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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS trkH ZP_02701434.1 SNSL317_A2514 Trk system potassium uptake protein TrkH 576 2027 -1
CDS - ZP_02701435.1 SNSL317_A2515 conserved hypothetical protein 2066 2680 -1
CDS pepQ ZP_02701436.1 SNSL317_A2516 Xaa-Pro dipeptidase 2680 4011 -1
CDS fadB ZP_02701437.1 SNSL317_A2517 fatty oxidation complex, alpha subunit FadB 4201 6390 1
CDS fadA ZP_02701438.1 SNSL317_A2518 acetyl-CoA C-acyltransferase FadA 6400 7563 1
CDS - ZP_02701439.1 SNSL317_A2519 arylsulfotransferase 7760 9583 -1
CDS - ZP_02701440.1 SNSL317_A2520 oxidoreductase domain protein 9837 10538 -1
CDS ubiD ZP_02701441.1 SNSL317_A2521 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10624 12102 -1
CDS rfaH ZP_02701443.1 SNSL317_A2522 transcriptional activator RfaH 12288 12776 1
CDS - ZP_02701444.1 SNSL317_A2523 deoxyribonuclease TatD 12784 13578 -1
CDS tatC ZP_02701445.1 SNSL317_A2524 twin arginine-targeting protein translocase TatC 13608 14387 -1
CDS - ZP_02701446.1 SNSL317_A2525 Sec-independent protein translocase protein TatB 14390 14938 -1
CDS - ZP_02701447.1 SNSL317_A2526 Sec-independent protein translocase protein TatA 14942 15196 -1
CDS ubiB ZP_02701448.1 SNSL317_A2527 2-polyprenylphenol 6-hydroxylase 15402 17042 -1
CDS - ZP_02701449.1 SNSL317_A2528 conserved hypothetical protein 17039 17644 -1
CDS - ZP_02701450.1 SNSL317_A2529 ubiquinone/menaquinone biosynthesis methyltransferase UbiE 17654 18409 -1
CDS - ZP_02701451.1 SNSL317_A2530 DNA recombination protein RmuC 18505 19935 -1
CDS udp ZP_02701452.1 SNSL317_A2531 uridine phosphorylase 20075 20836 -1
CDS - ZP_02701453.2 SNSL317_A2532 dienelactone hydrolase 21032 21907 1
CDS - ZP_02701454.1 SNSL317_A2533 chondroitin sulfate/heparin utilization regulation protein 21987 23282 -1
CDS - ZP_03080193.1 SNSL317_A2534 hypothetical protein 23339 23485 -1
CDS - ZP_03080194.1 SNSL317_A2535 hypothetical protein 23482 23610 -1
CDS metE ZP_02701456.1 SNSL317_A2536 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 23674 25938 -1
CDS metR ZP_02701457.1 SNSL317_A2537 transcriptional regulator MetR 26187 27140 1
CDS pldB ZP_02701460.1 SNSL317_A2539 lysophospholipase L2 28824 29840 -1
CDS rhtB ZP_02701461.1 SNSL317_A2540 homoserine/homoserine lactone efflux protein 29951 30571 1
CDS rhtC ZP_02701462.1 SNSL317_A2541 threonine efflux protein 30611 31231 -1
CDS recQ ZP_02701463.2 SNSL317_A2542 ATP-dependent DNA helicase RecQ 31295 33124 -1
CDS - ZP_02701464.1 SNSL317_A2543 phospholipase A1 33208 34077 -1
CDS - ZP_02701465.1 SNSL317_A2544 f161 34242 34709 1
CDS rarD ZP_02701466.1 SNSL317_A2545 RarD protein 34753 35640 1
CDS - ZP_02701467.1 SNSL317_A2546 conserved hypothetical protein 35680 35976 -1
CDS - ZP_02701468.1 SNSL317_A2547 conserved hypothetical protein 36151 36531 1
CDS corA ZP_02701469.1 SNSL317_A2548 magnesium and cobalt transport protein CorA 36579 37529 -1
CDS uvrD ZP_02701471.1 SNSL317_A2549 DNA helicase II 38001 40163 -1
CDS - ZP_02701472.1 SNSL317_A2550 HAD-superfamily hydrolase 40299 41015 -1
CDS xerC ZP_02701473.1 SNSL317_A2551 tyrosine recombinase XerC 41015 41917 -1
CDS - ZP_02701474.1 SNSL317_A2552 conserved hypothetical protein 41914 42621 -1
CDS dapF ZP_02701475.1 SNSL317_A2553 diaminopimelate epimerase 42618 43442 -1
CDS - ZP_02701476.1 SNSL317_A2554 putative lipoprotein 43479 43682 -1
CDS - ZP_02701481.2 SNSL317_A2556 putative inner membrane protein 44378 44767 1
CDS cyaY ZP_02701482.1 SNSL317_A2557 iron donor protein CyaY 44837 45157 1
CDS cyaA ZP_02701483.1 SNSL317_A2558 adenylate cyclase, class I 45235 47781 -1
CDS hemC ZP_02701485.1 SNSL317_A2559 porphobilinogen deaminase 48137 49099 1
CDS hemD ZP_02701486.1 SNSL317_A2560 uroporphyrinogen-III synthase 49096 49836 1
CDS - ZP_02701487.1 SNSL317_A2561 putative uroporphyrin-III C-methyltransferase 49858 51027 1
CDS hemY ZP_02701488.1 SNSL317_A2562 HemY protein 51027 52226 1
CDS - ZP_02701490.2 SNSL317_A2564 hypothetical protein 52615 52743 -1
tRNA - - SNSL317_A2565 tRNA-Pro 52807 52885 -1
tRNA - - SNSL317_A2566 tRNA-Leu 52927 53013 -1
tRNA - - SNSL317_A2567 tRNA-His 53033 53110 -1
tRNA - - SNSL317_A2568 tRNA-Arg 53164 53240 -1
CDS - ZP_02701491.1 SNSL317_A2569 amino acid permease family protein 53343 54728 -1
CDS - ZP_02701492.1 SNSL317_A2570 glycosyl transferase, WecB/TagA/CpsF family 54935 55675 -1
CDS wzyE ZP_02701493.1 SNSL317_A2571 ECA biosynthesis protein WzyE 55672 57030 -1
CDS wecF ZP_02701494.1 SNSL317_A2572 TDP-Fuc4NAc:lipid II Fuc4Nac transferase 57027 58106 -1
CDS - ZP_02701495.1 SNSL317_A2573 polysaccharide biosynthesis protein 58103 59353 -1
CDS wecE ZP_02701496.1 SNSL317_A2574 TDP-4-keto-6-deoxy-D-glucose transaminase 59355 60485 -1
CDS wecD ZP_02701497.1 SNSL317_A2575 TDP-D-fucosamine acetyltransferase 60490 61167 -1
CDS rfbA ZP_02701498.1 SNSL317_A2576 glucose-1-phosphate thymidylyltransferase 61145 62026 -1
CDS rfbB2 ZP_02701499.1 SNSL317_A2577 dTDP-glucose 4,6-dehydratase 62059 63126 -1
CDS wecC ZP_02701500.1 SNSL317_A2578 UDP-N-acetyl-D-mannosamine dehydrogenase 63126 64388 -1
CDS - ZP_02701501.2 SNSL317_A2579 UDP-N-acetylglucosamine 2-epimerase 64385 65515 -1
CDS - ZP_02701502.1 SNSL317_A2580 lipopolysaccharide biosynthesis protein WzzE 65571 66617 -1
CDS wecA ZP_02701503.1 SNSL317_A2581 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 66629 67732 -1
CDS rho ZP_02701504.1 SNSL317_A2582 transcription termination factor Rho 67962 69221 -1
CDS trx ZP_02701505.1 SNSL317_A2583 thioredoxin 69640 69969 -1
CDS rhlB ZP_02701506.1 SNSL317_A2584 ATP-dependent RNA helicase RhlB 70113 71378 1
CDS gppA ZP_02701507.1 SNSL317_A2585 guanosine-5'-triphosphate,3'-diphosphate diphosphatase 71497 72978 1
CDS rep ZP_02701508.1 SNSL317_A2586 ATP-dependent DNA helicase Rep 73018 75042 -1
CDS ppiC ZP_02701511.1 SNSL317_A2587 peptidyl-prolyl cis-trans isomerase C 75580 75861 1
CDS ilvC ZP_02701512.1 SNSL317_A2588 ketol-acid reductoisomerase 75899 77374 -1
CDS - ZP_02701513.1 SNSL317_A2589 HTH-type transcriptional regulator IlvY 77538 78425 1
CDS - ZP_02701514.1 SNSL317_A2590 transcriptional regulator, XRE family 78428 78769 -1
CDS - ZP_02701515.1 SNSL317_A2591 conserved hypothetical protein 78766 79128 -1
CDS ilvA ZP_02701516.2 SNSL317_A2592 threonine ammonia-lyase, biosynthetic 79366 80910 -1
CDS ilvD ZP_02701517.1 SNSL317_A2593 dihydroxy-acid dehydratase 80913 82763 -1
CDS ilvE ZP_02701518.1 SNSL317_A2594 branched-chain amino acid aminotransferase 82923 83852 -1
CDS ilvM ZP_02701519.1 SNSL317_A2595 acetolactate synthase, isozyme II, small subunit 83870 84133 -1
CDS ilvG ZP_02701520.1 SNSL317_A2596 acetolactate synthase, large subunit, isozyme II 84130 85776 -1
CDS - ZP_02701521.1 SNSL317_A2597 Mg chelatase homolog 86366 87886 1
CDS - ZP_02701522.1 SNSL317_A2598 conserved hypothetical protein 87911 88249 -1
CDS hdfR ZP_02701523.1 SNSL317_A2599 transcriptional regulator HdfR 88368 89204 1
tRNA - - SNSL317_A2600 tRNA-Trp 89305 89382 -1
tRNA - - SNSL317_A2601 tRNA-Asp 89389 89467 -1
rRNA rrf - SNSL317_A2602 5S ribosomal RNA 89521 89634 -1