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Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02661956.2 SeSB_A4551 hypothetical protein 908 1021 -1
CDS - ZP_02661957.1 SeSB_A4552 hypothetical protein 1151 1339 1
CDS - ZP_02661958.2 SeSB_A4553 putative prophage membrane protein 1474 1818 1
CDS - ZP_02661959.1 SeSB_A4554 putative prophage membrane protein 1805 2086 1
CDS - ZP_02661960.1 SeSB_A4555 lytic enzyme 2086 2700 1
CDS - ZP_02661961.1 SeSB_A4556 protein gp55 2697 3239 1
CDS - ZP_02661962.2 SeSB_A4557 conserved hypothetical protein 3342 3845 1
CDS - ZP_02661963.1 SeSB_A4558 putative prophage protein 3880 4257 1
CDS - ZP_02661964.1 SeSB_A4559 putative phage terminase, small subunit, P27 family protein 4390 4854 1
CDS - ZP_02661965.1 SeSB_A4560 putative phage terminase, large subunit 4874 6550 1
CDS - ZP_02661966.1 SeSB_A4561 phage portal protein, HK97 family protein 6550 7854 1
CDS - ZP_02661967.1 SeSB_A4562 ClpP protease 7868 8716 1
CDS - ZP_02661968.1 SeSB_A4563 phage major capsid protein, HK97 family protein 8726 9943 1
CDS - ZP_02661969.1 SeSB_A4564 conserved hypothetical protein 9987 10247 1
CDS - ZP_02661970.1 SeSB_A4565 phage protein 10247 10570 1
CDS - ZP_02661971.1 SeSB_A4566 putative phage head-tail adaptor 10582 10995 1
CDS - ZP_02661972.1 SeSB_A4567 conserved hypothetical protein 10967 11479 1
CDS - ZP_02661973.1 SeSB_A4568 conserved hypothetical protein 11476 12021 1
CDS - ZP_02661974.1 SeSB_A4569 conserved hypothetical protein 12043 12207 1
CDS - ZP_02661975.1 SeSB_A4570 bacteriophage Mu tail sheath protein (GpL) 12197 13693 1
CDS - ZP_02661976.1 SeSB_A4571 tail tube protein 13693 14049 1
CDS - ZP_02661977.1 SeSB_A4572 conserved hypothetical protein 14046 14372 1
CDS - ZP_02661978.1 SeSB_A4573 tail protein 14457 16382 1
CDS - ZP_02661979.2 SeSB_A4574 conserved hypothetical protein 16615 16848 1
CDS - ZP_02661980.1 SeSB_A4575 tail/DNA circulation protein 16908 18248 1
CDS - ZP_02661981.1 SeSB_A4576 bacteriophage Mu P protein 18245 19303 1
CDS - ZP_02661982.1 SeSB_A4577 bacteriophage Mu Gp45 protein 19303 19836 1
CDS - ZP_02661983.1 SeSB_A4578 phage protein GP46 19841 20254 1
CDS - ZP_02661984.1 SeSB_A4579 tail protein 20247 21326 1
CDS - ZP_02661985.1 SeSB_A4580 tail protein 21329 21916 1
CDS - ZP_02661986.1 SeSB_A4581 putative phage tail fiber protein 21903 22997 1
CDS - ZP_02661987.1 SeSB_A4582 fels-2 prophage Tfa 23004 23411 1
CDS - ZP_02661988.1 SeSB_A4583 guanine nucleotide exchange factor SopE (Effector protein sopE) 23608 24330 -1
CDS - ZP_02661989.1 SeSB_A4585 DNA-invertase 24855 25418 1
CDS - ZP_02661990.1 SeSB_A4586 DNA-damage-inducible protein 25562 25810 -1
CDS - ZP_02661991.1 SeSB_A4587 phage integrase family protein 25872 26969 -1
CDS - ZP_02661992.1 SeSB_A4588 tRNA-dihydrouridine synthase A 27058 28095 1
CDS - ZP_02661995.1 SeSB_A4590 oxidoreductase, zinc-binding dehydrogenase family 28680 29663 -1
CDS dnaB ZP_02661996.1 SeSB_A4591 replicative DNA helicase 29728 31143 1
CDS alr ZP_02661997.1 SeSB_A4592 alanine racemase 31175 32254 1
CDS - ZP_02661998.2 SeSB_A4593 hypothetical protein 32211 32360 -1
CDS - ZP_02661999.1 SeSB_A4594 aromatic-amino-acid aminotransferase (aroat) 32440 33633 1
CDS aphA ZP_02662000.1 SeSB_A4595 had superfamily (subfamily iiib) phosphatase 33820 34533 1
CDS - ZP_02662001.1 SeSB_A4596 conserved hypothetical protein 34662 35078 1
CDS - ZP_02662002.1 SeSB_A4597 protein YjbR 35081 35437 1
CDS - ZP_02662003.1 SeSB_A4598 conserved hypothetical protein 35438 35776 -1
CDS - ZP_02662004.2 SeSB_A4599 conserved hypothetical protein 35763 36206 -1
CDS uvrA ZP_02662005.1 SeSB_A4600 excinuclease ABC, A subunit 36350 39175 -1
CDS ssb ZP_02662007.1 SeSB_A4601 single-stranded DNA-binding protein 39423 39953 1
CDS - ZP_03166230.1 SeSB_A4602 hypothetical protein 40101 40226 1
CDS - ZP_02662010.1 SeSB_A4603 hypothetical protein 40344 40484 1
CDS - ZP_02662012.1 SeSB_A4604 hypothetical protein 40993 41625 1
CDS - ZP_02662013.1 SeSB_A4605 putative integral membrane protein 41622 43010 1
CDS - ZP_03166231.1 SeSB_A4606 putative ABC exporter outer membrane component 43393 44319 1
CDS - ZP_03166228.1 SeSB_A4607 conserved hypothetical protein 44343 45593 1
CDS - ZP_02662016.1 SeSB_A4608 putative Ig domain protein 45610 62295 1
CDS - ZP_02662017.1 SeSB_A4609 putative type-1 secretion protein 62335 64401 1
CDS - ZP_02662020.1 SeSB_A4611 cyclic diguanylate phosphodiesterase (EAL) domain protein 65523 67124 1
CDS - ZP_02662021.1 SeSB_A4612 transposon tn10 tetd protein (orfr) 67112 67435 -1
CDS soxR ZP_02662022.1 SeSB_A4613 redox-sensitive transcriptional activator SoxR 67522 67980 1
CDS - ZP_02662024.1 SeSB_A4614 glutathione S-transferase domain protein 68273 68941 1
CDS - ZP_02662025.2 SeSB_A4615 hypothetical protein 68922 69143 -1
CDS - ZP_02662026.1 SeSB_A4616 inorganic anion transporter, sulfate permease (SulP) family protein 69289 70638 1
CDS - ZP_03166232.1 SeSB_A4617 Na+/H+ antiporter 70743 72434 1
CDS - ZP_02662029.1 SeSB_A4619 LysR family regulatory protein 72529 73416 -1
CDS - ZP_02662030.2 SeSB_A4618 LrgA family protein 73415 73930 1
CDS - ZP_02662031.1 SeSB_A4620 LrgB family protein 73923 74612 1
CDS actP ZP_02662032.1 SeSB_A4621 cation/acetate symporter ActP 74651 76300 -1
CDS - ZP_02662033.1 SeSB_A4622 putative membrane protein 76297 76611 -1
CDS acsA ZP_02662034.1 SeSB_A4623 acetate--CoA ligase 76851 78809 -1
CDS nrfA ZP_02662037.1 SeSB_A4624 formate-dependent cytochrome c nitrite reductase, c552 subunit 79241 80677 1
CDS nrfB ZP_02662038.1 SeSB_A4625 cytochrome c nitrite reductase, pentaheme subunit 80789 81355 1
CDS nrfC ZP_02662039.1 SeSB_A4626 cytochrome c nitrite reductase, Fe-S protein 81352 82023 1
CDS nrfD ZP_02662040.1 SeSB_A4627 cytochrome c nitrite reductase, NrfD subunit 82020 82976 1
CDS ccmF ZP_02662041.1 SeSB_A4628 cytochrome c-type biogenesis protein CcmF 82969 84705 1
CDS - ZP_02662042.1 SeSB_A4629 cytochrome c-type biogenesis protein 84698 85207 1
CDS - ZP_02662043.1 SeSB_A4630 formate-dependent nitrite reductase complex subunit NrfG 85204 85824 1
CDS - ZP_02662044.1 SeSB_A4631 conserved hypothetical protein 85964 86092 -1
CDS - ZP_02662045.1 SeSB_A4632 proton glutamate symport protein (Glutamate-aspartate carrierprotein) 86169 87479 1
CDS - ZP_02662047.1 SeSB_A4633 tetratricopeptide repeat protein 87637 88326 -1
CDS - ZP_02662052.1 SeSB_A4636 membrane-bound beta-hydroxylase 91022 91930 -1
CDS - ZP_02662053.1 SeSB_A4637 protein PhnO 92188 92622 -1
CDS - ZP_02662054.1 SeSB_A4638 protein PhnB 92774 93217 -1
CDS phnA ZP_02662055.1 SeSB_A4639 alkylphosphonate utilization operon protein PhnA 93337 93672 -1
CDS - ZP_02662056.1 SeSB_A4640 MFS family, low-affinity proline transporter 94140 95642 1
CDS - ZP_02662058.1 SeSB_A4641 sensor protein BasS/pmrB 95809 96888 -1
CDS - ZP_02662059.1 SeSB_A4642 transcriptional regulatory protein BasR/pmrA 96889 97557 -1
CDS - ZP_02662060.1 SeSB_A4643 membrane protein YjdB 97554 99197 -1
CDS - ZP_02662061.1 SeSB_A4644 arginine/agmatine antiporter 99331 100668 -1
CDS - ZP_03166229.1 SeSB_A4645 porin thermoregulatory protein EnvY 100808 101539 -1
CDS adiA ZP_02662065.2 SeSB_A4646 biodegradative arginine decarboxylase 101867 104137 -1
CDS - ZP_02662066.2 SeSB_A4647 melibiose operon regulatory protein 104367 105257 -1
CDS - ZP_02662067.2 SeSB_A4648 alpha-galactosidase (Melibiase) 105568 106923 1
CDS - ZP_02662068.1 SeSB_A4649 melibiose carrier protein (thiomethylgalactoside permease II) 107007 108437 1
CDS fumB ZP_02662069.1 SeSB_A4650 fumarate hydratase class I, anaerobic 108526 110172 -1
CDS - ZP_02662070.1 SeSB_A4651 C4-dicarboxylate membrane transporter 110268 111608 -1
CDS - ZP_02662072.1 SeSB_A4652 conserved hypothetical protein 111755 112021 -1
CDS - ZP_02662073.1 SeSB_A4653 response regulator 112338 113057 -1
CDS - ZP_02662074.1 SeSB_A4654 sensor protein DcuS 113054 114685 -1
CDS - ZP_02662075.1 SeSB_A4655 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein 115060 117489 1