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Selenomonas flueggei ATCC 43531, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - HMPREF0908_r0002 5S ribosomal RNA 217 333 1
tRNA - - HMPREF0908_t0009 tRNA-His 383 458 1
tRNA - - HMPREF0908_t0010 tRNA-Trp 460 535 1
CDS - ZP_04658471.1 HMPREF0908_0611 hypothetical protein 674 1231 1
CDS - ZP_04658472.1 HMPREF0908_0612 GTP-binding protein 1385 3202 1
CDS - ZP_04658473.1 HMPREF0908_0613 hypothetical protein 3394 3909 1
CDS - ZP_04658474.1 HMPREF0908_0614 hypothetical protein 3901 4155 -1
CDS - ZP_04658475.1 HMPREF0908_0615 ribosomal protein S2 4111 4815 1
CDS tsf ZP_04658476.1 HMPREF0908_0616 elongation factor Ts 4867 5754 1
CDS pyrH ZP_04658477.1 HMPREF0908_0617 UMP kinase 5894 6592 1
CDS - ZP_04658478.1 HMPREF0908_0618 peptide chain release factor RF4 6589 7146 1
CDS - ZP_04658479.1 HMPREF0908_0619 hypothetical protein 7146 7379 1
CDS uppS ZP_04658480.1 HMPREF0908_0620 di-trans,poly-cis-decaprenylcistransferase 7448 8257 1
CDS cdsA ZP_04658481.1 HMPREF0908_0621 possible phosphatidate cytidylyltransferase 8272 9093 1
CDS - ZP_04658482.1 HMPREF0908_0622 membrane-associated zinc metalloprotease 9114 10154 1
CDS ispG ZP_04658483.1 HMPREF0908_0623 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10163 11242 1
CDS proS ZP_04658484.1 HMPREF0908_0624 proline--tRNA ligase 11239 12951 1
CDS - ZP_04658485.1 HMPREF0908_0625 hypothetical protein 13022 13759 1
CDS - ZP_04658486.1 HMPREF0908_0626 heat shock protein Hsp20 13868 14314 1
CDS cheR ZP_04658487.1 HMPREF0908_0627 protein-glutamate O-methyltransferase 14361 15149 1
CDS paaK ZP_04658488.1 HMPREF0908_0628 possible Phenylacetate--CoA ligase 15146 16069 1
CDS pyrF ZP_04658489.1 HMPREF0908_0629 orotidine-5'-phosphate decarboxylase 16071 16787 1
CDS pyrE ZP_04658490.1 HMPREF0908_0630 orotate phosphoribosyltransferase 16784 17362 1
CDS - ZP_04658491.1 HMPREF0908_0631 conserved hypothetical protein 17374 18084 1
CDS - ZP_04658492.1 HMPREF0908_0632 aluminum resistance protein 18156 19325 1
CDS fbpC1 ZP_04658493.1 HMPREF0908_0633 Fe(3+) ABC superfamily ATP binding cassette transporter, ABC protein 19576 20694 1
CDS - ZP_04658494.1 HMPREF0908_0634 Fe3+ ABC superfamily ATP binding cassette transporter, membrane protein 20687 22342 1
CDS - ZP_04658495.1 HMPREF0908_0635 Fe3+ ABC superfamily ATP binding cassette transporter, binding protein 22411 23451 1
CDS - ZP_04658496.1 HMPREF0908_0636 histidine kinase 23719 25449 1
CDS - ZP_04658497.1 HMPREF0908_0637 possible response regulator 25421 26203 1
CDS - ZP_04658498.1 HMPREF0908_0638 ribosomal protein S6 26291 26698 1
CDS - ZP_04658499.1 HMPREF0908_0639 single-strand binding protein 26731 27183 1
CDS - ZP_04658500.1 HMPREF0908_0640 ribosomal protein S18 27230 27463 1
CDS - ZP_04658501.1 HMPREF0908_0641 hypothetical protein 27525 27857 1
CDS - ZP_04658502.1 HMPREF0908_0642 possible metallophosphoesterase 27929 29176 -1
CDS - ZP_04658503.1 HMPREF0908_0643 SNARE associated Golgi protein superfamily protein 29173 29877 -1
CDS - ZP_04658504.1 HMPREF0908_0644 hypothetical protein 29919 30266 -1
CDS ctp55 ZP_04658505.1 HMPREF0908_0645 possible N-acetylmuramoyl-L-alanine amidase 30300 31142 -1
CDS - ZP_04658506.1 HMPREF0908_0646 ABC superfamily ATP binding cassette transporter domain protein 31139 32896 -1
CDS - ZP_04658507.1 HMPREF0908_0647 MotA/TolQ/ExbB proton channel 33014 33679 1
CDS - ZP_04658508.1 HMPREF0908_0648 biopolymer transport protein ExbD/TolR 33676 34074 1
CDS - ZP_04658509.1 HMPREF0908_0649 conserved hypothetical protein 34151 35848 -1
CDS - ZP_04658510.1 HMPREF0908_0650 hypothetical protein 35893 36171 -1
CDS - ZP_04658511.1 HMPREF0908_0651 hypothetical protein 36210 36650 1
CDS mdh ZP_04658512.1 HMPREF0908_0652 malate dehydrogenase 36805 37755 1
tRNA - - HMPREF0908_t0011 tRNA-Lys 37896 37971 1
CDS surE ZP_04658513.1 HMPREF0908_0653 acid phosphatase SurE 38051 38812 1
CDS - ZP_04658514.1 HMPREF0908_0654 siroheme synthase 38953 39615 1
CDS hemA ZP_04658515.1 HMPREF0908_0655 glutamyl-tRNA reductase 39569 40930 1
CDS hemC ZP_04658516.1 HMPREF0908_0656 hydroxymethylbilane synthase 40914 41783 1
CDS hemD ZP_04658517.1 HMPREF0908_0657 possible uroporphyrinogen-III synthase 41780 43300 1
CDS hemB ZP_04658518.1 HMPREF0908_0658 Porphobilinogen synthase 43297 44268 1
CDS hemL2 ZP_04658519.1 HMPREF0908_0659 glutamate-1-semialdehyde 2,1-aminomutase 44281 45600 1
CDS spovB ZP_04658520.1 HMPREF0908_0660 stage V sporulation protein B 45766 47403 1
CDS - ZP_04658521.1 HMPREF0908_0661 possible diacylglycerol kinase 47400 48284 1
CDS - ZP_04658522.1 HMPREF0908_0662 protein of hypothetical function DUF815 48296 49564 -1
CDS - ZP_04658523.1 HMPREF0908_0663 protein of hypothetical function DUF795 49561 50814 -1
CDS - ZP_04658524.1 HMPREF0908_0664 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 51113 52213 1
CDS - ZP_04658525.1 HMPREF0908_0665 hypothetical protein 52242 53291 1
CDS - ZP_04658526.1 HMPREF0908_0666 hypothetical protein 53303 54184 1
CDS - ZP_04658527.1 HMPREF0908_0667 hypothetical protein 54198 54599 1
CDS - ZP_04658528.1 HMPREF0908_0668 ABC superfamily ATP binding cassette transporter, substrate-binding protein 54596 55537 1
CDS speA1 ZP_04658529.1 HMPREF0908_0669 arginine decarboxylase 55537 56991 1
CDS speE ZP_04658530.1 HMPREF0908_0670 spermidine synthase 56995 57855 1
CDS speB ZP_04658531.1 HMPREF0908_0671 agmatinase 57836 58717 1
CDS - ZP_04658532.1 HMPREF0908_0672 glutamyl-tRNA amidotransferase subunit C 58850 59152 1
CDS amiB2 ZP_04658533.1 HMPREF0908_0673 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 59204 60631 1
CDS - ZP_04658534.1 HMPREF0908_0674 glutamyl-tRNA amidotransferase subunit B 60628 62067 1
CDS - ZP_04658535.1 HMPREF0908_0675 phosphatase 62123 62791 1
CDS - ZP_04658536.1 HMPREF0908_0676 TrmA family RNA methyltransferase 62788 64185 1
CDS - ZP_04658537.1 HMPREF0908_0677 hypothetical protein 64202 64780 1
CDS - ZP_04658538.1 HMPREF0908_0678 GTP-binding protein 64770 65678 1
CDS rnhB ZP_04658539.1 HMPREF0908_0679 ribonuclease HII 65705 66484 1
CDS - ZP_04658540.1 HMPREF0908_0680 conserved hypothetical protein 66474 68531 1
CDS - ZP_04658541.1 HMPREF0908_0681 flagellar biosynthesis protein FlhB 68627 68938 1
CDS - ZP_04658542.1 HMPREF0908_0682 endonuclease 68935 69291 1
CDS ppaC ZP_04658543.1 HMPREF0908_0683 possible inorganic diphosphatase 69373 71067 1
CDS - ZP_04658544.1 HMPREF0908_0684 ATP-dependent DNA helicase 71150 73390 1
CDS ligA ZP_04658545.1 HMPREF0908_0685 DNA ligase (NAD(+)) 73398 75431 1
CDS sbcD ZP_04658546.1 HMPREF0908_0686 exonuclease SbcD 75502 76647 1
CDS sbcC ZP_04658547.1 HMPREF0908_0687 exonuclease Sbcc 76644 79724 1
CDS - ZP_04658548.1 HMPREF0908_0688 ATP-dependent deoxyribonuclease subunit B 79721 83317 1
CDS - ZP_04658549.1 HMPREF0908_0689 ATP-dependent deoxyribonuclease subunit A 83271 87053 1
CDS - ZP_04658550.1 HMPREF0908_0690 HIT family histidine triad protein 87120 87467 1
CDS - ZP_04658551.1 HMPREF0908_0691 hypothetical protein 87608 87886 1
CDS - ZP_04658552.1 HMPREF0908_0692 deaminase 87876 88334 1
CDS fba ZP_04658553.1 HMPREF0908_0693 fructose-bisphosphate aldolase 88432 89430 -1
CDS - ZP_04658554.1 HMPREF0908_0694 chromosome segregation protein Smc 89575 93135 1
CDS ftsY ZP_04658555.1 HMPREF0908_0695 signal recognition particle-docking protein FtsY 93165 94097 1
CDS nudF ZP_04658556.1 HMPREF0908_0696 ADP-ribose diphosphatase 94135 94686 1
CDS - ZP_04658557.1 HMPREF0908_0697 M50 family membrane metalloprotease 94696 95325 1
CDS - ZP_04658558.1 HMPREF0908_0698 segregation and condensation protein A 95334 96062 1
CDS - ZP_04658559.1 HMPREF0908_0699 segregation and condensation protein B 96049 96642 1
CDS - ZP_04658560.1 HMPREF0908_0700 peptidase U32 96665 99154 1
CDS - ZP_04658561.1 HMPREF0908_0701 recombination and DNA strand exchange inhibitor protein MutS2 99213 101570 1
CDS - ZP_04658562.1 HMPREF0908_0702 penicillin-binding protein 2C 101695 103785 1
CDS tyrS ZP_04658563.1 HMPREF0908_0703 tyrosine--tRNA ligase 103804 105006 1
CDS - ZP_04658564.1 HMPREF0908_0704 protein of hypothetical function DUF28 105039 105767 1
CDS ruvC ZP_04658565.1 HMPREF0908_0705 crossover junction endodeoxyribonuclease 105937 106317 1
CDS - ZP_04658566.1 HMPREF0908_0706 crossover junction endodeoxyribonuclease 106391 106990 1