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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02698666.1 SNSL317_A4564 inner membrane transport protein YieO 837 2264 1
CDS - ZP_02698667.2 SNSL317_A4565 ribose operon repressor 2230 3228 -1
CDS rbsK ZP_02698668.1 SNSL317_A4566 ribokinase 3232 4161 -1
CDS rbsB ZP_02698669.1 SNSL317_A4567 ribose ABC transporter, periplasmic ribose-binding protein 4294 5184 -1
CDS rbsC ZP_02698670.1 SNSL317_A4568 ribose ABC transporter, permease protein 5209 6174 -1
CDS rbsA ZP_02698671.1 SNSL317_A4569 ribose ABC transporter, ATP-binding protein 6180 7685 -1
CDS rbsD ZP_02698672.1 SNSL317_A4570 cytoplasmic D-ribose-binding protein RbsD 7693 8112 -1
CDS kup ZP_02698673.1 SNSL317_A4571 potassium uptake protein 8330 10198 -1
CDS - ZP_02698674.1 SNSL317_A4572 ATPase RavA 10546 12042 1
CDS - ZP_02698675.1 SNSL317_A4573 protein ViaA 12036 13487 1
CDS asnA ZP_02698676.1 SNSL317_A4574 aspartate--ammonia ligase 13492 14484 -1
CDS asnC ZP_02698678.1 SNSL317_A4575 regulatory protein AsnC 14635 15093 1
CDS mioC ZP_02698679.1 SNSL317_A4576 MioC protein 15183 15626 1
CDS gidA ZP_02698680.1 SNSL317_A4577 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 16005 17894 1
CDS gidB ZP_02698681.1 SNSL317_A4578 16S rRNA methyltransferase GidB 17997 18620 1
CDS - ZP_03080126.1 SNSL317_A4579 hypothetical protein 18733 18870 1
CDS - ZP_02698684.1 SNSL317_A4580 conserved hypothetical protein 18978 19121 1
CDS atpI ZP_02698685.2 SNSL317_A4581 ATP synthase F0, I subunit 19491 19616 1
CDS atpB ZP_02698686.1 SNSL317_A4582 ATP synthase F0, A subunit 19625 20440 1
CDS atpE ZP_02698687.1 SNSL317_A4583 ATP synthase F0, C subunit 20487 20726 1
CDS atpF ZP_02698688.1 SNSL317_A4584 ATP synthase F0, B subunit 20786 21256 1
CDS atpH ZP_02698689.1 SNSL317_A4585 ATP synthase F1, delta subunit 21271 21804 1
CDS atpA ZP_02698690.1 SNSL317_A4586 ATP synthase F1, alpha subunit 21817 23358 1
CDS atpG ZP_02698691.1 SNSL317_A4587 ATP synthase F1, gamma subunit 23409 24272 1
CDS atpD ZP_02698692.1 SNSL317_A4588 ATP synthase F1, beta subunit 24299 25681 1
CDS atpC ZP_02698693.2 SNSL317_A4589 ATP synthase F1, epsilon subunit 25708 26121 1
CDS - ZP_02698695.1 SNSL317_A4590 putative membrane protein 26351 27049 1
CDS glmU ZP_02698697.1 SNSL317_A4591 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 27369 28739 1
CDS glmS ZP_02698698.1 SNSL317_A4592 glutamine-fructose-6-phosphate transaminase 28928 30757 1
CDS - ZP_02698699.2 SNSL317_A4593 HTH-type transcriptional regulator SgrR 30908 32698 -1
CDS - ZP_02698700.1 SNSL317_A4594 shikimate 5-dehydrogenase 32760 33578 1
CDS - ZP_02698701.1 SNSL317_A4595 pts system fructose-specific eiibc component 33627 35000 1
CDS pstS ZP_02698702.1 SNSL317_A4596 phosphate ABC transporter, periplasmic phosphate-binding protein PstS 35166 36206 1
CDS pstC ZP_02698703.1 SNSL317_A4597 phosphate ABC transporter, permease protein PstC 36342 37301 1
CDS pstA ZP_02698704.1 SNSL317_A4598 phosphate ABC transporter, permease protein PstA 37301 38191 1
CDS pstB ZP_02698705.2 SNSL317_A4599 phosphate ABC transporter, ATP-binding protein 38242 39051 1
CDS phoU ZP_02698706.1 SNSL317_A4600 phosphate transport system regulatory protein PhoU 39066 39791 1
CDS - ZP_02698707.1 SNSL317_A4601 HAD hydrolase, IA family 39886 40551 -1
CDS - ZP_02698709.1 SNSL317_A4602 inner membrane protein YicO 40720 42057 1
CDS - ZP_02698710.1 SNSL317_A4603 YieF 42102 42668 -1
CDS - ZP_02698711.1 SNSL317_A4604 o252 42686 43441 -1
CDS - ZP_02698712.1 SNSL317_A4605 HTH-type transcriptional regulator YidZ 43599 44558 -1
CDS - ZP_02698713.1 SNSL317_A4606 multidrug resistance protein MdtL 44527 45714 -1
CDS - ZP_03080120.1 SNSL317_A4607 hypothetical protein 46237 46365 -1
CDS - ZP_02698714.1 SNSL317_A4608 conserved hypothetical protein 46694 47563 1
CDS - ZP_02698715.2 SNSL317_A4609 RNA-directed DNA polymerase from retron EC86 47868 48821 1
CDS trmE ZP_02698717.1 SNSL317_A4612 tRNA modification GTPase TrmE 50003 51367 -1
CDS - ZP_02698719.1 SNSL317_A4613 inner membrane protein OxaA 51509 53155 -1
CDS rnpA ZP_02698721.1 SNSL317_A4614 ribonuclease P protein component 53379 53738 -1
CDS rpmH ZP_03080115.1 SNSL317_A4615 ribosomal protein L34 53755 53895 -1
CDS dnaA ZP_02698723.1 SNSL317_A4616 chromosomal replication initiator protein DnaA 54556 55956 1
CDS dnaN ZP_02698724.1 SNSL317_A4617 DNA polymerase III, beta subunit 55961 57061 1
CDS - ZP_02698726.1 SNSL317_A4618 DNA replication and repair protein RecF 57209 58282 1
CDS gyrB ZP_02698727.1 SNSL317_A4619 DNA gyrase, B subunit 58311 60725 1
CDS - ZP_02698728.1 SNSL317_A4620 putative transcriptional regulator 60744 61640 -1
CDS - ZP_02698729.1 SNSL317_A4621 mandelate racemase/muconate lactonizing enzyme family protein 61755 62945 -1
CDS - ZP_02698730.1 SNSL317_A4622 putative membrane transport protein 62962 64224 -1
CDS - ZP_02698731.1 SNSL317_A4623 phosphatase YidA 64531 65376 1
CDS dgoR ZP_02698732.1 SNSL317_A4624 galactonate operon transcriptional repressor 65637 66326 1
CDS - ZP_02698733.1 SNSL317_A4625 2-dehydro-3-deoxygalactonokinase 66323 67201 1
CDS - ZP_02698734.1 SNSL317_A4626 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 67185 67802 1
CDS - ZP_02698735.1 SNSL317_A4627 galactonate dehydratase 67799 68947 1
CDS - ZP_02698736.2 SNSL317_A4628 d-galactonate transporter 69071 70369 1
CDS torS ZP_02698737.2 SNSL317_A4630 sensor protein torS 70395 73082 -1
CDS - ZP_02698738.1 SNSL317_A4629 hypothetical protein 73069 73185 1
CDS torT ZP_02698739.1 SNSL317_A4631 tmao reductase system periplasmic protein tort 73210 74250 1
CDS - ZP_02698740.2 SNSL317_A4632 TorCAD operon transcriptional regulatory protein TorR 74223 74951 -1
CDS torC ZP_02698742.1 SNSL317_A4633 trimethylamine-N-oxide reductase c-type cytochrome TorC 75045 76229 1
CDS torA ZP_02698743.1 SNSL317_A4634 trimethylamine-N-oxide reductase TorA 76219 78771 1
CDS - ZP_02698744.1 SNSL317_A4635 chaperone protein TorD 78764 79396 1
CDS - ZP_02698745.1 SNSL317_A4636 cytoChrome-c peroxidase 79586 80986 1
CDS ccmA ZP_02698746.1 SNSL317_A4637 heme ABC exporter, ATP-binding protein CcmA 80983 81609 1
CDS ccmB ZP_02698747.2 SNSL317_A4638 heme exporter protein CcmB 81606 82265 1
CDS - ZP_03080119.1 SNSL317_A4639 ABC superfamily protein 82308 83054 1
CDS ccmD ZP_03080113.1 SNSL317_A4640 heme exporter protein CcmD 83090 83263 1
CDS - ZP_02698750.1 SNSL317_A4641 ABC superfamily protein 83260 83739 1
CDS ccmF ZP_02698751.1 SNSL317_A4642 cytochrome c-type biogenesis protein CcmF 83736 85667 1
CDS - ZP_02698752.1 SNSL317_A4643 heme lyase disulfide oxidoreduCtase, cytocyhrome c-type biogenesis 85664 86221 1
CDS - ZP_02698753.1 SNSL317_A4644 cytochrome c-type biogenesis protein H2 86218 87261 1
CDS - ZP_02698754.1 SNSL317_A4645 putative ATP/GTP-binding protein 87383 88609 1
CDS - ZP_02698755.2 SNSL317_A4647 conserved outer membrane protein 88611 88901 -1
CDS - ZP_02698756.1 SNSL317_A4646 conserved hypothetical protein 88870 88989 1
CDS ibpA ZP_02698758.2 SNSL317_A4648 small heat shock protein IbpA 89253 89666 1
CDS ibpB ZP_02698759.1 SNSL317_A4649 small heat shock protein IbpB 89776 90204 1
CDS - ZP_02698760.1 SNSL317_A4650 putative potassium uptake protein TrkA 90393 92054 1
CDS - ZP_02698762.1 SNSL317_A4651 hypothetical protein 92216 92344 -1
CDS - ZP_02698764.1 SNSL317_A4652 hypothetical protein 92344 92478 1
CDS - ZP_02698765.1 SNSL317_A4653 inner membrane protein YidH 92498 92845 1
CDS - ZP_02698766.1 SNSL317_A4654 inner membrane protein YidG 92835 93197 1
CDS - ZP_02698767.1 SNSL317_A4655 f165 93194 93724 1
CDS dsdA ZP_02698768.1 SNSL317_A4656 D-serine ammonia-lyase 93806 95128 -1
CDS - ZP_02698769.1 SNSL317_A4657 DsdX permease 95146 96483 -1
CDS dsdC ZP_03080110.1 SNSL317_A4658 D-serine deaminase transcriptional activator 96694 97632 1
CDS emrD ZP_03080114.1 SNSL317_A4659 multidrug resistance protein D 98708 99868 -1
CDS - ZP_02698776.2 SNSL317_A4660 integral membrane protein 100095 100955 -1
CDS ilvB ZP_02698780.1 SNSL317_A4661 acetolactate synthase, large subunit, biosynthetic type 101976 103664 1
CDS ilvN ZP_02698781.1 SNSL317_A4662 acetolactate synthase, small subunit 103668 103958 1
CDS - ZP_02698782.1 SNSL317_A4663 deoxyribose operon repressor 103960 104745 -1
CDS rbsK ZP_02698783.1 SNSL317_A4664 ribokinase 105059 105979 1
CDS fucP ZP_02698784.1 SNSL317_A4665 L-fucose:H+ symporter permease 106010 107326 1