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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - SNSL317_A0079 tRNA-Asn 882 959 -1
CDS - ZP_02696386.1 SNSL317_A0080 conserved hypothetical protein 1059 1856 -1
tRNA - - SNSL317_A0081 tRNA-Ser 1944 2035 1
CDS - ZP_02696387.1 SNSL317_A0082 conserved hypothetical protein 2337 2498 1
CDS - ZP_02696388.1 SNSL317_A0083 protein UmuD 2625 3044 1
CDS - ZP_02696389.1 SNSL317_A0084 protein UmuC 3047 4315 1
CDS - ZP_02696393.1 SNSL317_A0086 outer membrane protein N 5439 6650 -1
CDS - ZP_02696395.1 SNSL317_A0087 hypothetical protein 7093 7224 -1
CDS - ZP_02696396.1 SNSL317_A0088 outer membrane protein N 7333 7599 1
CDS - ZP_02696397.1 SNSL317_A0089 metal dependent phosphohydrolase 7691 8386 1
CDS - ZP_02696398.1 SNSL317_A0090 modification methylase EcoRII 8460 9890 1
CDS - ZP_02696399.1 SNSL317_A0091 very short patch repair protein 9871 10341 1
CDS - ZP_02696400.1 SNSL317_A0092 carboxylate/amino acid/amine transporter 10330 11250 -1
CDS - ZP_02696401.1 SNSL317_A0093 inner membrane protein YedI 11426 12337 1
CDS - ZP_02696402.1 SNSL317_A0094 putative cytoplasmic protein 12414 12599 1
CDS - ZP_02696403.1 SNSL317_A0095 cellulose synthesis regulatory protein 12764 14476 1
CDS - ZP_02696404.1 SNSL317_A0096 mannosyl-3-phosphoglycerate phosphatase homolog 14455 15270 -1
CDS - ZP_02696405.2 SNSL317_A0098 conserved hypothetical protein 15580 15813 -1
CDS - ZP_02696406.2 SNSL317_A0099 conserved domain protein 15933 16130 1
CDS rcsA ZP_02696407.1 SNSL317_A0100 colanic acid capsular biosynthesis activation protein A 16169 16792 -1
CDS fliR ZP_02696408.1 SNSL317_A0101 flagellar biosynthetic protein FliR 17074 17868 -1
CDS fliQ ZP_02696409.1 SNSL317_A0102 flagellar biosynthetic protein FliQ 17877 18146 -1
CDS fliP ZP_02696410.1 SNSL317_A0103 flagellar biosynthetic protein FliP 18156 18893 -1
CDS - ZP_02696411.1 SNSL317_A0104 flagellar protein FliO 18893 19270 -1
CDS fliN ZP_02696412.1 SNSL317_A0105 flagellar motor switch protein FliN 19270 19683 -1
CDS fliM ZP_02696413.1 SNSL317_A0106 flagellar motor switch protein FliM 19680 20684 -1
CDS fliL ZP_02696414.1 SNSL317_A0107 flagellar basal body-associated protein FliL 20689 21156 -1
CDS - ZP_02696416.1 SNSL317_A0108 flagellar hook-length control protein 21261 22484 -1
CDS fliJ ZP_02696417.1 SNSL317_A0109 flagellar protein FliJ 22481 22924 -1
CDS fliI ZP_02696418.1 SNSL317_A0110 flagellar protein export ATPase FliI 22946 24316 -1
CDS fliH ZP_02696419.1 SNSL317_A0111 flagellar assembly protein FliH 24316 25023 -1
CDS fliG ZP_02696420.1 SNSL317_A0112 flagellar motor switch protein FliG 25016 26011 -1
CDS fliF ZP_02696421.2 SNSL317_A0114 flagellar M-ring protein FliF 26004 27743 -1
CDS - ZP_02696422.1 SNSL317_A0113 conserved hypothetical protein 27707 27856 1
CDS fliE ZP_02696423.1 SNSL317_A0115 flagellar hook-basal body complex protein 27903 28217 1
CDS - ZP_02696424.1 SNSL317_A0116 putative 50S ribosomal protein 28339 28692 -1
CDS - ZP_02696425.1 SNSL317_A0117 conserved hypothetical protein 28996 29229 -1
CDS - ZP_02696426.1 SNSL317_A0118 putative membrane protein 29226 30431 -1
CDS - ZP_02696427.1 SNSL317_A0119 YedD 30617 31030 1
CDS - ZP_02696428.1 SNSL317_A0120 cytoplasmic alpha-amylase 31070 32554 -1
CDS - ZP_02696429.1 SNSL317_A0121 flagellar protein FliT 32626 32994 -1
CDS fliS ZP_02696430.1 SNSL317_A0122 flagellar protein FliS 32994 33401 -1
CDS - ZP_02696431.1 SNSL317_A0123 flagellar hook-associated protein 2 33416 34819 -1
CDS - ZP_02696432.1 SNSL317_A0124 hypothetical protein 34798 34926 -1
CDS - ZP_02696434.1 SNSL317_A0125 flagellin 35076 36584 1
CDS - ZP_02696435.1 SNSL317_A0126 lysine-N-methylase 36663 37868 1
CDS - ZP_02696436.2 SNSL317_A0127 RNA polymerase sigma factor for flagellar operon 38065 38784 1
CDS - ZP_02696439.1 SNSL317_A0129 cystine-binding periplasmic protein 39541 40341 1
CDS - ZP_02696440.1 SNSL317_A0130 D-cysteine desulfhydrase 40495 41481 1
CDS - ZP_02696441.1 SNSL317_A0131 L-cystine transport system permease protein TcyB 41502 42170 1
CDS - ZP_02696442.1 SNSL317_A0132 putative ABC transporter, ATP-binding protein 42167 42919 1
CDS - ZP_02696443.1 SNSL317_A0133 regulatory protein SdiA 43152 43874 1
CDS - ZP_02696444.1 SNSL317_A0134 conserved hypothetical protein 43941 44165 -1
CDS uvrY ZP_02696446.1 SNSL317_A0135 response regulator UvrY 44630 45286 1
CDS uvrC ZP_02696447.1 SNSL317_A0136 excinuclease ABC, C subunit 45283 47115 1
CDS pgsA ZP_02696448.1 SNSL317_A0137 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 47172 47720 1
tRNA - - SNSL317_A0138 tRNA-Gly 47872 47947 1
tRNA - - SNSL317_A0139 tRNA-Cys 48000 48073 1
tRNA - - SNSL317_A0140 tRNA-Leu 48085 48171 1
CDS - ZP_02696449.1 SNSL317_A0141 putative inner membrane protein 48469 48753 1
CDS - ZP_02696451.1 SNSL317_A0142 putative cell wall-associated hydrolase 48973 50406 1
CDS - ZP_02696453.1 SNSL317_A0144 YecA family protein 51183 51848 1
CDS - ZP_02696454.2 SNSL317_A0145 tyrosine-specific transport protein 51923 53191 -1
CDS - ZP_02696455.1 SNSL317_A0146 conserved hypothetical protein 53361 53600 1
CDS ftnA ZP_02696456.1 SNSL317_A0147 ferritin-1 53646 54143 -1
CDS - ZP_02696457.1 SNSL317_A0148 hypothetical protein 54242 54358 -1
CDS - ZP_02696458.1 SNSL317_A0149 putative outer membrane lipoprotein 54383 54718 -1
CDS - ZP_02696459.1 SNSL317_A0150 ribose/galactose isomerase 54974 55612 1
CDS - ZP_02696460.1 SNSL317_A0151 ferritin, Dps family protein 55791 56294 -1
CDS - ZP_02696462.1 SNSL317_A0152 hypothetical protein 56634 56783 -1
CDS - ZP_02696463.1 SNSL317_A0153 ThiJ/PfpI domain protein 56845 57402 1
CDS otsB ZP_02696465.1 SNSL317_A0155 trehalose-phosphatase 58036 58839 1
CDS otsA ZP_02696466.1 SNSL317_A0156 alpha,alpha-trehalose-phosphate synthase 58814 60235 1
CDS - ZP_02696467.1 SNSL317_A0157 universal stress protein C 60253 60681 -1
CDS - ZP_02696470.1 SNSL317_A0158 hypothetical protein 61112 61255 1
CDS flhD ZP_02696471.1 SNSL317_A0159 flagellar transcriptional activator FlhD 61477 61818 1
CDS flhC ZP_02696472.2 SNSL317_A0160 flagellar transcriptional activator FlhC 61821 62399 1
CDS motA ZP_02696473.1 SNSL317_A0161 chemotaxis protein MotA 62525 63412 1
CDS motB ZP_02696474.1 SNSL317_A0162 chemotaxis protein MotB 63409 64338 1
CDS - ZP_02696475.1 SNSL317_A0163 chemotaxis protein CheA 64349 66358 1
CDS - ZP_02696476.1 SNSL317_A0164 purine binding chemotaxis protein 66379 66882 1
CDS - ZP_02696477.2 SNSL317_A0165 methyl-accepting chemotaxis protein II 66888 68780 1
CDS cheR ZP_02696478.1 SNSL317_A0166 chemotaxis protein methyltransferase CheR 68934 69800 1
CDS cheB ZP_02696479.1 SNSL317_A0167 chemotaxis response regulator protein-glutamate methylesterase CheB 69797 70846 1
CDS cheY ZP_02696480.1 SNSL317_A0168 chemotaxis response regulator CheY 70864 71253 1
CDS - ZP_02696481.1 SNSL317_A0169 chemotaxis protein CheZ 71264 71908 1
CDS flhB ZP_02696482.1 SNSL317_A0170 flagellar biosynthetic protein FlhB 72102 73253 1
CDS flhA ZP_02696483.1 SNSL317_A0171 flagellar biosynthesis protein FlhA 73246 75324 1
CDS - ZP_02696484.1 SNSL317_A0172 flagellar protein FlhE 75324 75716 1
CDS mrdA ZP_02696486.1 SNSL317_A0175 penicillin-binding protein 2 77146 79017 -1
CDS argS ZP_02696488.1 SNSL317_A0176 arginyl-tRNA synthetase 79206 80939 -1
CDS - ZP_02696489.1 SNSL317_A0177 hypothetical protein 80955 81071 -1
CDS - ZP_02696490.1 SNSL317_A0178 protein YecM 81176 81745 1
CDS - ZP_02696491.1 SNSL317_A0179 copper homeostasis protein CutC 81765 82511 1
CDS - ZP_02696492.1 SNSL317_A0180 putative methyltransferase 82747 83718 -1
CDS - ZP_02696493.1 SNSL317_A0181 putative methyltransferase 83715 84458 -1
CDS - ZP_02696494.1 SNSL317_A0182 putative inner membrane protein 84499 84894 -1
CDS - ZP_02696495.1 SNSL317_A0183 conserved hypothetical protein 84947 85765 -1
CDS - ZP_02696496.1 SNSL317_A0184 isochorismatase family protein 85762 86328 -1
CDS aspS ZP_02696498.1 SNSL317_A0185 aspartyl-tRNA synthetase 86653 88425 1