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Salmonella enterica subsp. enterica serovar Newport str. SL317, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02701524.1 SNSL317_A0001 tetratricopeptide TPR_2 repeat protein 147 935 -1
CDS pal ZP_02701525.1 SNSL317_A0002 peptidoglycan-associated lipoprotein 945 1469 -1
CDS tolB ZP_02701526.1 SNSL317_A0003 tol-Pal system beta propeller repeat protein TolB 1504 2799 -1
CDS tolA ZP_02701527.1 SNSL317_A0004 protein TolA 2920 4098 -1
CDS tolR ZP_02701528.1 SNSL317_A0005 protein TolR 4163 4591 -1
CDS tolQ ZP_02701529.2 SNSL317_A0006 protein TolQ 4595 5287 -1
CDS - ZP_02701530.1 SNSL317_A0007 acyl-CoA thioester hydrolase YbgC 5284 5688 -1
CDS - ZP_02701531.1 SNSL317_A0008 cyd operon protein YbgE 5917 6210 -1
CDS - ZP_02701532.1 SNSL317_A0009 cyd operon protein YbgT 6210 6323 -1
CDS cydB1 ZP_02701533.1 SNSL317_A0010 cytochrome d ubiquinol oxidase, subunit II 6338 7477 -1
CDS cydA ZP_02701534.1 SNSL317_A0011 cytochrome d ubiquinol oxidase, subunit I 7493 9061 -1
CDS - ZP_02701536.1 SNSL317_A0012 hypothetical protein 9291 9404 1
CDS - ZP_02701539.1 SNSL317_A0013 hypothetical protein 10278 10403 -1
CDS - ZP_02701540.1 SNSL317_A0014 hypothetical protein 10490 10615 -1
CDS - ZP_02701541.1 SNSL317_A0015 succinyl-CoA ligase [ADP-forming] subunit alpha 10644 11513 -1
CDS sucC ZP_02701542.1 SNSL317_A0016 succinate-CoA ligase, beta subunit 11513 12679 -1
CDS sucB ZP_02701544.1 SNSL317_A0017 dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 12821 14029 -1
CDS sucA ZP_02701545.1 SNSL317_A0018 oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14044 16845 -1
CDS - ZP_02701546.2 SNSL317_A0019 succinate dehydrogenase iron-sulfur subunit 17369 18088 -1
CDS sdhA ZP_02701547.1 SNSL317_A0020 succinate dehydrogenase, flavoprotein subunit 18102 19868 -1
CDS sdhD ZP_02701548.1 SNSL317_A0021 succinate dehydrogenase, hydrophobic membrane anchor protein 19868 20215 -1
CDS sdhC ZP_02701549.1 SNSL317_A0022 succinate dehydrogenase, cytochrome b556 subunit 20209 20613 -1
CDS gltA ZP_02701551.1 SNSL317_A0023 citrate (Si)-synthase 21353 22636 1
CDS - ZP_02701552.1 SNSL317_A0024 protein AbrB 22773 23819 1
CDS - ZP_02701553.1 SNSL317_A0025 endonuclease VIII 23874 24665 -1
CDS - ZP_02701554.1 SNSL317_A0026 putative cytoplasmic protein 24714 24851 -1
CDS - ZP_02701555.1 SNSL317_A0027 putative glycosyl transferase 24919 26868 -1
CDS - ZP_02701556.2 SNSL317_A0028 putative glycosyltransferase 26872 27639 -1
CDS - ZP_02701557.1 SNSL317_A0029 putative glycosyltransferase, cell wall biogenesis 27898 29676 -1
CDS - ZP_02701558.1 SNSL317_A0030 ABC transporter domain protein 29770 30480 -1
CDS - ZP_02701559.1 SNSL317_A0031 O-antigen export system, permease protein 30484 31254 -1
CDS - ZP_02701560.1 SNSL317_A0032 galactosyltransferase 31383 32516 -1
CDS - ZP_02701561.1 SNSL317_A0033 putative glycosyl transferase 32529 33422 -1
CDS glf ZP_02701562.1 SNSL317_A0034 UDP-galactopyranose mutase 33422 34573 -1
CDS - ZP_02701564.2 SNSL317_A0035 conserved hypothetical protein 34859 35557 -1
CDS - ZP_02701565.2 SNSL317_A0036 putative inner membrane protein 35601 35747 -1
CDS - ZP_02701566.1 SNSL317_A0037 HbiF 36396 36962 -1
CDS - ZP_02701567.1 SNSL317_A0038 conserved hypothetical protein 37022 37153 -1
CDS - ZP_02701569.1 SNSL317_A0039 protein YbgL 37477 38211 -1
CDS - ZP_02701570.1 SNSL317_A0040 allophanate hydrolase, subunit 2 38201 39133 -1
CDS - ZP_02701571.1 SNSL317_A0041 conserved hypothetical protein 39127 39783 -1
CDS - ZP_02701572.1 SNSL317_A0042 conserved hypothetical protein 39799 40542 -1
CDS - ZP_02701574.1 SNSL317_A0043 inner membrane transporter YbgH 40871 42352 1
CDS - ZP_02701575.1 SNSL317_A0044 deoxyribodipyrimidine photo-lyase 42391 43812 -1
CDS - ZP_02701576.1 SNSL317_A0045 conserved hypothetical protein 43923 44129 -1
CDS kdpA ZP_02701578.1 SNSL317_A0046 K+-transporting ATPase, A subunit 44555 46234 1
CDS kdpB ZP_02701579.1 SNSL317_A0047 K+-transporting ATPase, B subunit 46255 48303 1
CDS kdpC ZP_02701580.1 SNSL317_A0048 K+-transporting ATPase, C subunit 48312 48896 1
CDS - ZP_02701581.1 SNSL317_A0049 sensor protein KdpD 48893 51577 1
CDS - ZP_02701582.1 SNSL317_A0050 KDP operon transcriptional regulatory protein KdpE 51574 52251 1
CDS - ZP_02701583.1 SNSL317_A0051 conserved hypothetical protein 52502 52615 -1
CDS - ZP_02701585.1 SNSL317_A0052 ornithine decarboxylase, inducible 53013 55211 1
CDS - ZP_02701586.1 SNSL317_A0053 putrescine-ornithine antiporter 55208 56527 1
CDS - ZP_02701587.2 SNSL317_A0054 putative cytoplasmic protein 56574 57077 1
CDS pgm ZP_02701588.1 SNSL317_A0055 phosphoglucomutase, alpha-D-glucose phosphate-specific 57192 58832 -1
CDS seqA ZP_02701589.1 SNSL317_A0056 protein SeqA 58857 59399 -1
CDS ybfF ZP_02701590.1 SNSL317_A0057 esterase YbfF 59584 60354 1
CDS - ZP_02701591.2 SNSL317_A0059 hypothetical protein 60367 60489 -1
CDS - ZP_02701592.1 SNSL317_A0058 ribbon-helix-helix protein, CopG family 60488 60781 1
CDS fldA ZP_02701593.2 SNSL317_A0060 flavodoxin 60833 61462 1
CDS - ZP_02701595.1 SNSL317_A0061 ferric uptake regulation protein 61744 62196 1
CDS - ZP_02701596.1 SNSL317_A0062 LysR-family transcriptional regulator 62311 63237 1
CDS cobZ ZP_02701597.1 SNSL317_A0063 precorrin 3B synthase CobZ 63335 64738 1
CDS - ZP_02701598.1 SNSL317_A0064 citrate utilization protein B 64725 65864 1
CDS - ZP_02701599.1 SNSL317_A0065 citrate-proton symporter 65915 67219 1
CDS - ZP_02701600.1 SNSL317_A0066 YbfN 67268 67600 -1
CDS - ZP_02701601.1 SNSL317_A0067 outer membrane porin, OprD family 67650 69056 -1
CDS - ZP_03080195.1 SNSL317_A0068 hypothetical protein 69359 69472 -1
CDS glnS ZP_02701602.1 SNSL317_A0069 glutaminyl-tRNA synthetase 69508 71175 -1
CDS nagE ZP_02701603.1 SNSL317_A0070 pts system, N-acetylglucosamine-specific iibc component 71386 73338 -1
CDS nagB ZP_02701605.1 SNSL317_A0071 glucosamine-6-phosphate isomerase 73665 74465 1
CDS nagA2 ZP_02701606.1 SNSL317_A0072 N-acetylglucosamine-6-phosphate deacetylase 74525 75679 1
CDS nagC ZP_02701607.1 SNSL317_A0073 N-acetylglucosamine repressor 75684 76904 1
CDS - ZP_02701608.1 SNSL317_A0074 NagD protein 76951 77703 1
CDS asnB ZP_02701609.1 SNSL317_A0075 asparagine synthase 77993 79657 1
CDS - ZP_03080196.1 SNSL317_A0077 hypothetical protein 79768 79908 -1
tRNA - - SNSL317_A0076 tRNA-Met 79878 79956 1