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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02700917.1 SNSL317_A4328 hypothetical protein 69 233 -1
CDS - ZP_02700918.1 SNSL317_A4327 putative 2-hydroxyacid dehydrogenase YcdW 232 1170 1
CDS - ZP_02700919.1 SNSL317_A4329 putative hydrolase 1255 1992 1
CDS - ZP_02700920.1 SNSL317_A4330 chaperone, TorD family 2016 2570 1
CDS - ZP_02700921.2 SNSL317_A4331 inner membrane protein YcdZ 2659 3153 1
CDS - ZP_02700922.1 SNSL317_A4332 curli production assembly/transport component CsgG 3192 4025 -1
CDS - ZP_02700923.1 SNSL317_A4333 curli production assembly/transport component CsgF 4052 4468 -1
CDS - ZP_02700924.1 SNSL317_A4334 curli production assembly/transport component CsgE 4495 4890 -1
CDS csgD ZP_02700925.1 SNSL317_A4335 transcriptional regulator CsgD 4895 5545 -1
CDS csgB ZP_02700930.1 SNSL317_A4336 minor curlin protein CsgB 6300 6755 1
CDS - ZP_02700931.1 SNSL317_A4337 major curlin subunit 6797 7252 1
CDS - ZP_02700932.2 SNSL317_A4338 curli production protein CsgC 7314 7640 1
CDS - ZP_02700933.1 SNSL317_A4339 putative periplasmic protein 7771 8091 1
CDS - ZP_02700934.1 SNSL317_A4340 protein YmdB 8178 8717 1
CDS - ZP_02700935.2 SNSL317_A4341 phopholipase D 8836 10140 1
CDS - ZP_02700936.1 SNSL317_A4342 glucans biosynthesis protein C 10157 11311 -1
CDS mdoG ZP_02700938.1 SNSL317_A4343 glucans biosynthesis protein G 11565 13118 1
CDS - ZP_02700939.1 SNSL317_A4344 glucans biosynthesis glucosyltransferase H 13111 15654 1
CDS - ZP_02700940.2 SNSL317_A4345 conserved domain protein 15752 15955 1
CDS - ZP_02700941.1 SNSL317_A4346 acidic protein MsyB 15956 16330 -1
CDS - ZP_02700942.1 SNSL317_A4347 multidrug resistance protein MdtG 16412 17626 -1
CDS - ZP_02700943.1 SNSL317_A4348 lipid A biosynthesis lauroyl acyltransferase 17781 18701 -1
CDS - ZP_02700944.1 SNSL317_A4349 protein YceA 18921 19973 1
CDS - ZP_02700945.1 SNSL317_A4350 protein YceI 20025 20600 -1
CDS - ZP_02700946.2 SNSL317_A4351 YceJ 20597 21175 -1
CDS - ZP_02700947.1 SNSL317_A4352 conserved hypothetical protein 21180 21383 1
CDS - ZP_02700948.2 SNSL317_A4353 conserved hypothetical protein 21432 21545 -1
CDS - ZP_02700949.1 SNSL317_A4354 N-methyl-l-tryptophan oxidase 21586 22704 -1
CDS - ZP_02700950.1 SNSL317_A4355 conserved hypothetical protein 22817 23071 -1
CDS - ZP_02700951.1 SNSL317_A4356 DNA damage-inducible protein I, inhibits UmuD processing 23361 23606 -1
CDS pyrC ZP_02700952.1 SNSL317_A4357 dihydroorotase, homodimeric type 23680 24726 -1
CDS - ZP_02700953.1 SNSL317_A4358 putative lipoprotein 24830 25390 -1
CDS grxB ZP_02700956.1 SNSL317_A4359 glutaredoxin, GrxB family 25515 26162 -1
CDS - ZP_02700957.1 SNSL317_A4360 multidrug resistance protein MdtH 26226 27434 -1
CDS - ZP_02700959.1 SNSL317_A4361 ribosomal-protein-alanine acetyltransferase 27671 28255 1
CDS - ZP_02700960.1 SNSL317_A4362 protein YceH 28291 28938 1
CDS - ZP_02700961.1 SNSL317_A4363 putative Virulence factor MviM homolog 28940 29863 1
CDS mviN ZP_02700962.1 SNSL317_A4364 integral membrane protein MviN 30128 31702 1
CDS - ZP_02700963.2 SNSL317_A4365 flagella synthesis protein FlgN 31784 32176 -1
CDS - ZP_02700964.1 SNSL317_A4366 negative regulator of flagellin synthesis 32211 32504 -1
CDS - ZP_02700966.1 SNSL317_A4367 flagella basal body P-ring formation protein FlgA 32596 33255 -1
CDS flgB ZP_02700968.1 SNSL317_A4368 flagellar basal-body rod protein FlgB 33412 33828 1
CDS flgC ZP_02700969.1 SNSL317_A4369 flagellar basal-body rod protein FlgC 33832 34236 1
CDS - ZP_02700970.1 SNSL317_A4370 basal-body rod modification protein FlgD 34248 34946 1
CDS - ZP_02700971.1 SNSL317_A4371 flagellar hook protein FlgE 34973 36184 1
CDS flgF ZP_02700972.1 SNSL317_A4372 flagellar basal-body rod protein FlgF 36205 36960 1
CDS flgG ZP_02700973.1 SNSL317_A4373 flagellar basal-body rod protein FlgG 36974 37756 1
CDS flgH ZP_03080178.1 SNSL317_A4374 flagellar L-ring protein FlgH 37843 38508 1
CDS flgI ZP_02700976.1 SNSL317_A4375 flagellar P-ring protein FlgI 38520 39617 1
CDS flgJ ZP_02700977.1 SNSL317_A4376 flagellar rod assembly protein/muramidase FlgJ 39617 40567 1
CDS flgK ZP_02700978.1 SNSL317_A4377 flagellar hook-associated protein FlgK 40632 42293 1
CDS flgL ZP_02700979.1 SNSL317_A4378 flagellar hook-associated protein 3 42308 43261 1
CDS - ZP_02700981.1 SNSL317_A4379 ribonuclease E 43517 46723 -1
CDS rluC ZP_02700984.1 SNSL317_A4380 ribosomal large subunit pseudouridine synthase C 47297 48256 1
CDS - ZP_02700985.1 SNSL317_A4381 putative inner membrane lipoprotein 48394 49155 1
CDS - ZP_02700986.1 SNSL317_A4382 conserved hypothetical protein 49359 49583 1
CDS maf ZP_02700987.1 SNSL317_A4384 septum formation protein Maf 49655 50239 -1
CDS - ZP_02700988.1 SNSL317_A4385 conserved hypothetical protein 50437 50958 1
CDS - ZP_03080176.1 SNSL317_A4387 hypothetical protein 50944 51348 -1
CDS plsX ZP_03080177.1 SNSL317_A4386 fatty acid/phospholipid synthesis protein PlsX 51317 52396 1
CDS fabH ZP_02700991.1 SNSL317_A4388 3-oxoacyl-[acyl-carrier-protein] synthase 3 52476 53429 1
CDS fabD ZP_02700992.1 SNSL317_A4389 malonyl CoA-acyl carrier protein transacylase 53445 54374 1
CDS fabG ZP_02700993.1 SNSL317_A4390 3-oxoacyl-[acyl-carrier-protein] reductase 54387 55121 1
CDS acpP ZP_02700994.2 SNSL317_A4391 acyl carrier protein 55277 55513 1
CDS fabF ZP_02700995.1 SNSL317_A4392 3-oxoacyl-[acyl-carrier-protein] synthase II 55599 56840 1
CDS pabC ZP_02700996.1 SNSL317_A4393 aminodeoxychorismate lyase 56964 57773 1
CDS - ZP_02700997.1 SNSL317_A4394 conserved hypothetical protein 57776 58798 1
CDS tmk ZP_02700998.1 SNSL317_A4395 thymidylate kinase 58788 59429 1
CDS - ZP_02700999.1 SNSL317_A4396 DNA polymerase III subunit delta' 59426 60430 1
CDS - ZP_02701000.1 SNSL317_A4397 deoxyribonuclease 60441 61238 1
CDS ptsG ZP_02701002.1 SNSL317_A4398 PTS system, glucose-specific IIBC component 61533 62966 1
CDS - ZP_02701003.1 SNSL317_A4399 FhuE receptor 63052 65226 -1
CDS - ZP_02701004.2 SNSL317_A4400 histidine triad nucleotide-binding protein 2 65550 65927 1
CDS - ZP_02701005.1 SNSL317_A4401 putative outer membrane lipoprotein 65930 66304 1
CDS - ZP_02701006.1 SNSL317_A4402 conserved hypothetical protein 66318 66956 1
CDS thiK ZP_02701007.1 SNSL317_A4403 thiamine kinase 66937 67761 1
CDS nagZ ZP_02701008.2 SNSL317_A4404 beta-N-acetylhexosaminidase 67772 68797 1
CDS - ZP_02701009.1 SNSL317_A4405 conserved hypothetical protein 68822 69364 1
CDS ndh ZP_02701010.1 SNSL317_A4406 NADH dehydrogenase 69618 70922 1
CDS - ZP_02701011.2 SNSL317_A4407 surface antigen domain protein 71101 71640 1
CDS - ZP_02701012.1 SNSL317_A4408 transcriptional regulator, TetR family 71714 72349 -1
CDS - ZP_02701014.1 SNSL317_A4409 protein YcfR 72591 72848 1
CDS - ZP_02701015.1 SNSL317_A4410 LysM domain/ErfK/YbiS/YcfS/YnhG family protein 72945 73910 -1
CDS mfd ZP_02701017.1 SNSL317_A4411 transcription-repair coupling factor 74058 77504 -1
CDS - ZP_02701018.1 SNSL317_A4412 hypothetical protein 77510 77668 1
CDS lolC ZP_02701019.1 SNSL317_A4413 lipoprotein-releasing system transmembrane protein LolC 77842 79041 1
CDS lolD ZP_02701020.1 SNSL317_A4414 lipoprotein releasing system, ATP-binding protein 79034 79735 1
CDS lolE ZP_02701021.1 SNSL317_A4415 lipoprotein releasing system, transmembrane protein LolE 79735 80979 1
CDS nagK ZP_02701022.1 SNSL317_A4416 N-acetylglucosamine kinase 81008 81919 1
CDS - ZP_02701023.1 SNSL317_A4417 NAD-dependent deacetylase 81938 82759 1
CDS - ZP_02701024.1 SNSL317_A4418 spermidine/putrescine-binding periplasmic protein 82841 83887 -1
CDS - ZP_02701025.1 SNSL317_A4419 spermidine/putrescine ABC transporter membrane component 83912 84691 -1
CDS - ZP_02701026.1 SNSL317_A4420 hypothetical protein 84794 84916 -1
CDS - ZP_02701027.1 SNSL317_A4421 protein SifA 85007 86017 -1
CDS - ZP_02701028.2 SNSL317_A4422 conserved hypothetical protein 86076 86240 -1
CDS - ZP_02701029.1 SNSL317_A4423 spermidine/putrescine transport system permease protein PotB 86346 87209 -1
CDS potA ZP_02701030.1 SNSL317_A4424 spermidine/putrescine ABC transporter, ATP-binding protein 87193 88329 -1
CDS pepT ZP_02701031.1 SNSL317_A4425 peptidase T 88580 89809 1
CDS - ZP_02701032.1 SNSL317_A4426 tetratricopeptide repeat domain protein 89813 91147 1
CDS - ZP_02701033.1 SNSL317_A4427 cupin family protein 91187 92308 -1