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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - SNSL317_A2603 tRNA-Asp 175 253 1
CDS dkgB ZP_02699189.2 SNSL317_A2604 2,5-didehydrogluconate reductase B 396 1220 1
CDS - ZP_02699190.1 SNSL317_A2605 LysR substrate binding domain protein 1241 2155 -1
CDS - ZP_02699191.1 SNSL317_A2606 inner membrane transport protein YdhP 2260 3435 1
CDS - ZP_03080137.1 SNSL317_A2607 protein YafD 3567 4367 1
CDS - ZP_02699194.1 SNSL317_A2608 methyltransferase, UbiE/COQ5 family 4445 5215 1
CDS mltD ZP_02699195.2 SNSL317_A2609 membrane-bound lytic murein transglycosylase D 5271 6491 -1
CDS gloB ZP_02699196.1 SNSL317_A2610 hydroxyacylglutathione hydrolase 6710 7465 -1
CDS - ZP_02699197.1 SNSL317_A2611 putative methyltransferase 7500 8222 1
CDS rnhA ZP_02699198.1 SNSL317_A2612 ribonuclease HI 8219 8686 -1
CDS dnaQ ZP_02699199.1 SNSL317_A2613 DNA polymerase III, epsilon subunit 8741 9481 1
tRNA - - SNSL317_A2614 tRNA-Asp 9614 9692 1
CDS - ZP_02699202.1 SNSL317_A2615 ImpA-related N- family protein 10013 11068 -1
CDS - ZP_02699203.1 SNSL317_A2616 type VI secretion protein 11079 12074 -1
CDS vasA ZP_02699204.1 SNSL317_A2617 type VI secretion protein 12071 13954 -1
CDS - ZP_02699205.1 SNSL317_A2618 type VI secretion system lysozyme-related protein 13970 14464 -1
CDS - ZP_02699206.1 SNSL317_A2619 SciE protein 14461 15285 -1
CDS - ZP_02699207.1 SNSL317_A2620 putative cytoplasmic protein 15272 16162 -1
CDS clpV ZP_02699209.1 SNSL317_A2621 type VI secretion ATPase, ClpV1 family 16542 19205 1
CDS - ZP_02699211.2 SNSL317_A2622 conserved hypothetical protein 19291 19581 1
CDS - ZP_02699212.1 SNSL317_A2623 type VI secretion protein 19643 20185 1
CDS - ZP_02699213.1 SNSL317_A2624 type VI secretion protein, EvpB/family 20209 21717 1
CDS - ZP_02699214.2 SNSL317_A2625 conserved domain protein 22045 22170 1
CDS - ZP_02699215.2 SNSL317_A2626 putative cytoplasmic protein 22348 22629 1
CDS - ZP_02699216.1 SNSL317_A2627 hemolysin-coregulated protein 22883 23368 1
CDS - ZP_02699217.1 SNSL317_A2628 putative cytoplasmic protein 23672 24157 1
CDS - ZP_02699218.1 SNSL317_A2629 putative periplasmic protein 24193 24525 1
CDS - ZP_02699219.1 SNSL317_A2630 hemolysin-coregulated protein 24668 25153 1
CDS - ZP_02699220.2 SNSL317_A2631 type VI secretion lipoprotein, family 25265 25756 1
CDS - ZP_02699221.1 SNSL317_A2632 type VI secretion protein 25760 27103 1
CDS - ZP_02699222.1 SNSL317_A2633 SciP protein 27100 28404 1
CDS - ZP_02699223.1 SNSL317_A2634 conserved hypothetical protein 28409 29182 1
CDS - ZP_02699224.1 SNSL317_A2635 SciR protein 29460 29816 1
CDS icmF ZP_02699225.1 SNSL317_A2636 type VI secretion protein IcmF 29850 33719 1
CDS - ZP_02699226.2 SNSL317_A2637 conserved hypothetical protein 33734 34486 1
CDS - ZP_02699228.2 SNSL317_A2638 probable secreted protein 35089 35445 1
CDS - ZP_03080142.1 SNSL317_A2639 putative cytoplasmic protein 35454 35576 1
CDS - ZP_02699229.1 SNSL317_A2640 putative periplasmic protein 35603 35989 1
CDS - ZP_02699230.1 SNSL317_A2641 putative cytoplasmic protein 36016 36534 1
CDS - ZP_02699231.1 SNSL317_A2642 Rhs-family protein 36931 39120 1
CDS - ZP_02699232.1 SNSL317_A2643 conserved hypothetical protein 39144 39590 1
CDS - ZP_02699233.1 SNSL317_A2644 Rhs-family protein 39609 43757 1
CDS - ZP_02699234.2 SNSL317_A2645 YokK 43934 44293 1
CDS - ZP_02699235.2 SNSL317_A2646 conserved hypothetical protein 44641 44874 -1
CDS - ZP_02699236.1 SNSL317_A2647 Rhs-family protein 45091 47202 1
CDS - ZP_02699237.2 SNSL317_A2648 hypothetical protein 47372 47530 1
CDS - ZP_02699238.1 SNSL317_A2649 conserved hypothetical protein 47594 47851 -1
CDS - ZP_02699241.1 SNSL317_A2652 putative cytoplasmic protein 49272 49718 1
CDS - ZP_02699242.2 SNSL317_A2653 hypothetical protein 49903 50034 1
CDS - ZP_02699243.1 SNSL317_A2654 hypothetical protein 50104 50244 1
CDS - ZP_02699244.1 SNSL317_A2655 phosphotriesterase 50237 50647 1
CDS - ZP_02699245.1 SNSL317_A2656 conserved hypothetical protein 50700 50975 -1
CDS - ZP_03080145.1 SNSL317_A2657 hypothetical protein 51037 51156 1
CDS - ZP_02699247.2 SNSL317_A2659 hypothetical protein 51716 51874 1
CDS - ZP_02699252.1 SNSL317_A2662 saf-pilin pilus formation protein 54194 54691 1
CDS - ZP_02699253.2 SNSL317_A2663 gram-negative pili assembly chaperone domain protein 54939 55505 1
CDS - ZP_02699254.1 SNSL317_A2664 outer membrane usher protein SfmD 55529 58039 1
CDS - ZP_02699255.1 SNSL317_A2665 putative fimbrial structural subunit 58061 58531 1
CDS - ZP_02699256.1 SNSL317_A2666 polysaccharide deacetylase family protein 58939 59760 1
CDS - ZP_02699258.1 SNSL317_A2667 TnpA 60242 60373 1
CDS - ZP_02699259.2 SNSL317_A2668 LysR-family transcriptional regulator SinR 60576 61523 1
CDS - ZP_02699260.1 SNSL317_A2669 putative cytoplasmic protein 61643 61858 1
CDS - ZP_02699261.1 SNSL317_A2670 conserved hypothetical protein 61862 62581 -1
CDS - ZP_02699262.1 SNSL317_A2671 periplasmic protein 62912 63319 -1
CDS - ZP_02699264.1 SNSL317_A2672 hydrolase YafV 63690 64457 -1
CDS gmhA ZP_02699266.1 SNSL317_A2674 phosphoheptose isomerase 67250 67828 1
CDS - ZP_02699267.1 SNSL317_A2675 glutamine amidotransferase, class II 68041 68808 1
CDS - ZP_02699268.1 SNSL317_A2676 conserved hypothetical protein 68779 69519 -1
CDS dinB ZP_02699269.1 SNSL317_A2677 DNA polymerase IV 69769 70824 1
CDS - ZP_02699270.1 SNSL317_A2678 release factor H-coupled RctB family protein 71043 72182 1
CDS - ZP_02699271.1 SNSL317_A2679 putative peptide chain release factor H 72179 72793 1
CDS pepD ZP_02699272.1 SNSL317_A2680 aminoacyl-histidine dipeptidase 72949 74406 -1
CDS gpt ZP_02699273.1 SNSL317_A2681 xanthine phosphoribosyltransferase 74655 75113 1
CDS - ZP_02699274.1 SNSL317_A2682 esterase FrsA 75202 76446 1
CDS - ZP_02699275.1 SNSL317_A2683 sigma factor-binding protein crl 76504 76905 1
CDS - ZP_02699276.1 SNSL317_A2685 outer membrane pore protein E 76956 78008 -1
CDS - ZP_02699277.1 SNSL317_A2684 hypothetical protein 77971 78087 1
CDS proB ZP_02699278.1 SNSL317_A2686 glutamate 5-kinase 78291 79394 1
CDS proA ZP_02699279.1 SNSL317_A2687 glutamate-5-semialdehyde dehydrogenase 79406 80656 1
tRNA - - SNSL317_A2688 tRNA-Thr 80772 80847 1
CDS - ZP_02699280.1 SNSL317_A2690 transposase InsF for insertion sequence IS3A/B/C/D/E/fA 81110 81973 -1
CDS - ZP_02699281.2 SNSL317_A2692 conserved hypothetical protein 82811 83038 1
CDS - ZP_02699282.1 SNSL317_A2693 putative permease 83386 84618 1
CDS leuC ZP_02699283.1 SNSL317_A2694 3-isopropylmalate dehydratase, large subunit 84750 86171 1
CDS leuD ZP_02699284.1 SNSL317_A2695 3-isopropylmalate dehydratase, small subunit 86173 86799 1
CDS - ZP_02699285.1 SNSL317_A2696 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 86814 87692 1
CDS - ZP_02699286.1 SNSL317_A2697 haloacetate dehalogenase H-1 87692 88606 1
CDS - ZP_02699287.1 SNSL317_A2698 transcriptional regulator, LysR family 88640 89605 1
CDS - ZP_02699289.2 SNSL317_A2699 putative outer membrane protein 90717 90911 1
CDS - ZP_02699290.1 SNSL317_A2700 fimbrial chaperone protein 90958 91716 -1
CDS - ZP_02699291.1 SNSL317_A2701 putative fimbrial usher 91682 93007 -1
CDS - ZP_02699292.1 SNSL317_A2702 outer membrane fimbrial usher protein 93012 95573 -1
CDS - ZP_02699293.1 SNSL317_A2703 fimbrial chaperone protein 95557 96318 -1
CDS - ZP_02699294.1 SNSL317_A2704 fimbrial protein 96380 96916 -1
CDS - ZP_02699296.1 SNSL317_A2705 putative transmembrane regulator 97579 98313 1
CDS - ZP_02699299.1 SNSL317_A2707 cyclic diguanylate phosphodiesterase (EAL) domain protein 99112 100662 1
CDS - ZP_02699300.1 SNSL317_A2708 putative response regulator 100760 101503 1
CDS - ZP_02699301.1 SNSL317_A2709 putative inner membrane protein 101476 101964 1
CDS - ZP_02699302.1 SNSL317_A2710 attachment invasion locus protein 102366 102890 1
CDS - ZP_03080133.1 SNSL317_A2711 hypothetical protein 103281 103424 1