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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_03080074.1 SNSL317_A3592 putative inner membrane protein 297 422 1
CDS - ZP_02697284.1 SNSL317_A3593 putative lipoprotein 876 1097 -1
CDS - ZP_02697285.1 SNSL317_A3594 AcrB protein 1333 4446 -1
CDS - ZP_02697286.1 SNSL317_A3595 acriflavine resistance protein E 4458 5615 -1
CDS - ZP_02697289.1 SNSL317_A3596 conserved hypothetical protein 5798 5956 -1
CDS - ZP_02697290.1 SNSL317_A3597 transcriptional repressor 6029 6691 1
CDS - ZP_02697291.1 SNSL317_A3598 ggdef domain/eal domain protein 6694 8793 -1
CDS - ZP_02697292.1 SNSL317_A3599 putative periplasmic protein 8944 9108 -1
CDS - ZP_02697293.1 SNSL317_A3600 DNA methylase 9191 10075 -1
CDS fis ZP_02697294.1 SNSL317_A3601 DNA-binding protein Fis 10161 10457 -1
CDS dusB ZP_02697295.1 SNSL317_A3602 tRNA-dihydrouridine synthase B 10483 11448 -1
CDS prmA ZP_02697297.1 SNSL317_A3603 ribosomal protein L11 methyltransferase 12109 12990 -1
CDS panF ZP_02697298.1 SNSL317_A3604 sodium/pantothenate symporter 13002 14453 -1
CDS - ZP_02697299.1 SNSL317_A3605 putative membrane protein 14443 14685 -1
CDS accC ZP_02697300.1 SNSL317_A3606 acetyl-CoA carboxylase, biotin carboxylase 14794 16143 -1
CDS accB ZP_02697301.1 SNSL317_A3607 acetyl-CoA carboxylase, biotin carboxyl carrier protein 16154 16624 -1
CDS - ZP_02697304.1 SNSL317_A3608 membrane protein YedZ 17017 17616 -1
CDS - ZP_02697305.1 SNSL317_A3609 protein YedY 17617 18621 -1
CDS - ZP_02697306.1 SNSL317_A3610 protein YhdH 18734 19708 -1
CDS - ZP_02697307.1 SNSL317_A3611 cyclic diguanylate phosphodiesterase (EAL) domain protein 19912 21852 1
CDS mreB ZP_02697309.1 SNSL317_A3612 rod shape-determining protein MreB 22160 23203 1
CDS mreC ZP_02697310.1 SNSL317_A3613 rod shape-determining protein MreC 23268 24320 1
CDS lytS ZP_02697311.1 SNSL317_A3614 rod shape-determining protein MreD 24320 24811 1
CDS maf ZP_02697312.1 SNSL317_A3615 septum formation protein Maf 24820 25413 1
CDS cafA ZP_02697313.1 SNSL317_A3616 ribonuclease G 25403 26872 1
CDS - ZP_02697314.2 SNSL317_A3617 conserved hypothetical protein 26979 30779 1
CDS tldD ZP_02697315.1 SNSL317_A3618 protein TldD 30924 32369 1
CDS aaeR ZP_02697316.2 SNSL317_A3619 transcriptional activator AaeR 32492 33421 -1
CDS aaeX ZP_02697317.1 SNSL317_A3620 protein AaeX 33603 33806 1
CDS aaeA ZP_02697318.1 SNSL317_A3621 p-hydroxybenzoic acid efflux pump subunit aaeA 33814 34746 1
CDS aaeB ZP_02697319.1 SNSL317_A3622 p-hydroxybenzoic acid efflux pump subunit aaeB 34752 36719 1
CDS - ZP_02697320.1 SNSL317_A3623 barstar 36891 37163 1
CDS - ZP_02697321.1 SNSL317_A3624 conserved hypothetical protein 37223 37489 -1
CDS - ZP_02697322.1 SNSL317_A3625 protein YhcN 37593 37856 -1
CDS argR ZP_02697324.1 SNSL317_A3626 arginine repressor 38221 38691 -1
CDS mdh ZP_02697327.1 SNSL317_A3627 malate dehydrogenase, NAD-dependent 39106 40044 1
CDS - ZP_02697328.1 SNSL317_A3628 putative GntR-family transcriptional regulator 40164 40793 1
CDS - ZP_02697329.1 SNSL317_A3629 transcriptional regulator 40780 41445 1
CDS - ZP_02697330.2 SNSL317_A3630 anion transporter 41584 42924 1
CDS - ZP_02697331.1 SNSL317_A3631 L(+)-tartrate dehydratase subunit alpha (L-TTD alpha) 42957 43856 1
CDS - ZP_02697332.1 SNSL317_A3632 L(+)-tartrate dehydratase subunit beta (L-TTD beta) 43856 44473 1
CDS - ZP_02697333.1 SNSL317_A3633 oxaloacetate decarboxylase gamma chain 2 44630 44878 1
CDS oadA ZP_02697334.1 SNSL317_A3634 oxaloacetate decarboxylase alpha subunit 44894 46663 1
CDS - ZP_02697335.1 SNSL317_A3635 oxaloacetate decarboxylase beta chain 46676 47977 1
CDS - ZP_02697336.2 SNSL317_A3636 putative inner membrane protein 48066 48728 1
CDS degS ZP_02697337.1 SNSL317_A3637 periplasmic serine peptidase DegS 48762 49832 -1
CDS - ZP_02697339.1 SNSL317_A3638 protease DegQ 49925 51292 -1
CDS - ZP_02697340.1 SNSL317_A3639 conserved hypothetical protein 51449 51847 -1
CDS - ZP_02697341.1 SNSL317_A3640 ATPase, AFG1 family 52040 53164 1
CDS rplM ZP_02697342.1 SNSL317_A3641 ribosomal protein L13 53466 53894 1
CDS rpsI ZP_02697343.1 SNSL317_A3642 ribosomal protein S9 53910 54302 1
CDS sspA ZP_02697346.1 SNSL317_A3644 stringent starvation protein A 55517 56155 1
CDS sspB ZP_02697347.1 SNSL317_A3645 stringent starvation protein B 56161 56661 1
CDS - ZP_02697348.1 SNSL317_A3646 transcriptional regulator NanR 56779 57561 1
CDS nanA ZP_02697349.1 SNSL317_A3647 N-acetylneuraminate lyase 57696 58589 1
CDS - ZP_02697350.1 SNSL317_A3648 putative sialic acid transporter 58705 60195 1
CDS - ZP_02697351.1 SNSL317_A3649 bifunctional enzyme NanE/nanK 60242 60931 1
CDS - ZP_02697352.1 SNSL317_A3650 putative N-acetylmannosamine kinase 60928 61803 1
CDS - ZP_02697353.1 SNSL317_A3651 putative cytoplasmic protein 61800 62267 1
CDS - ZP_02697354.1 SNSL317_A3652 cytosine deaminase 62350 63630 -1
CDS - ZP_02697355.2 SNSL317_A3653 cytosine permease 63617 64894 -1
CDS - ZP_02697356.1 SNSL317_A3654 putative cytoplasmic protein 64986 66089 -1
CDS gltD ZP_02697357.1 SNSL317_A3655 glutamate synthase (NADPH), small subunit 66296 67714 -1
CDS - ZP_02697362.1 SNSL317_A3657 radical SAM protein, TIGR01212 family 72856 73785 1
CDS - ZP_02697363.1 SNSL317_A3658 aerobic respiration control sensor protein ArcB 73879 76215 1
CDS elbB ZP_02697364.1 SNSL317_A3660 enhancing lycopene biosynthesis protein 2 76442 77095 1
CDS mtgA ZP_02697365.1 SNSL317_A3661 monofunctional biosynthetic peptidoglycan transglycosylase 77092 77820 1
CDS - ZP_02697366.1 SNSL317_A3662 conserved hypothetical protein 77895 78527 -1
CDS ptsO ZP_02697367.1 SNSL317_A3663 phosphocarrier protein NPr 78776 79048 -1
CDS - ZP_02697368.1 SNSL317_A3664 conserved hypothetical protein 79045 79899 -1
CDS ptsN ZP_02697369.1 SNSL317_A3665 PTS IIA-like nitrogen-regulatory protein PtsN 79945 80436 -1
CDS yfiA ZP_02697370.1 SNSL317_A3666 ribosomal subunit interface protein 80554 80841 -1
CDS rpoN ZP_02697371.1 SNSL317_A3667 RNA polymerase sigma-54 factor 80864 82297 -1
CDS lptB ZP_02697372.1 SNSL317_A3668 lipopolysaccharide ABC transporter, ATP-binding protein 82345 83070 -1
CDS lptA ZP_02697373.1 SNSL317_A3669 lipopolysaccharide ABC transporter, periplasmic lipopolysaccharide-binding protein 83077 83631 -1
CDS - ZP_02697374.1 SNSL317_A3670 conserved hypothetical protein 83600 84175 -1
CDS kdsC ZP_02697375.1 SNSL317_A3671 3-deoxy-manno-octulosonate-8-phosphatase 84172 84738 -1
CDS kdsD ZP_02697376.1 SNSL317_A3672 arabinose 5-phosphate isomerase 84759 85745 -1
CDS - ZP_02697377.1 SNSL317_A3673 sodium/calcium exchanger protein 85759 86736 -1
CDS - ZP_02697378.1 SNSL317_A3674 toluene ABC transporter, ATP-binding protein 86949 87761 1
CDS - ZP_02697379.1 SNSL317_A3675 toluene ABC transporter, permease protein 87769 88551 1
CDS - ZP_02697380.1 SNSL317_A3676 Mce family protein 88556 89107 1
CDS ttg2D ZP_02697381.1 SNSL317_A3677 toluene tolerance protein Ttg2D 89126 89761 1
CDS - ZP_02697382.1 SNSL317_A3678 conserved hypothetical protein 89761 90057 1
CDS - ZP_02697384.2 SNSL317_A3679 protein YrbA 90245 90499 1
CDS murA ZP_02697385.1 SNSL317_A3680 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 90553 91812 1
CDS - ZP_02697386.1 SNSL317_A3681 transcriptional regulator 91871 92158 -1
CDS ispB ZP_02697387.2 SNSL317_A3682 octaprenyl-diphosphate synthase 92391 93503 -1
CDS rplU ZP_02697389.1 SNSL317_A3683 ribosomal protein L21 93620 93931 1
CDS rpmA ZP_02697390.1 SNSL317_A3684 ribosomal protein L27 93951 94208 1
CDS - ZP_02697391.1 SNSL317_A3685 putative transporter 94338 95303 1
CDS - ZP_02697392.1 SNSL317_A3686 GTP-binding protein Obg/CgtA 95319 96491 1
CDS - ZP_02697393.1 SNSL317_A3687 hypothetical protein 96488 96613 -1
CDS dacB ZP_02697394.1 SNSL317_A3688 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 96622 98055 -1
CDS greA ZP_02697396.1 SNSL317_A3689 transcription elongation factor GreA 98303 98779 1
CDS - ZP_02697397.1 SNSL317_A3690 putative RNA-binding protein 98935 99267 -1
CDS rrmJ ZP_02697398.1 SNSL317_A3691 ribosomal RNA large subunit methyltransferase J 99355 99981 1
CDS hflB ZP_02697399.2 SNSL317_A3692 ATP-dependent metallopeptidase HflB 100076 102019 1
CDS - ZP_02697400.1 SNSL317_A3694 hypothetical protein 102043 102171 -1
CDS folP ZP_02697401.1 SNSL317_A3693 dihydropteroate synthase 102124 102972 1