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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02701322.1 SNSL317_A1399 conserved hypothetical protein 1128 1364 1
CDS - ZP_02701323.1 SNSL317_A1400 side tail fiber protein 1420 3858 1
CDS - ZP_02701324.1 SNSL317_A1401 tail fiber assembly like-protein 3858 4439 1
CDS - ZP_02701325.1 SNSL317_A1402 secreted effector protein 4915 5883 1
CDS - ZP_02701327.1 SNSL317_A1405 conserved hypothetical protein 6531 7157 -1
CDS - ZP_03080191.1 SNSL317_A1404 conserved hypothetical protein 7139 7288 1
CDS - ZP_03080192.1 SNSL317_A1406 gifsy-2 prophage protein 7510 8196 -1
CDS - ZP_02701331.1 SNSL317_A1407 gifsy-2 prophage MsgA 8467 8658 -1
CDS pepN ZP_02701332.1 SNSL317_A1408 aminopeptidase N 9085 11697 1
CDS pyrD ZP_02701333.1 SNSL317_A1409 dihydroorotate oxidase 11905 12915 1
CDS - ZP_02701335.1 SNSL317_A1410 conserved hypothetical protein 13081 13623 1
CDS - ZP_02701336.1 SNSL317_A1411 MOSC domain protein 13620 14729 -1
CDS - ZP_02701337.1 SNSL317_A1412 putative RNA methylase family UPF0020 14828 16936 1
CDS - ZP_02701338.1 SNSL317_A1413 ABC transporter ATP-binding protein uup 16949 18856 1
CDS - ZP_02701339.2 SNSL317_A1414 paraquat-inducible protein A 18871 20127 1
CDS - ZP_02701340.1 SNSL317_A1415 paraquat-inducible protein B 20132 21772 1
CDS - ZP_02701341.1 SNSL317_A1416 putative lipoprotein 21769 22332 1
CDS - ZP_02701342.2 SNSL317_A1417 hypothetical protein 22287 22424 -1
CDS fabA ZP_02701344.1 SNSL317_A1418 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 22855 23373 -1
CDS - ZP_02701345.1 SNSL317_A1419 Lon protease (S16) C-terminal proteolytic domain 23442 25202 -1
CDS - ZP_02701346.1 SNSL317_A1420 protein YcbG 25388 25840 1
CDS ompA ZP_02701347.2 SNSL317_A1421 outer membrane protein A 25912 26988 -1
CDS - ZP_02701348.1 SNSL317_A1422 cell division inhibitor 27321 27830 -1
CDS - ZP_02701350.1 SNSL317_A1423 TfoX family protein 28047 28652 1
CDS yccS ZP_02701351.1 SNSL317_A1424 hypothetical membrane protein 28639 30792 -1
CDS - ZP_02701352.1 SNSL317_A1425 inner membrane protein YccF 30811 31257 -1
CDS - ZP_02701353.1 SNSL317_A1426 helicase IV 31381 33435 1
CDS mgsA ZP_02701354.1 SNSL317_A1427 methylglyoxal synthase 33471 33929 -1
CDS - ZP_02701355.1 SNSL317_A1428 conserved hypothetical protein 34025 34687 -1
CDS - ZP_02701357.1 SNSL317_A1430 hemimethylated DNA-binding protein 35319 35636 -1
CDS - ZP_02701358.1 SNSL317_A1431 protein YccW 35694 36905 -1
CDS - ZP_02701360.1 SNSL317_A1432 conserved hypothetical protein 37120 37668 1
CDS - ZP_02701361.2 SNSL317_A1433 bacterial regulatory protein 37685 38473 1
CDS - ZP_02701362.1 SNSL317_A1434 acylphosphatase 38522 38803 1
CDS - ZP_02701363.1 SNSL317_A1435 sulfurtransferase TusE 38800 39129 -1
CDS - ZP_02701364.1 SNSL317_A1436 inner membrane protein YccA 39216 39875 -1
tRNA - - SNSL317_A1438 tRNA-Ser 40269 40358 1
CDS - ZP_02701365.1 SNSL317_A1439 PipA 40514 41194 -1
CDS - ZP_02701366.1 SNSL317_A1440 PipB 41416 42291 -1
CDS - ZP_02701368.1 SNSL317_A1441 chaperone protein SigE 42839 43180 -1
CDS - ZP_02701369.1 SNSL317_A1442 inositol phosphate phosphatase SopB 43197 44882 -1
CDS - ZP_02701370.1 SNSL317_A1443 conserved hypothetical protein 45214 45384 1
CDS - ZP_02701373.1 SNSL317_A1444 peptidase family C69 45604 47166 -1
CDS - ZP_02701374.1 SNSL317_A1445 heavy metal sensor kinase subfamily 47246 48610 -1
CDS - ZP_02701375.1 SNSL317_A1446 transcriptional activator protein IrlR 48603 49283 -1
CDS uraH ZP_02701376.1 SNSL317_A1447 hydroxyisourate hydrolase 49419 49829 1
CDS hpaC ZP_02701379.1 SNSL317_A1448 4-hydroxyphenylacetate 3-monooxygenase, reductase component 50162 50674 -1
CDS hpaB ZP_02701380.1 SNSL317_A1449 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 50692 52254 -1
CDS hpaR ZP_02701381.1 SNSL317_A1450 homoprotocatechuate degradation operon regulator, HpaR 52472 52912 -1
CDS - ZP_02701382.1 SNSL317_A1451 4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase 53187 54476 1
CDS hpaE ZP_02701383.1 SNSL317_A1452 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 54473 55939 1
CDS hpaD ZP_02701384.1 SNSL317_A1453 3,4-dihydroxyphenylacetate 2,3-dioxygenase 55941 56792 1
CDS hpcD ZP_02701385.1 SNSL317_A1454 5-carboxymethyl-2-hydroxymuconate delta isomerase 56802 57182 1
CDS hpaH ZP_02701386.1 SNSL317_A1455 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 57326 58129 1
CDS hpaI ZP_02701387.1 SNSL317_A1456 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 58140 58931 1
CDS hpaX ZP_02701388.1 SNSL317_A1457 4-hydroxyphenylacetate permease 59003 60379 1
CDS hpaA ZP_02701389.1 SNSL317_A1458 4-hydroxyphenylacetate catabolism regulatory protein HpaA 60389 61285 1
CDS - ZP_02701390.1 SNSL317_A1459 putative periplasmic protein 61299 62237 1
CDS - ZP_02701394.1 SNSL317_A1460 conserved hypothetical protein 63455 63610 1
CDS - ZP_02701395.1 SNSL317_A1461 chaperone modulatory protein CbpM 63661 63966 -1
CDS - ZP_02701396.1 SNSL317_A1462 curved DNA-binding protein 63966 64886 -1
CDS - ZP_02701398.1 SNSL317_A1463 membrane protein, suppressor for copper-sensitivity A 65121 65483 1
CDS - ZP_02701400.1 SNSL317_A1464 membrane protein, suppressor for copper-sensitivity B 65532 67418 1
CDS - ZP_02701401.1 SNSL317_A1465 suppressor for copper-sensitivity C 67415 68038 1
CDS - ZP_02701402.1 SNSL317_A1466 suppressor for copper-sensitivity D 68028 68534 1
CDS - ZP_02701403.1 SNSL317_A1467 glucose-1-phosphatase 68667 69908 1
CDS - ZP_02701404.1 SNSL317_A1468 putative cytoplasmic protein 69942 70169 -1
CDS wrbA ZP_02701405.1 SNSL317_A1469 NAD(P)H:quinone oxidoreductase, type IV 70190 70786 -1
CDS - ZP_03080190.1 SNSL317_A1470 conserved hypothetical protein 71184 71378 1
CDS - ZP_02701410.1 SNSL317_A1471 HTH-type transcriptional regulator RutR 71475 72113 1
CDS - ZP_02701411.1 SNSL317_A1472 putative secreted protein 72110 72505 -1
CDS - ZP_02701412.1 SNSL317_A1473 bifunctional protein PutA 72564 76526 -1
CDS putP ZP_02701414.2 SNSL317_A1474 sodium/proline symporter 76944 78455 1
CDS - ZP_02701419.1 SNSL317_A1476 transcriptional regulator, RpiR family 80242 81123 -1
CDS - ZP_02701421.1 SNSL317_A1477 sodium-glucose/galactose cotransporter 81409 82905 -1
CDS - ZP_02701424.1 SNSL317_A1478 bifunctional enzyme NanE/nanK 83242 83922 -1
CDS - ZP_02701427.2 SNSL317_A1479 kelch domain-containing protein YjhT 84428 85588 1
CDS - ZP_02701428.1 SNSL317_A1480 oligogalacturonate-specific porin 85634 86326 1
CDS - ZP_02701429.1 SNSL317_A1481 putative metabolite transport protein YjhB 86609 87889 1
CDS - ZP_02701430.1 SNSL317_A1482 putative oxidoreductase YjhC 87903 89006 1