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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02698088.1 SNSL317_A1695 D,D-heptose 1,7-bisphosphate phosphatase 149 715 -1
CDS metN ZP_02698089.1 SNSL317_A1696 D-methionine ABC transporter, ATP-binding protein 905 1936 1
CDS metI ZP_02698090.1 SNSL317_A1697 D-methionine ABC transporter, permease protein 1929 2582 1
CDS metQ ZP_02698091.1 SNSL317_A1698 D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein 2621 3436 1
CDS rcsF ZP_03080088.1 SNSL317_A1699 exopolysaccharide synthesis regulator RcsF 3828 3959 1
CDS - ZP_03080099.1 SNSL317_A1700 conserved hypothetical protein 3923 4663 1
CDS proS ZP_02698095.1 SNSL317_A1701 prolyl-tRNA synthetase 4774 6492 1
CDS - ZP_02698096.1 SNSL317_A1702 copper homeostasis protein CutF 6566 7267 -1
CDS - ZP_02698097.1 SNSL317_A1703 peptidyl-tRNA hydrolase domain protein 7299 7721 -1
CDS - ZP_02698098.1 SNSL317_A1704 conserved hypothetical protein 7718 8263 -1
CDS - ZP_02698099.1 SNSL317_A1705 conserved hypothetical protein 8461 8661 1
CDS rof ZP_03080098.1 SNSL317_A1706 rof protein 8714 8908 1
CDS - ZP_02698102.1 SNSL317_A1707 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) 8992 10284 -1
CDS - ZP_02698103.1 SNSL317_A1708 glyoxylase family protein 10347 10736 -1
CDS - ZP_02698104.1 SNSL317_A1709 lysine decarboxylase, constitutive 10792 12933 -1
CDS - ZP_02698105.1 SNSL317_A1710 endochitinase 13009 14772 -1
CDS accA ZP_02698106.1 SNSL317_A1711 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 14953 15912 -1
CDS dnaE ZP_02698107.1 SNSL317_A1712 DNA polymerase III, alpha subunit 15925 19407 -1
CDS rnhB ZP_02698108.1 SNSL317_A1713 ribonuclease HII 19431 20027 -1
CDS lpxB ZP_02698109.1 SNSL317_A1714 lipid-A-disaccharide synthase 20024 21172 -1
CDS lpxA ZP_02698110.1 SNSL317_A1715 acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase 21172 21960 -1
CDS fabZ ZP_02698111.1 SNSL317_A1716 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 21964 22419 -1
CDS lpxD ZP_02698113.1 SNSL317_A1717 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 22525 23550 -1
CDS skp ZP_02698114.1 SNSL317_A1718 chaperone protein Skp 23554 24039 -1
CDS yaeT ZP_02698115.1 SNSL317_A1719 outer membrane protein assembly complex, YaeT protein 24162 26576 -1
CDS rseP ZP_02698116.1 SNSL317_A1720 RIP metalloprotease RseP 26608 27960 -1
CDS cdsA1 ZP_02698117.1 SNSL317_A1721 phosphatidate cytidylyltransferase 27972 28829 -1
CDS uppS ZP_02698118.1 SNSL317_A1722 di-trans,poly-cis-decaprenylcistransferase 28842 29600 -1
CDS dxr ZP_02698120.2 SNSL317_A1723 1-deoxy-D-xylulose 5-phosphate reductoisomerase 29913 31196 -1
CDS frr ZP_02698121.1 SNSL317_A1724 ribosome releasing factor 31251 31808 -1
CDS pyrH ZP_02698122.1 SNSL317_A1725 UMP kinase 31955 32680 -1
CDS tsf ZP_02698123.1 SNSL317_A1726 translation elongation factor Ts 32825 33676 -1
CDS rpsB ZP_02698124.1 SNSL317_A1727 ribosomal protein S2 33934 34659 -1
CDS map ZP_02698126.1 SNSL317_A1729 methionine aminopeptidase, type I 35110 35904 1
CDS glnD ZP_02698128.1 SNSL317_A1730 protein-P-II uridylyltransferase 36142 38814 1
CDS dapD ZP_02698129.1 SNSL317_A1731 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 38844 39668 1
CDS - ZP_02698130.1 SNSL317_A1732 shikimate transporter 39705 41006 -1
CDS - ZP_02698131.1 SNSL317_A1733 protein YaeH 41253 41639 1
CDS - ZP_02698132.1 SNSL317_A1734 carbohydrate diacid regulator 41728 42885 -1
CDS degP ZP_02698133.1 SNSL317_A1735 protease Do 43038 44465 -1
CDS dgt ZP_02698134.2 SNSL317_A1736 deoxyguanosinetriphosphate triphosphohydrolase 44595 46154 -1
CDS mtnN ZP_02698135.1 SNSL317_A1737 MTA/SAH nucleosidase 46197 46895 1
CDS - ZP_02698136.2 SNSL317_A1738 cobalamin periplasmic binding protein 46900 47688 1
CDS - ZP_02698137.1 SNSL317_A1739 inner membrane protein YadS 47725 48348 1
CDS yadR ZP_02698138.1 SNSL317_A1740 iron-sulfur cluster assembly accessory protein YadR 48449 48793 -1
CDS - ZP_02698139.1 SNSL317_A1741 H(+)/Cl(-) exchange transporter ClcA (ClC-ec1) 48875 50296 -1
CDS hemL ZP_02698141.1 SNSL317_A1743 glutamate-1-semialdehyde-2,1-aminomutase 50466 51746 1
CDS - ZP_02698142.1 SNSL317_A1744 conserved hypothetical protein 51854 52624 -1
CDS - ZP_02698143.1 SNSL317_A1745 minor fimbrial subunit StfG 52693 53223 -1
CDS - ZP_02698144.1 SNSL317_A1746 fimbrial subunit 53223 53699 -1
CDS - ZP_02698145.1 SNSL317_A1747 putative minor fimbrial subunit 53696 54208 -1
CDS - ZP_02698146.1 SNSL317_A1748 chaperone protein PapD 54227 54979 -1
CDS - ZP_02698147.1 SNSL317_A1749 fimbrial usher protein 54997 57654 -1
CDS - ZP_02698148.1 SNSL317_A1750 putative fimbrial subunit 57740 58300 -1
CDS - ZP_03080093.1 SNSL317_A1751 hypothetical protein 58517 58708 -1
CDS - ZP_03080104.1 SNSL317_A1752 hypothetical protein 58712 58837 1
CDS - ZP_02698149.2 SNSL317_A1753 hypothetical protein 58998 59204 -1
CDS - ZP_02698150.1 SNSL317_A1754 ferrichrome transport system permease protein FhuB 59241 61298 -1
CDS - ZP_02698151.1 SNSL317_A1755 ferrichrome-binding periplasmic protein 61295 62185 -1
CDS fhuC ZP_02698152.1 SNSL317_A1756 ferrichrome transport ATP-binding protein FhuC 62185 62982 -1
CDS fhuA ZP_02698153.2 SNSL317_A1757 ferrichrome-iron receptor 63031 65142 -1
CDS - ZP_02698154.2 SNSL317_A1758 hypothetical protein 65234 65374 1
CDS mrcB ZP_02698155.1 SNSL317_A1759 penicillin-binding protein 1B 65513 68035 -1
CDS hrpB ZP_02698157.1 SNSL317_A1760 ATP-dependent helicase HrpB 68176 70650 -1
CDS - ZP_02698158.1 SNSL317_A1761 2'-5' RNA ligase 70678 71208 1
CDS sfsA ZP_02698159.1 SNSL317_A1762 sugar fermentation stimulation protein 71225 71929 1
CDS dksA ZP_02698160.1 SNSL317_A1763 RNA polymerase-binding protein DksA 72106 72561 1
CDS - ZP_02698161.2 SNSL317_A1764 glutamyl-Q tRNA 72585 73526 1
CDS - ZP_02698162.2 SNSL317_A1765 poly(A) polymerase (PAP) (Plasmid copy number protein) 73772 75085 1
CDS folK ZP_02698163.1 SNSL317_A1766 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 75082 75561 1
CDS panB ZP_02698164.1 SNSL317_A1767 3-methyl-2-oxobutanoate hydroxymethyltransferase 75682 76473 1
CDS panC ZP_02698166.1 SNSL317_A1768 pantoate--beta-alanine ligase 76599 77453 1
CDS panD ZP_02698167.1 SNSL317_A1769 aspartate 1-decarboxylase 77548 77928 1
CDS - ZP_02698168.1 SNSL317_A1770 polysaccharide deacetylase domain protein 77935 79158 -1
CDS - ZP_02698169.1 SNSL317_A1771 PTS system, IIA component 79226 79666 -1
CDS - ZP_03080086.1 SNSL317_A1772 hypothetical protein 79708 79821 1
CDS - ZP_02698170.1 SNSL317_A1773 putative fimbrial subunit 80036 80575 1
CDS - ZP_02698171.1 SNSL317_A1774 chaperone protein FimC 80623 81306 1
CDS - ZP_02698172.1 SNSL317_A1775 outer membrane usher protein FimD 81333 83879 1
CDS - ZP_02698173.1 SNSL317_A1776 putative fimbrial protein precurosr 83888 84967 1
CDS - ZP_02698174.1 SNSL317_A1777 ABC transporter, permease protein 85087 85857 -1
CDS - ZP_02698175.1 SNSL317_A1778 ABC transporter, ATP-binding protein 85854 86780 -1
CDS - ZP_02698176.1 SNSL317_A1779 carbonate dehydratase 86889 87551 1
CDS hpt ZP_02698177.1 SNSL317_A1780 hypoxanthine phosphoribosyltransferase 87609 88145 -1
CDS gcd ZP_02698178.1 SNSL317_A1781 quinoprotein glucose dehydrogenase 88351 90741 1
CDS - ZP_02698179.1 SNSL317_A1782 blue copper oxidase CueO 90819 92429 -1
CDS - ZP_02698180.2 SNSL317_A1783 conserved hypothetical protein 92592 92978 1
CDS speE ZP_02698181.1 SNSL317_A1784 spermidine synthase 93085 93945 1
CDS speD ZP_02698182.1 SNSL317_A1785 S-adenosylmethionine decarboxylase proenzyme 93966 94760 1
CDS - ZP_02698183.1 SNSL317_A1786 DeoR-family transcriptional regulator 94790 95557 -1
CDS pdxA ZP_02698184.1 SNSL317_A1787 4-hydroxythreonine-4-phosphate dehydrogenase 95567 96550 -1
CDS - ZP_02698185.1 SNSL317_A1788 putative inner membrane protein 96540 97811 -1
CDS - ZP_02698186.2 SNSL317_A1789 2-keto-3-deoxygluconate permease 97808 98821 -1
CDS - ZP_02698187.1 SNSL317_A1790 protein YacL 98997 99359 -1
CDS - ZP_02698188.1 SNSL317_A1791 low molecular weight phosphotyrosine protein phosphatase 99630 99953 1
CDS - ZP_02698189.1 SNSL317_A1792 conserved hypothetical protein 100370 100834 1
CDS acnB ZP_02698190.1 SNSL317_A1793 aconitate hydratase 2 100874 103471 -1
CDS - ZP_02698191.1 SNSL317_A1794 putative outer membrane protein 103860 105482 1
CDS - ZP_02698192.1 SNSL317_A1795 probable secreted protein 105495 106286 1
CDS - ZP_02698193.1 SNSL317_A1796 probable secreted protein 106324 106608 -1