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Salmonella enterica subsp. enterica serovar Virchow str. SL491, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - SeV_B0001 Small subunit ribosomal RNA 56 587 -1
CDS - ZP_03215109.1 SeV_B0003 D,D-heptose 1,7-bisphosphate phosphatase 983 1549 -1
CDS metN ZP_03213906.1 SeV_B0004 D-methionine ABC transporter, ATP-binding protein 1739 2770 1
CDS metI ZP_03214182.1 SeV_B0005 D-methionine ABC transporter, permease protein 2763 3416 1
CDS metQ ZP_03213554.1 SeV_B0006 D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein 3455 4270 1
CDS rcsF ZP_03214848.1 SeV_B0007 exopolysaccharide synthesis regulator RcsF 4389 4793 1
CDS - ZP_03215478.1 SeV_B0008 conserved hypothetical protein 4757 5497 1
CDS proS ZP_03213541.1 SeV_B0009 prolyl-tRNA synthetase 5608 7326 1
CDS - ZP_03214217.1 SeV_B0010 copper homeostasis protein CutF 7400 8101 -1
CDS - ZP_03215188.1 SeV_B0011 peptidyl-tRNA hydrolase domain protein 8133 8555 -1
CDS - ZP_03214621.1 SeV_B0012 conserved hypothetical protein 8552 9097 -1
CDS - ZP_03215226.1 SeV_B0013 conserved hypothetical protein 9295 9495 1
CDS rof ZP_03213443.1 SeV_B0014 rof protein 9548 9742 1
CDS tilS ZP_03214041.1 SeV_B0015 tRNA(Ile)-lysidine synthase 9826 11118 -1
CDS - ZP_03215015.1 SeV_B0016 glyoxylase family protein 11181 11570 -1
CDS ldcC ZP_03214192.1 SeV_B0017 lysine decarboxylase, constitutive 11626 13767 -1
CDS accA ZP_03214075.1 SeV_B0020 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 15786 16745 -1
CDS dnaE ZP_03214499.1 SeV_B0021 DNA polymerase III, alpha subunit 16758 20240 -1
CDS rnhB ZP_03215379.1 SeV_B0022 ribonuclease HII 20264 20860 -1
CDS lpxB ZP_03213684.1 SeV_B0023 lipid-A-disaccharide synthase 20857 22005 -1
CDS lpxA ZP_03214468.1 SeV_B0024 acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase 22005 22793 -1
CDS fabZ ZP_03214962.1 SeV_B0025 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 22797 23252 -1
CDS lpxD ZP_03213302.1 SeV_B0026 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 23358 24383 -1
CDS skp ZP_03213629.1 SeV_B0027 chaperone protein Skp 24387 24872 -1
CDS yaeT ZP_03215680.1 SeV_B0028 outer membrane protein assembly complex, YaeT protein 24995 27427 -1
CDS rseP ZP_03214871.1 SeV_B0029 RIP metalloprotease RseP 27459 28811 -1
CDS cdsA1 ZP_03213963.1 SeV_B0030 phosphatidate cytidylyltransferase 28823 29680 -1
CDS uppS ZP_03215684.1 SeV_B0031 di-trans,poly-cis-decaprenylcistransferase 29693 30451 -1
CDS dxr ZP_03215393.1 SeV_B0032 1-deoxy-D-xylulose 5-phosphate reductoisomerase 30764 32047 -1
CDS frr ZP_03214794.1 SeV_B0033 ribosome releasing factor 32102 32659 -1
CDS pyrH ZP_03213719.1 SeV_B0034 UMP kinase 32806 33531 -1
CDS tsf ZP_03215387.1 SeV_B0035 translation elongation factor Ts 33676 34527 -1
CDS rpsB ZP_03214981.1 SeV_B0036 ribosomal protein S2 34785 35510 -1
CDS map ZP_03213405.1 SeV_B0038 methionine aminopeptidase, type I 35961 36755 1
CDS glnD ZP_03213452.1 SeV_B0039 protein-P-II uridylyltransferase 36993 39665 1
CDS dapD ZP_03215671.1 SeV_B0040 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 39695 40519 1
CDS - ZP_03215073.1 SeV_B0041 shikimate transporter 40556 41857 -1
CDS - ZP_03214422.1 SeV_B0042 protein YaeH 42104 42490 1
CDS - ZP_03213436.1 SeV_B0043 carbohydrate diacid regulator 42579 43736 -1
CDS degP ZP_03215309.1 SeV_B0044 protease Do 43889 45316 -1
CDS dgt ZP_03215717.1 SeV_B0045 deoxyguanosinetriphosphate triphosphohydrolase 45446 47005 -1
CDS mtnN ZP_03214055.1 SeV_B0046 MTA/SAH nucleosidase 47048 47746 1
CDS - ZP_03214356.1 SeV_B0047 cobalamin periplasmic binding protein 47751 48539 1
CDS - ZP_03214988.1 SeV_B0048 inner membrane protein YadS 48576 49199 1
CDS yadR ZP_03215895.1 SeV_B0049 iron-sulfur cluster assembly accessory protein YadR 49300 49644 -1
CDS - ZP_03213695.1 SeV_B0050 chloride transporter, chloride channel family 49726 51147 -1
CDS hemL ZP_03213106.1 SeV_B0052 glutamate-1-semialdehyde-2,1-aminomutase 51317 52597 1
CDS - ZP_03213869.1 SeV_B0053 conserved hypothetical protein 52705 53346 -1
CDS - ZP_03214658.1 SeV_B0054 minor fimbrial subunit StfG 53550 54080 -1
CDS - ZP_03215869.1 SeV_B0055 fimbrial subunit 54080 54556 -1
CDS - ZP_03215837.1 SeV_B0056 putative minor fimbrial subunit 54553 55065 -1
CDS - ZP_03213474.1 SeV_B0057 chaperone protein PapD 55084 55836 -1
CDS - ZP_03213533.1 SeV_B0058 fimbrial usher protein 55854 58511 -1
CDS - ZP_03215432.1 SeV_B0059 putative fimbrial subunit 58597 59157 -1
CDS - ZP_03215193.1 SeV_B0060 hypothetical protein 59374 59517 -1
CDS - ZP_03214178.1 SeV_B0061 hypothetical protein 59568 59693 1
CDS - ZP_03214910.1 SeV_B0062 hypothetical protein 59796 59909 1
CDS fhuC ZP_03213183.1 SeV_B0065 ferrichrome ABC transporter, ATP-binding protein 63041 63838 -1
CDS fhuA ZP_03215541.1 SeV_B0066 ferrichrome-iron receptor 63887 66076 -1
CDS mrcB ZP_03214589.1 SeV_B0067 penicillin-binding protein 1B 66369 68891 -1
CDS hrpB ZP_03214018.1 SeV_B0068 ATP-dependent helicase HrpB 69032 71506 -1
CDS - ZP_03213414.1 SeV_B0069 2'-5' RNA ligase 71534 72064 1
CDS sfsA ZP_03215284.1 SeV_B0070 sugar fermentation stimulation protein 72081 72785 1
CDS dksA ZP_03213943.1 SeV_B0071 RNA polymerase-binding protein DksA 72962 73417 1
CDS - ZP_03213928.1 SeV_B0072 glutamyl-Q tRNA 73441 74382 1
CDS - ZP_03213169.1 SeV_B0073 poly(A) polymerase 74577 75941 1
CDS folK ZP_03215560.1 SeV_B0074 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 75938 76417 1
CDS panB ZP_03214261.1 SeV_B0075 3-methyl-2-oxobutanoate hydroxymethyltransferase 76538 77329 1
CDS panC ZP_03215845.1 SeV_B0076 pantoate--beta-alanine ligase 77455 78309 1
CDS panD ZP_03215119.1 SeV_B0077 aspartate 1-decarboxylase 78404 78784 1
CDS - ZP_03214224.1 SeV_B0078 major fimbrial subunit 79062 79667 1
CDS - ZP_03214700.1 SeV_B0079 chaperone protein EcpD 79754 80506 1
CDS - ZP_03215280.1 SeV_B0080 fimbrial usher protein 80574 83171 1
CDS - ZP_03213399.1 SeV_B0081 putative fimbrial protein 83251 83778 1
CDS - ZP_03213270.1 SeV_B0082 putative fimbrial protein 83805 84362 1
CDS - ZP_03214101.1 SeV_B0083 putative fimbrial protein 84381 84980 1
CDS - ZP_03215888.1 SeV_B0084 putative fimbrial protein 84992 86053 1
CDS - ZP_03213711.1 SeV_B0085 polysaccharide deacetylase domain protein 86055 87284 -1
CDS - ZP_03214863.1 SeV_B0086 PTS system, IIA component 87346 87786 -1
CDS - ZP_03215407.1 SeV_B0087 putative fimbrial subunit 88156 88695 1
CDS - ZP_03213670.1 SeV_B0088 chaperone protein FimC 88743 89426 1
CDS - ZP_03215550.1 SeV_B0089 fimbrial usher protein 89453 91999 1
CDS - ZP_03214913.1 SeV_B0090 putative fimbriae 92008 93084 1
CDS - ZP_03214460.1 SeV_B0091 ABC transporter, permease protein 93198 93968 -1
CDS - ZP_03213847.1 SeV_B0092 ABC transporter, ATP-binding protein 93965 94891 -1
CDS - ZP_03215741.1 SeV_B0093 carbonate dehydratase 95000 95662 1
CDS hpt ZP_03215144.1 SeV_B0094 hypoxanthine phosphoribosyltransferase 95720 96256 -1
CDS gcd ZP_03214775.1 SeV_B0095 quinoprotein glucose dehydrogenase 96609 98852 1
CDS - ZP_03214283.1 SeV_B0096 blue copper oxidase CueO 98930 100540 -1
CDS - ZP_03213095.1 SeV_B0097 conserved hypothetical protein 100742 101089 1
CDS speE ZP_03214313.1 SeV_B0098 spermidine synthase 101196 102056 1
CDS speD ZP_03214632.1 SeV_B0099 S-adenosylmethionine decarboxylase proenzyme 102077 102871 1
CDS - ZP_03215260.1 SeV_B0100 DeoR-family transcriptional regulator 102901 103668 -1
CDS pdxA ZP_03213969.1 SeV_B0101 4-hydroxythreonine-4-phosphate dehydrogenase 103678 104661 -1
CDS - ZP_03213516.1 SeV_B0102 putative inner membrane protein 104651 105922 -1
CDS - ZP_03215247.1 SeV_B0103 2-keto-3-deoxygluconate permease 105919 106872 -1
CDS - ZP_03214812.1 SeV_B0104 hypothetical protein 106951 107064 -1
CDS - ZP_03213649.1 SeV_B0105 protein YacL 107107 107469 -1
CDS - ZP_03213215.1 SeV_B1809 hypothetical protein 107652 107822 1
CDS - ZP_03214953.1 SeV_B0107 low molecular weight phosphotyrosine protein phosphatase 107740 108063 1