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Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02661244.1 SeSB_A2458 putative phage terminase, small subunit, P27 family protein 552 1046 -1
CDS - ZP_02661245.2 SeSB_A2459 HnhC 1172 1522 -1
CDS - ZP_02661246.2 SeSB_A2460 hypothetical protein 1573 1905 -1
CDS - ZP_02661247.1 SeSB_A2461 putative Rz lytic protein 2368 2760 -1
CDS - ZP_02661248.1 SeSB_A2462 lytic enzyme 2757 3371 -1
CDS - ZP_02661249.1 SeSB_A2463 phage holin, lambda family protein 3374 3721 -1
CDS - ZP_02661250.1 SeSB_A2464 gifsy-1 prophage RegQ 3916 4605 -1
CDS - ZP_02661252.1 SeSB_A2465 bacteriophage Lambda NinG protein 4739 5350 -1
CDS - ZP_02661253.1 SeSB_A2466 conserved hypothetical protein 5353 5559 -1
CDS - ZP_02661254.1 SeSB_A2467 gifsy-2 prophage protein 5559 6161 -1
CDS - ZP_02661255.1 SeSB_A2468 conserved domain protein 6577 6810 -1
CDS - ZP_02661256.2 SeSB_A2469 conserved hypothetical protein 7102 7254 -1
CDS - ZP_02661258.1 SeSB_A2471 conserved hypothetical protein 7778 8125 -1
CDS - ZP_02661259.1 SeSB_A2472 DNA replication protein DnaC 8136 8885 -1
CDS - ZP_02661260.2 SeSB_A2473 gifsy-1 prophage PrpO 8888 9871 -1
CDS - ZP_03166214.1 SeSB_A2474 hypothetical protein 9849 9965 -1
CDS - ZP_03166207.1 SeSB_A2475 gifsy-1 prophage cI 9956 10105 -1
CDS - ZP_02661264.1 SeSB_A2476 conserved domain protein 11259 11375 1
CDS - ZP_02661265.1 SeSB_A2477 conserved hypothetical protein 11368 11526 1
CDS - ZP_02661267.1 SeSB_A2478 enterobacterial exodeoxyribonuclease VIII family protein 12025 14952 1
CDS - ZP_02661268.1 SeSB_A2479 gifsy-1 prophage protein 14963 16072 1
CDS - ZP_02661269.1 SeSB_A2480 putative cytoplasmic protein 16115 16354 1
CDS - ZP_02661271.1 SeSB_A2481 phage integrase family protein 16718 17899 -1
CDS - ZP_02661273.1 SeSB_A2482 exodeoxyribonuclease I (Exonuclease I) 18075 19505 1
CDS yeeF ZP_02661274.1 SeSB_A2484 amino acid permease 19641 20999 -1
CDS - ZP_03166211.1 SeSB_A2483 hypothetical protein 20974 21090 1
CDS - ZP_02661277.1 SeSB_A2485 LysR substrate binding domain protein 21285 22199 -1
CDS - ZP_02661278.1 SeSB_A2486 protein YeeZ 22245 23069 -1
CDS hisG ZP_02661281.1 SeSB_A2488 ATP phosphoribosyltransferase 23428 24327 1
CDS hisD ZP_02661282.1 SeSB_A2489 histidinol dehydrogenase 24430 25734 1
CDS hisC ZP_02661283.1 SeSB_A2490 histidinol-phosphate aminotransferase 25731 26810 1
CDS hisB ZP_02661284.1 SeSB_A2491 histidinol-phosphatase/imidazoleglycerol- phosphate dehydratase 26807 27874 1
CDS hisH ZP_02661285.1 SeSB_A2492 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 27874 28464 1
CDS hisA ZP_02661286.1 SeSB_A2493 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 28464 29201 1
CDS hisF ZP_02661287.1 SeSB_A2494 imidazoleglycerol phosphate synthase, cyclase subunit 29183 29959 1
CDS - ZP_02661288.1 SeSB_A2495 histidine biosynthesis bifunctional protein hisIE 29953 30564 1
CDS - ZP_02661289.2 SeSB_A2496 chain length determinant protein (Polysaccharide antigen chainregulator) 30646 31623 -1
CDS ugd ZP_02661290.1 SeSB_A2497 UDP-glucose 6-dehydrogenase 31772 32938 -1
CDS gnd ZP_02661291.1 SeSB_A2498 6-phosphogluconate dehydrogenase, decarboxylating 33175 34581 -1
CDS - ZP_02661293.1 SeSB_A2499 undecaprenyl-phosphate galactose phosphotransferase (Galactosyl-P-P-undecaprenol synthetase) 34745 36175 -1
CDS - ZP_02661294.1 SeSB_A2500 putative phosphomannomutase 36247 37680 -1
CDS - ZP_02661295.1 SeSB_A2501 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 37667 39106 -1
CDS - ZP_02661296.1 SeSB_A2502 putative O antigen biosynthesis rhamnosyltransferase 39107 40051 -1
CDS - ZP_02661297.1 SeSB_A2503 protein RfbU 40052 41113 -1
CDS - ZP_02661298.2 SeSB_A2504 Wzy 41110 42285 -1
CDS - ZP_02661300.2 SeSB_A2506 hypothetical protein 43003 43143 1
CDS - ZP_02661303.1 SeSB_A2509 O antigen biosynthesis abequosyltransferase RfbV 43697 44698 -1
CDS - ZP_02661304.2 SeSB_A2510 putative O-antigen transporter 44703 45983 -1
CDS - ZP_02661305.1 SeSB_A2511 CDP-abequose synthase (O4 antigen) 46077 46976 -1
CDS - ZP_02661306.1 SeSB_A2512 lipopolysaccharide biosynthesis protein RfbH 47004 48317 -1
CDS rfbG ZP_02661307.1 SeSB_A2513 CDP-glucose 4,6-dehydratase 48344 49423 -1
CDS rfbF ZP_02661308.1 SeSB_A2514 glucose-1-phosphate cytidylyltransferase 49428 50201 -1
CDS - ZP_02661309.1 SeSB_A2515 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase) 50217 51191 -1
CDS rfbC ZP_02661310.1 SeSB_A2516 dTDP-4-dehydrorhamnose 3,5-epimerase 51197 51745 -1
CDS rfbA ZP_02661311.2 SeSB_A2517 glucose-1-phosphate thymidylyltransferase 51749 52633 -1
CDS rfbD ZP_02661312.1 SeSB_A2518 dTDP-4-dehydrorhamnose reductase 52675 53574 -1
CDS galF ZP_02661314.1 SeSB_A2520 regulatory protein GalF 55025 55918 -1
CDS - ZP_02661315.1 SeSB_A2521 colanic acid biosynthesis protein WcaM 56096 57499 -1
CDS - ZP_02661316.1 SeSB_A2522 putative colanic acid biosynthesis glycosyltransferase WcaL 57510 58730 -1
CDS - ZP_02661317.1 SeSB_A2523 colanic acid biosynthesis protein WcaK 58727 60007 -1
CDS - ZP_02661318.2 SeSB_A2524 lipopolysaccharide biosynthesis protein WzxC 60029 61561 -1
CDS - ZP_02661319.1 SeSB_A2525 undecaprenyl-phosphate glucose phosphotransferase 61640 63034 -1
CDS cpsG ZP_02661320.1 SeSB_A2526 phosphomannomutase 63088 64458 -1
CDS cpsB ZP_02661321.1 SeSB_A2527 mannose-1-phosphate guanylyltransferase 64569 66005 -1
CDS wcaI ZP_02661322.1 SeSB_A2528 colanic acid biosynthesis glycosyl transferase WcaI 66008 67231 -1
CDS nudD ZP_02661323.1 SeSB_A2529 GDP-mannose mannosyl hydrolase 67228 67701 -1
CDS fcl ZP_02661324.1 SeSB_A2530 GDP-L-fucose synthetase 67704 68669 -1
CDS gmd ZP_02661325.1 SeSB_A2531 GDP-mannose 4,6-dehydratase 68672 69793 -1
CDS - ZP_02661326.1 SeSB_A2532 transferase hexapeptide repeat containing protein 69817 70371 -1
CDS - ZP_02661327.1 SeSB_A2533 putative colanic acid biosynthesis glycosyl transferase WcaE 70387 71133 -1
CDS - ZP_02661328.1 SeSB_A2534 putative colanic acid polymerase 71146 72360 -1
CDS - ZP_02661329.1 SeSB_A2535 putative colanic acid biosynthesis glycosyl transferase WcaC 72335 73552 -1
CDS - ZP_02661330.1 SeSB_A2536 putative colanic acid biosynthesis acetyltransferase WcaB 73549 74037 -1
CDS - ZP_02661331.2 SeSB_A2537 putative colanic acid biosynthesis glycosyl transferase WcaA 74040 74951 -1
CDS - ZP_02661332.1 SeSB_A2538 chain length determinant protein 74969 77128 -1
CDS wzb ZP_02661333.1 SeSB_A2539 low molecular weight protein-tyrosine-phosphatase wzb 77125 77574 -1
CDS - ZP_02661334.2 SeSB_A2540 polysaccharide biosynthesis/export protein 77580 78635 -1
CDS - ZP_02661335.1 SeSB_A2541 hypothetical protein 78655 78768 1
CDS - ZP_02661338.1 SeSB_A2543 AsmA family protein 81060 82916 -1
CDS dcd ZP_02661339.1 SeSB_A2544 deoxycytidine triphosphate deaminase 82955 83536 -1
CDS udk ZP_02661340.1 SeSB_A2545 uridine kinase 83627 84268 -1
CDS - ZP_02661341.1 SeSB_A2546 conserved hypothetical protein 84344 84514 -1
CDS - ZP_02661342.2 SeSB_A2547 PAS domain protein 84593 87589 1
CDS - ZP_02661343.1 SeSB_A2548 DNA-3-methyladenine glycosylase 2 (dna-3-methyladenineglycosylase ii) 87557 88426 -1
CDS - ZP_02661344.1 SeSB_A2549 conserved hypothetical protein 88560 89912 1
CDS - ZP_02661345.1 SeSB_A2551 hypothetical protein 90149 90265 -1
CDS - ZP_02661346.1 SeSB_A2552 multidrug resistance protein MdtA (Multidrug transportermdtA) 90353 91594 1
CDS - ZP_02661347.1 SeSB_A2553 RND transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1) and Heavy Metal Efflux (HME) families, permease protein 91594 94716 1
CDS mdtC ZP_02661348.1 SeSB_A2554 multidrug resistance protein MdtC 94717 97797 1
CDS - ZP_02661349.1 SeSB_A2555 inner membrane transport protein YieO 97794 99206 1
CDS - ZP_02661350.1 SeSB_A2556 signal transduction histidine-protein kinase BaeS 99206 100609 1
CDS - ZP_02661351.1 SeSB_A2557 response regulator 100606 101328 1
CDS - ZP_02661352.1 SeSB_A2558 putative cytoplasmic protein 101597 102799 1
CDS - ZP_02661353.1 SeSB_A2559 putative inner membrane protein 102799 103515 1
CDS - ZP_02661354.1 SeSB_A2560 hypothetical protein 103526 105637 1
CDS - ZP_02661355.1 SeSB_A2561 peptidase, U32 family protein 105753 107114 1
CDS - ZP_03166209.1 SeSB_A2563 Tir chaperone 107755 108024 -1
CDS - ZP_02661359.1 SeSB_A2564 conserved hypothetical protein 108987 109103 -1
CDS - ZP_02661361.1 SeSB_A2565 conserved hypothetical protein 109187 110086 1
CDS yegT ZP_02661363.2 SeSB_A2567 nucleoside transporter 111400 112716 1