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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA rrf - SNSL317_A2357 5S ribosomal RNA 92 207 1
CDS mobB ZP_02701157.1 SNSL317_A2358 molybdopterin-guanine dinucleotide biosynthesis protein B 472 1002 -1
CDS mobA ZP_02701158.1 SNSL317_A2359 molybdopterin-guanine dinucleotide biosynthesis protein A 984 1568 -1
CDS - ZP_02701160.1 SNSL317_A2360 conserved hypothetical protein 1638 1907 1
CDS - ZP_02701161.1 SNSL317_A2361 protein RdoA 1984 2970 1
CDS - ZP_02701162.1 SNSL317_A2362 thiol:disulfide interchange protein DsbA 2987 3610 1
CDS - ZP_02701163.1 SNSL317_A2363 1-acyl-sn-glycerol-3-phosphate acyltransferase 3623 4531 -1
CDS - ZP_02701164.1 SNSL317_A2364 hypothetical protein 4729 4860 -1
CDS polA ZP_02701165.1 SNSL317_A2365 DNA polymerase I 4919 7705 1
CDS - ZP_02701167.1 SNSL317_A2367 putative GTP-binding protein EngB 8040 8672 -1
CDS - ZP_02701169.1 SNSL317_A2369 conserved hypothetical protein 9255 9770 1
CDS hemN ZP_02701170.1 SNSL317_A2370 oxygen-independent coproporphyrinogen III oxidase 9959 11332 1
CDS ntrC ZP_02701172.1 SNSL317_A2371 nitrogen regulation protein NR 11645 13054 -1
CDS glnL ZP_02701173.1 SNSL317_A2372 nitrogen regulation protein NR 13063 14112 -1
CDS glnA ZP_02701174.1 SNSL317_A2373 glutamine synthetase 14387 15796 -1
CDS typA ZP_02701176.1 SNSL317_A2374 GTP-binding protein TypA 16172 17995 1
CDS - ZP_02701177.1 SNSL317_A2375 hydrolase, Cof family 18050 18784 -1
CDS - ZP_02701178.1 SNSL317_A2376 putative inner membrane protein 18769 19647 -1
CDS - ZP_02701179.1 SNSL317_A2377 coproporphyrinogen III oxidase 19644 20885 -1
CDS - ZP_02701180.1 SNSL317_A2378 putative membrane-associated metal-dependent hydrolase 20887 21762 -1
CDS - ZP_02701181.1 SNSL317_A2379 putative periplasmic protein 21755 22741 -1
CDS - ZP_02701182.1 SNSL317_A2380 conserved hypothetical protein 22793 23641 -1
CDS - ZP_02701183.2 SNSL317_A2381 porin OmpL 23798 24490 -1
CDS - ZP_02701184.1 SNSL317_A2382 sugar (Glycoside-Pentoside-Hexuronide) transporter 24558 25976 -1
CDS - ZP_02701185.1 SNSL317_A2383 inner membrane symporter YihP 26022 27404 -1
CDS - ZP_02701186.1 SNSL317_A2384 alpha-glucosidase YihQ 27450 29486 -1
CDS - ZP_02701187.1 SNSL317_A2385 putative domain of unknown function 29610 30485 -1
CDS - ZP_02701188.2 SNSL317_A2386 aldose-1-epimerase family protein 30574 31461 -1
CDS - ZP_02701189.1 SNSL317_A2387 N-acylglucosamine 2-epimerase 31548 32789 -1
CDS - ZP_02701190.1 SNSL317_A2388 deoxyribose-phosphate aldolase 32805 33683 -1
CDS - ZP_02701191.1 SNSL317_A2389 3-hydroxyisobutyrate dehydrogenase family protein 33706 34602 -1
CDS - ZP_02701192.1 SNSL317_A2390 hypothetical protein 34590 34709 -1
CDS - ZP_02701193.1 SNSL317_A2391 kinase, PfkB family 34767 35663 1
CDS - ZP_02701194.1 SNSL317_A2392 glycerol-3-phosphate regulon repressor 35697 36500 1
CDS yihX ZP_02701195.1 SNSL317_A2393 phosphatase YihX 36691 37290 1
CDS rbn ZP_02701196.1 SNSL317_A2394 tRNA-processing ribonuclease BN 37284 38156 1
CDS dtd ZP_02701197.1 SNSL317_A2395 D-tyrosyl-tRNA(Tyr) deacylase 38153 38590 1
CDS - ZP_02701198.1 SNSL317_A2396 acetyltransferase, gnat family 38635 39576 1
CDS - ZP_02701199.2 SNSL317_A2397 Sea41 39591 40019 -1
CDS - ZP_02701200.1 SNSL317_A2398 Sea40 40034 40345 -1
CDS - ZP_02701201.1 SNSL317_A2399 acetyl esterase 40431 41360 -1
CDS - ZP_02701202.1 SNSL317_A2401 conserved hypothetical protein 41554 41778 -1
CDS - ZP_03080187.1 SNSL317_A2400 conserved hypothetical protein 41758 41889 1
CDS - ZP_02701203.1 SNSL317_A2402 transcriptional regulator, XRE family 41890 42180 1
CDS fdhE ZP_02701204.1 SNSL317_A2403 formate dehydrogenase accessory protein FdhE 42227 43156 -1
CDS fdoI ZP_02701205.1 SNSL317_A2404 formate dehydrogenase-O, gamma subunit 43153 43788 -1
CDS fdoH ZP_02701206.1 SNSL317_A2405 formate dehydrogenase-O, iron-sulfur subunit 43785 44687 -1
CDS fdhD ZP_03080185.1 SNSL317_A2408 formate dehydrogenase family accessory protein FdhD 47945 48781 1
CDS - ZP_02701209.1 SNSL317_A2409 putative inner membrane lipoprotein 49049 50080 -1
CDS - ZP_03080186.1 SNSL317_A2410 hypothetical protein 50128 50262 1
CDS - ZP_02701210.1 SNSL317_A2411 conserved hypothetical protein 50263 51363 1
CDS - ZP_03080189.1 SNSL317_A2412 hypothetical protein 51360 51488 1
CDS - ZP_02701211.1 SNSL317_A2413 branched-chain amino acid transport 51719 52042 -1
CDS - ZP_02701212.1 SNSL317_A2414 AzlC family protein 52042 52701 -1
CDS - ZP_02701213.1 SNSL317_A2415 transcriptional regulator, XRE family 52802 53350 1
CDS rhaU ZP_02701215.1 SNSL317_A2416 L-rhamnose 1-epimerase 53439 53753 -1
CDS fucO ZP_02701216.1 SNSL317_A2417 lactaldehyde reductase 53750 54898 -1
CDS rhaD ZP_02701217.1 SNSL317_A2418 rhamnulose-1-phosphate aldolase 55025 55852 -1
CDS rhaA ZP_02701218.1 SNSL317_A2419 L-rhamnose isomerase 55995 57254 -1
CDS rhaB ZP_02701219.1 SNSL317_A2420 rhamnulokinase 57251 58720 -1
CDS - ZP_02701222.1 SNSL317_A2421 HTH-type transcriptional activator RhaS 59008 59844 1
CDS - ZP_02701224.1 SNSL317_A2422 HTH-type transcriptional activator RhaR 59997 60845 1
CDS - ZP_02701225.1 SNSL317_A2423 L-rhamnose-proton symporter 60842 61876 -1
CDS - ZP_02701226.2 SNSL317_A2424 conserved hypothetical protein 61880 62011 1
CDS - ZP_02701227.2 SNSL317_A2425 hypothetical protein 62354 62470 1
CDS - ZP_02701228.1 SNSL317_A2426 oligogalacturonate-specific porin 62507 63178 1
CDS - ZP_02701229.1 SNSL317_A2427 trap dicarboxylate transporter, dctm subunit 63336 64643 -1
CDS - ZP_02701230.1 SNSL317_A2428 trap dicarboxylate transporter, dctq subunit 64636 65151 -1
CDS - ZP_02701231.1 SNSL317_A2429 trap dicarboxylate transporter, dctp subunit 65170 66153 -1
CDS sodA ZP_02701233.1 SNSL317_A2430 superoxide dismutase 66482 67102 1
CDS - ZP_02701234.1 SNSL317_A2431 mosc domain containing protein 67172 67861 1
CDS - ZP_02701235.1 SNSL317_A2432 conserved hypothetical protein 67873 68268 1
CDS - ZP_02701236.1 SNSL317_A2433 sensor protein CpxA 68319 69692 -1
CDS cpxR ZP_02701237.1 SNSL317_A2434 transcriptional regulatory protein CpxR 69689 70387 -1
CDS - ZP_02701238.1 SNSL317_A2435 periplasmic repressor 70538 71038 1
CDS fieF ZP_02701239.1 SNSL317_A2436 cation-efflux pump FieF 71186 72088 1
CDS pfkA ZP_02701240.1 SNSL317_A2437 6-phosphofructokinase 72273 73235 1
CDS - ZP_02701243.1 SNSL317_A2438 sulfate-binding protein 73439 74428 1
CDS - ZP_02701245.1 SNSL317_A2440 sugar (Glycoside-Pentoside-Hexuronide) transporter 75547 76881 1
CDS - ZP_02701246.1 SNSL317_A2441 fructokinase 76892 77851 1
CDS - ZP_02701247.1 SNSL317_A2442 ADP-ribosylglycohydrolase superfamily protein 77861 78901 1
CDS - ZP_02701248.2 SNSL317_A2443 putative regulatory protein 78964 79686 1
CDS - ZP_02701249.1 SNSL317_A2444 sodium/sulphate symporter 79784 79954 1
CDS - ZP_02701251.1 SNSL317_A2446 polyketide synthesis domain protein 80191 80541 -1
CDS - ZP_02701252.2 SNSL317_A2447 carbohydrate kinase, FGGY family 80555 82105 -1
CDS - ZP_02701253.1 SNSL317_A2448 putative sugar-binding domain 82234 83193 -1
CDS - ZP_02701254.1 SNSL317_A2450 hypothetical protein 83320 83463 -1
CDS - ZP_02701255.1 SNSL317_A2449 putative ABC transporter ATP-binding protein ego 83449 84984 1
CDS - ZP_02701256.1 SNSL317_A2451 inner membrane ABC transporter permease protein YdeY 84978 86021 1
CDS - ZP_02701257.1 SNSL317_A2452 inner membrane ABC transporter permease protein YdeZ 86021 87019 1
CDS - ZP_02701258.2 SNSL317_A2453 conserved hypothetical protein 87027 88070 1
CDS - ZP_02701259.1 SNSL317_A2454 deoxyribose-phosphate aldolase family protein 88099 88974 1
CDS - ZP_02701260.2 SNSL317_A2455 LsrG protein 89018 89347 1
CDS - ZP_02701261.1 SNSL317_A2456 ribulose-phosphate 3-epimerase 89357 90121 1
CDS tpiA ZP_02701262.1 SNSL317_A2457 triosephosphate isomerase 90213 90980 -1
CDS - ZP_02701263.1 SNSL317_A2458 conserved hypothetical protein 91093 91689 -1
CDS - ZP_02701264.1 SNSL317_A2459 conserved hypothetical protein 91790 92218 1
CDS - ZP_02701265.1 SNSL317_A2460 ferredoxin--NADP reductase 92325 93071 -1
CDS glpX1 ZP_02701266.1 SNSL317_A2461 fructose-1,6-bisphosphatase, class II 93168 94178 -1
CDS glpK ZP_02701267.1 SNSL317_A2462 glycerol kinase 94290 95798 -1