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Selenomonas flueggei ATCC 43531, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - HMPREF0908_r0001 16S ribosomal RNA 1 471 -1
CDS - ZP_04657861.1 HMPREF0908_0001 PP-loop family ATPase 913 1695 1
CDS - ZP_04657862.1 HMPREF0908_0002 hypothetical protein 1717 2268 1
CDS relA ZP_04657863.1 HMPREF0908_0003 GTP diphosphokinase 2389 4608 -1
CDS - ZP_04657864.1 HMPREF0908_0004 possible single-stranded-DNA-specific exonuclease RecJ 4598 6613 -1
CDS secF ZP_04657865.1 HMPREF0908_0005 protein translocase subunit SecF 6660 7577 -1
CDS secD ZP_04657866.1 HMPREF0908_0006 protein translocase subunit SecD 7570 8799 -1
CDS - ZP_04657867.1 HMPREF0908_0007 5-formyltetrahydrofolate cyclo-ligase 8833 9429 -1
CDS - ZP_04657868.1 HMPREF0908_0008 preprotein translocase subunit YajC 9440 9721 -1
CDS tgt ZP_04657869.1 HMPREF0908_0009 tRNA-guanine transglycosylase 9735 10757 -1
CDS - ZP_04657870.1 HMPREF0908_0010 Trk family potassium (K+) transporter, NAD+ binding protein 11100 12449 1
CDS - ZP_04657871.1 HMPREF0908_0011 Trk family K+ transporter, membrane protein 12449 13888 1
CDS - ZP_04657872.1 HMPREF0908_0012 Trk family K+ transporter, membrane protein 13895 15343 1
CDS - ZP_04657873.1 HMPREF0908_0013 protein of hypothetical function DUF901 15385 15918 -1
CDS - ZP_04657874.1 HMPREF0908_0014 tRNA/rRNA methyltransferase 15920 16738 -1
CDS thyX ZP_04657875.1 HMPREF0908_0015 possible thymidylate synthase (FAD) 16738 17376 -1
CDS - ZP_04657876.1 HMPREF0908_0016 conserved hypothetical protein 17336 17866 -1
CDS cysS ZP_04657877.1 HMPREF0908_0017 cysteinyl-tRNA synthetase 17874 19304 -1
CDS cysE ZP_04657878.1 HMPREF0908_0018 serine O-acetyltransferase 19301 20035 -1
CDS - ZP_04657879.1 HMPREF0908_0019 possible competence protein FB 20203 20523 -1
CDS - ZP_04657880.1 HMPREF0908_0020 conserved hypothetical protein 20520 23183 -1
tRNA - - HMPREF0908_t0001 tRNA-Arg 23309 23383 -1
CDS - ZP_04657881.1 HMPREF0908_0021 hypothetical protein 23416 24117 -1
CDS - ZP_04657882.1 HMPREF0908_0022 transcriptional regulator 24117 24827 -1
CDS - ZP_04657883.1 HMPREF0908_0023 possible thioredoxin-disulfide reductase 24873 25733 -1
CDS prs ZP_04657884.1 HMPREF0908_0024 ribose-phosphate diphosphokinase 25803 26756 -1
CDS glmU ZP_04657885.1 HMPREF0908_0025 UDP-N-acetylglucosamine diphosphorylase 26891 28255 -1
CDS - ZP_04657886.1 HMPREF0908_0026 GntR family transcriptional regulator 28327 29106 -1
CDS ispE ZP_04657887.1 HMPREF0908_0027 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 29103 29978 -1
CDS - ZP_04657888.1 HMPREF0908_0028 DNA replication factor Y 30065 32479 -1
CDS - ZP_04657889.1 HMPREF0908_0029 conserved hypothetical protein 32558 32935 -1
CDS - ZP_04657890.1 HMPREF0908_0030 cupin 2 domain protein 33084 33461 1
CDS - ZP_04657891.1 HMPREF0908_0031 nitrite reductase (cytochrome; ammonia-forming) 33554 34858 -1
CDS - ZP_04657892.1 HMPREF0908_0032 cytochrome c nitrate reductase, small subunit 34851 35333 -1
CDS - ZP_04657893.1 HMPREF0908_0033 cytochrome c assembly protein 35350 37491 -1
CDS - ZP_04657894.1 HMPREF0908_0034 conserved hypothetical protein 37488 37862 -1
CDS - ZP_04657895.1 HMPREF0908_0035 heme exporter protein C 37855 38472 -1
CDS ccmB ZP_04657896.1 HMPREF0908_0036 cytochrome c family biogenesis protein CcmB 38485 39054 -1
CDS ccmA ZP_04657897.1 HMPREF0908_0037 ABC superfamily ATP binding cassette transporter ABC protein 39098 39754 -1
CDS - ZP_04657898.1 HMPREF0908_0038 possible pyridoxine 4-dehydrogenase 39956 40921 -1
CDS mtlD ZP_04657899.1 HMPREF0908_0039 mannitol-1-phosphate 5-dehydrogenase 41237 42394 -1
CDS mtlA ZP_04657900.1 HMPREF0908_0040 protein-N(pi)-phosphohistidine--sugar phosphotransferase 42401 44338 -1
CDS - ZP_04657901.1 HMPREF0908_0041 MtlR transcriptional regulator 44384 46510 -1
CDS gcp ZP_04657902.1 HMPREF0908_0042 O-sialoglycoprotein endopeptidase 46599 47621 -1
CDS - ZP_04657903.1 HMPREF0908_0043 SSU ribosomal protein S18P alanine acetyltransferase 47584 48075 -1
CDS - ZP_04657904.1 HMPREF0908_0044 M22 family O-sialoglycoprotein endopeptidase 48072 48785 -1
CDS - ZP_04657905.1 HMPREF0908_0045 ATP-binding protein 48775 49251 -1
CDS - ZP_04657906.1 HMPREF0908_0046 possible 16S rRNA processing protein 49385 49894 -1
CDS - ZP_04657907.1 HMPREF0908_0047 possible 16S rRNA processing protein RimM 49866 50276 -1
CDS - ZP_04657908.1 HMPREF0908_0048 RNA binding protein 50357 50584 -1
CDS - ZP_04657909.1 HMPREF0908_0049 ribosomal protein S16 50675 50950 -1
CDS - ZP_04657910.1 HMPREF0908_0050 signal recognition particle protein Ffh 50983 52359 -1
CDS - ZP_04657911.1 HMPREF0908_0051 transcriptional regulator 52356 52721 -1
CDS - ZP_04657912.1 HMPREF0908_0052 hemerythrin HHE cation binding domain protein 52867 54312 -1
CDS - ZP_04657913.1 HMPREF0908_0053 endopeptidase Clp 54478 57051 -1
CDS - ZP_04657914.1 HMPREF0908_0054 glutamine synthetase, catalytic like protein 57183 59075 -1