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Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS alaS ZP_02660912.1 SeSB_A3145 alanyl-tRNA synthetase 545 3175 -1
CDS recX ZP_02660914.1 SeSB_A3146 regulatory protein RecX 3411 3911 -1
CDS recA ZP_02660915.1 SeSB_A3147 protein RecA 4028 5089 -1
CDS - ZP_02660916.1 SeSB_A3148 competence/damage-inducible protein CinA domain protein 5174 5671 -1
CDS mltB ZP_02660918.1 SeSB_A3149 lytic murein transglycosylase B 6149 7228 -1
CDS - ZP_02660919.1 SeSB_A3150 glucitol/sorbitol permease iic component (pts systemglucitol/sorbitol-specific eiic component) 7481 8044 1
CDS - ZP_02660920.1 SeSB_A3151 glucitol/sorbitol-specific phosphotransferase enzyme iib component 8041 9012 1
CDS - ZP_02660921.1 SeSB_A3152 glucitol/sorbitol-specific phosphotransferase enzyme iia component 9024 9386 1
CDS srlD ZP_02660922.1 SeSB_A3153 sorbitol-6-phosphate 2-dehydrogenase 9398 10177 1
CDS - ZP_02660923.1 SeSB_A3154 glucitol operon activator protein 10254 10613 1
CDS srlR ZP_02660925.1 SeSB_A3155 glucitol operon repressor 10811 11584 1
CDS gutQ ZP_02660926.1 SeSB_A3156 gutQ protein 11577 12542 1
CDS - ZP_02660927.1 SeSB_A3157 anaerobic nitric oxide reductase transcription regulator NorR 12539 14059 -1
CDS - ZP_02660928.1 SeSB_A3158 anaerobic nitric oxide reductase flavorubredoxin (FlRd) 14245 15684 1
CDS - ZP_02660929.1 SeSB_A3159 nitric oxide reductase FlRd-NAD(+) reductase (Flavorubredoxin reductase) 15681 16814 1
CDS hypF ZP_02660930.1 SeSB_A3160 [NiFe] hydrogenase maturation protein HypF 16911 19151 -1
CDS - ZP_02660932.1 SeSB_A3161 protein AegA 19297 19842 -1
CDS - ZP_02660933.1 SeSB_A3162 conserved hypothetical protein 19811 19945 -1
CDS - ZP_02660934.2 SeSB_A3163 conserved hypothetical protein 20043 20852 -1
CDS hycI ZP_02660935.1 SeSB_A3164 hydrogenase maturation peptidase HycI 20879 21349 -1
CDS - ZP_02660936.1 SeSB_A3165 formate hydrogenlyase maturation protein 21342 21752 -1
CDS hycG ZP_02660937.1 SeSB_A3166 formate hydrogenlyase, subunit G 21749 22516 -1
CDS hycF ZP_02660938.1 SeSB_A3167 formate hydrogenlyase, subunit F 22516 23058 -1
CDS hycE ZP_02660939.1 SeSB_A3168 formate hydrogenlyase, subunit E 23068 24777 -1
CDS hycD ZP_02660940.1 SeSB_A3169 formate hydrogenlyase, subunit D 24795 25718 -1
CDS hycC ZP_02660941.1 SeSB_A3170 formate hydrogenlyase, subunit C 25721 27547 -1
CDS hycB ZP_02660942.1 SeSB_A3171 formate hydrogenlyase, subunit B 27547 28155 -1
CDS - ZP_02660943.2 SeSB_A3172 hypothetical protein 28177 28290 -1
CDS - ZP_02660944.1 SeSB_A3173 formate hydrogenlyase regulatory protein 28301 28762 -1
CDS hypA ZP_02660946.1 SeSB_A3174 hydrogenase nickel insertion protein HypA 28972 29328 1
CDS hypB ZP_02660947.1 SeSB_A3175 hydrogenase isoenzymes nickel incorporation protein HypB 29397 30269 1
CDS hypC2 ZP_02660948.1 SeSB_A3176 hydrogenase assembly chaperone HypC/HupF 30260 30532 1
CDS hypD ZP_02660949.1 SeSB_A3177 hydrogenase expression/formation protein HypD 30532 31653 1
CDS hypE ZP_02660950.1 SeSB_A3178 hydrogenase expression/formation protein HypE 31650 32660 1
CDS - ZP_02660951.1 SeSB_A3179 sigma-54 interaction domain protein 32894 34957 1
CDS - ZP_02660952.1 SeSB_A3180 conserved hypothetical protein 35019 35363 -1
CDS - ZP_02660954.1 SeSB_A3181 periplasmic chelated iron-binding protein YfeA 35545 36462 1
CDS - ZP_02660955.1 SeSB_A3182 chelated iron transport system membrane protein YfeB 36459 37280 1
CDS - ZP_02660956.1 SeSB_A3183 chelated iron transport system membrane protein YfeC 37277 38137 1
CDS - ZP_02660957.1 SeSB_A3184 chelated iron transport system membrane protein YfeD 38128 38976 1
CDS - ZP_02660958.1 SeSB_A3185 secreted effector protein 39075 39941 -1
CDS - ZP_02660959.1 SeSB_A3186 transcriptional regulator 40144 40899 -1
CDS - ZP_02660961.1 SeSB_A3187 transcriptional regulator, AraC family 41284 42171 -1
CDS - ZP_02660964.2 SeSB_A3188 conserved hypothetical protein 42515 42877 -1
CDS - ZP_02660966.1 SeSB_A3190 type III secretion apparatus protein OrgA/MxiK 43611 44189 -1
CDS - ZP_02660967.1 SeSB_A3191 type III secretion apparatus lipoprotein, YscJ/HrcJ family protein 44182 44940 -1
CDS - ZP_02660968.2 SeSB_A3192 protein PrgJ 44937 45179 -1
CDS eprI ZP_02660969.1 SeSB_A3193 type III secretion apparatus needle protein 45261 45503 -1
CDS eprH ZP_02660970.2 SeSB_A3194 type III secretion apparatus protein PrgH/EprH 45528 46592 -1
CDS - ZP_02660972.1 SeSB_A3195 transcriptional regulator HilD 47022 47951 1
CDS - ZP_02660973.1 SeSB_A3196 transcriptional regulator HilA (Protein iagA) 49041 50702 1
CDS - ZP_02660974.1 SeSB_A3197 invasion protein IagB 50720 51202 1
CDS - ZP_02660975.2 SeSB_A3198 effector protein SptP 51256 52863 -1
CDS - ZP_02660976.1 SeSB_A3199 secretion chaparone 52874 53266 -1
CDS - ZP_02660977.2 SeSB_A3200 hypothetical protein 53293 53517 -1
CDS - ZP_02660978.1 SeSB_A3201 acyl carrier protein 53597 53845 -1
CDS - ZP_02660979.2 SeSB_A3202 invasion protein A 53864 55876 -1
CDS - ZP_02660980.1 SeSB_A3203 type III effector protein IpaD/SipD/SspD 55940 56962 -1
CDS - ZP_02660983.1 SeSB_A3205 cell invasion protein SipB (Effector protein sipB) 58290 60071 -1
CDS - ZP_02660984.1 SeSB_A3206 type III secretion low calcium response chaperone LcrH/SycD 60074 60571 -1
CDS - ZP_02660985.1 SeSB_A3207 surface presentation of antigens protein SpaS 60709 61779 -1
CDS epaR ZP_02660986.1 SeSB_A3208 type III secretion apparatus protein SpaR/YscT/HrcT 61766 62557 -1
CDS - ZP_02660987.1 SeSB_A3209 EpaQ 62561 62821 -1
CDS epaP ZP_02660988.1 SeSB_A3210 type III secretion apparatus protein, YscR/HrcR family protein 62847 63521 -1
CDS epaO ZP_02660989.1 SeSB_A3211 type III secretion apparatus protein, YscQ/HrcQ family protein 63511 64422 -1
CDS - ZP_02660990.1 SeSB_A3212 antigen presentation protein SpaN 64422 65432 -1
CDS - ZP_02660991.1 SeSB_A3213 virulence-associated secretory protein 65432 65875 -1
CDS - ZP_02660992.1 SeSB_A3214 flagellum-specific ATP synthase 65853 67148 -1
CDS - ZP_02660993.1 SeSB_A3215 surface presentation of antigens protein SpaK (Invasion protein invB) 67145 67552 -1
CDS - ZP_02660994.1 SeSB_A3216 invasion protein InvA 67576 69633 -1
CDS - ZP_02660995.1 SeSB_A3217 invasion protein InvE 69658 70776 -1
CDS - ZP_02660996.2 SeSB_A3218 type III secretion outer membrane pore, YscC/HrcC family protein 70773 72317 -1
CDS - ZP_02660997.1 SeSB_A3219 invasion protein 72458 73207 -1
CDS - ZP_02660998.1 SeSB_A3220 hypothetical protein 73306 73419 -1
CDS - ZP_02660999.1 SeSB_A3221 cell adherance/invasion protein 73565 74008 1
CDS - ZP_02661002.1 SeSB_A3222 putative transposase for transposon 75436 75660 -1
CDS - ZP_02661003.1 SeSB_A3223 serine/threonine-protein phosphatase 2 76088 76744 1
CDS - ZP_03166205.1 SeSB_A3224 putative cytoplasmic protein 76916 77101 -1
CDS - ZP_03166200.1 SeSB_A3225 hypothetical protein 77275 77388 -1
CDS mutS ZP_02661005.1 SeSB_A3226 DNA mismatch repair protein MutS 77596 80163 1
CDS - ZP_02661006.1 SeSB_A3227 putative cytoplasmic protein 80219 80599 -1
CDS - ZP_02661007.1 SeSB_A3228 major facilitator family transporter 80596 81804 -1
CDS - ZP_02661008.1 SeSB_A3229 transcriptional regulator, LysR family protein 81913 82824 1
CDS - ZP_02661009.1 SeSB_A3230 GntP 82866 84362 -1
CDS - ZP_02661010.1 SeSB_A3231 NAD dependent epimerase/dehydratase family protein 84359 85309 -1
CDS - ZP_02661011.1 SeSB_A3232 hydroxypyruvate isomerase 85349 86125 -1
CDS - ZP_02661012.1 SeSB_A3233 aldolase class II protein YgbL 86130 86768 -1
CDS - ZP_02661013.1 SeSB_A3234 YgbK domain protein 86765 88027 -1
CDS - ZP_02661014.1 SeSB_A3235 6-phosphogluconate dehydrogenase NAD-binding 88021 88944 -1
CDS - ZP_02661015.1 SeSB_A3236 transcriptional regulator, DeoR family protein 89141 89905 1
CDS - ZP_02661016.1 SeSB_A3237 transcriptional regulator HosA 89924 90328 -1
CDS kpdB ZP_02661017.1 SeSB_A3238 4-hydroxybenzoate decarboxylase, subunit B 90499 91092 1
CDS kpdC ZP_02661018.1 SeSB_A3239 4-hydroxybenzoate decarboxylase, subunit C 91092 92519 1
CDS kpdD ZP_02661019.1 SeSB_A3240 4-hydroxybenzoate decarboxylase, subunit D 92530 92766 1
CDS rpoS ZP_02661020.1 SeSB_A3241 RNA polymerase sigma factor RpoS 92812 93804 -1
CDS - ZP_02661021.1 SeSB_A3242 lipoprotein NlpD 93867 95000 -1
CDS pcm ZP_02661023.1 SeSB_A3244 protein-L-isoaspartate O-methyltransferase 95176 95802 -1
CDS surE ZP_02661024.2 SeSB_A3245 5'/3'-nucleotidase SurE 95796 96563 -1
CDS truD ZP_02661025.1 SeSB_A3246 tRNA pseudouridine synthase D 96538 97587 -1
CDS ispF ZP_02661026.1 SeSB_A3247 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 97584 98063 -1