293.1 SeJ_A4424 threonine efflux protein 67339 67959 1
CDS rhtB ZP_03221212.1 SeJ_A4425 homoserine/homoserine lactone efflux protein 67999 68619 -1
CDS pldB ZP_03221304.1 SeJ_A4426 lysophospholipase L2 68730 69746 1
CDS metR ZP_03221166.1 SeJ_A4428 transcriptional regulator MetR 71430 72383 -1
CDS metE ZP_03221328.1 SeJ_A4429 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 72632 74896 1
CDS - ZP_03221231.1 SeJ_A4430 hypothetical protein 74960 75079 1
CDS - ZP_03221303.1 SeJ_A4431 chondroitin sulfate/heparin utilization regulation protein 75279 76574 1
CDS - ZP_03221271.1 SeJ_A4432 dienelactone hydrolase 76654 77529 -1
CDS udp ZP_03221313.1 SeJ_A4433 uridine phosphorylase 77725 78486 1
CDS - ZP_03221333.1 SeJ_A4434 DNA recombination protein RmuC 78626 80056 1
CDS - ZP_03221239.1 SeJ_A4435 ubiquinone/menaquinone biosynthesis methyltransferase UbiE 80152 80907 1
CDS - ZP_03221175.1 SeJ_A4436 conserved hypothetical protein 80917 81522 1
CDS ubiB ZP_03221236.1 SeJ_A4437 2-polyprenylphenol 6-hydroxylase 81519 83159 1
CDS - ZP_03221350.1 SeJ_A4438 Sec-independent protein translocase protein TatA 83366 83620 1
CDS - ZP_03221157.1 SeJ_A4439 Sec-independent protein translocase protein TatB 83624 84172 1
CDS tatC ZP_03221274.1 SeJ_A4440 twin arginine-targeting protein translocase TatC 84175 84954 1
CDS - ZP_03221291.1 SeJ_A4441 deoxyribonuclease TatD 84984 85778 1
CDS rfaH ZP_03221314.1 SeJ_A4442 transcriptional activator RfaH 85786 86274 -1
CDS ubiD ZP_03221199.1 SeJ_A4443 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 86460 87938 1
CDS - ZP_03221165.1 SeJ_A4444 oxidoreductase NAD/FAD-binding domain protein 88024 88725 1
CDS - ZP_03221194.1 SeJ_A4445 arylsulfotransferase 88979 90814 1
CDS fadA ZP_03221210.1 SeJ_A4446 acetyl-CoA C-acyltransferase FadA 91011 92174 -1
CDS fadB ZP_03221347.1 SeJ_A4447 fatty oxidation complex, alpha subunit FadB 92184 94499 -1
CDS pepQ ZP_03221230.1 SeJ_A4448 Xaa-Pro dipeptidase 94563 95894 1
CDS - ZP_03221198.1 SeJ_A4449 conserved hypothetical protein TIGR00257 95894 96508 1
CDS hemG ZP_03221164.1 SeJ_A4451 protoporphyrinogen oxidase 98009 98554 1
rRNA rrs - SeJ_A4452 16S ribosomal RNA 98939 100472 1
tRNA - - SeJ_A4453 tRNA-Ile 100543 100619 1
tRNA - - SeJ_A4454 tRNA-Ala 100730 100807 1
CDS - ZP_03221298.1 SeJ_A4455 conserved hypothetical protein 102826 102945 1
rRNA rrf - SeJ_A4456 5S ribosomal RNA 104090 104205 1
CDS mobB ZP_03221221.1 SeJ_A4457 molybdopterin-guanine dinucleotide biosynthesis protein B 104499 105038 -1
CDS mobA ZP_03221308.1 SeJ_A4458 molybdopterin-guanine dinucleotide biosynthesis protein A 105020 105604 -1
CDS - ZP_03221232.1 SeJ_A4459 conserved hypothetical protein 105674 105943 1