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Selenomonas flueggei ATCC 43531, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04659630.1 HMPREF0908_1770 conserved hypothetical protein 1 198 -1
CDS - ZP_04659631.1 HMPREF0908_1771 conserved hypothetical protein 191 709 -1
CDS - ZP_04659632.1 HMPREF0908_1772 thioesterase superfamily protein 753 1187 -1
CDS murI ZP_04659633.1 HMPREF0908_1773 glutamate racemase 1199 1987 -1
CDS - ZP_04659634.1 HMPREF0908_1774 hypothetical protein 2094 2351 1
CDS - ZP_04659635.1 HMPREF0908_1775 LIVCS family branched chain amino acid:cation symporter 2531 3883 1
tRNA - - HMPREF0908_t0048 tRNA-Ser 3933 4021 1
CDS pyrR ZP_04659636.1 HMPREF0908_1776 uracil phosphoribosyltransferase 4138 4686 -1
CDS - ZP_04659637.1 HMPREF0908_1777 pseudouridylate synthase 4691 5590 -1
CDS lspA ZP_04659638.1 HMPREF0908_1778 signal peptidase II 5587 6045 -1
CDS - ZP_04659639.1 HMPREF0908_1779 cell-division initiation protein 6051 6632 -1
CDS - ZP_04659640.1 HMPREF0908_1780 ribosomal protein S4e 6629 7423 -1
CDS proC1 ZP_04659641.1 HMPREF0908_1781 pyrroline-5-carboxylate reductase 7447 8262 -1
CDS - ZP_04659642.1 HMPREF0908_1782 protein of hypothetical function DUF552 8271 8771 -1
CDS - ZP_04659643.1 HMPREF0908_1783 TIM-barrel fold protein 8778 9482 -1
CDS - ZP_04659644.1 HMPREF0908_1784 protein of hypothetical function DUF152 9486 10301 -1
CDS - ZP_04659645.1 HMPREF0908_1785 radical SAM domain protein 10298 11923 -1
CDS - ZP_04659646.1 HMPREF0908_1786 NrdR family transcriptional regulator 12071 12535 -1
CDS - ZP_04659647.1 HMPREF0908_1787 helix-turn-helix domain protein 12590 13438 -1
CDS iscS ZP_04659648.1 HMPREF0908_1788 cysteine desulfurase 13520 14659 -1
CDS - ZP_04659649.1 HMPREF0908_1789 transcriptional regulator 14656 15105 -1
CDS dut ZP_04659650.1 HMPREF0908_1790 dUTP diphosphatase 15210 15662 -1
CDS - ZP_04659651.1 HMPREF0908_1791 RNA chaperone Hfq 15731 15964 -1
CDS miaA ZP_04659652.1 HMPREF0908_1792 tRNA isopentenyltransferase 15954 16919 -1
CDS - ZP_04659653.1 HMPREF0908_1793 metal-dependent hydrolase 16919 17605 -1
CDS ileS ZP_04659654.1 HMPREF0908_1794 isoleucine--tRNA ligase 17727 20876 -1
CDS - ZP_04659655.1 HMPREF0908_1795 chaperone DnaJ protein 21019 22167 -1
CDS - ZP_04659656.1 HMPREF0908_1796 chaperone DnaK protein 22177 24042 -1
CDS grpE ZP_04659657.1 HMPREF0908_1797 protein grpE 24079 24669 -1
CDS - ZP_04659658.1 HMPREF0908_1798 heat shock protein transcription repressor 24663 25697 -1
CDS - ZP_04659659.1 HMPREF0908_1799 hypothetical protein 25799 25969 1
CDS upp ZP_04659660.1 HMPREF0908_1800 uracil phosphoribosyltransferase 26030 26686 -1
CDS glyA2 ZP_04659661.1 HMPREF0908_1801 glycine hydroxymethyltransferase 26720 27982 -1
CDS rpiB2 ZP_04659662.1 HMPREF0908_1802 ribose-5-phosphate isomerase 27995 28516 -1
CDS - ZP_04659663.1 HMPREF0908_1803 cation ABC superfamily ATP binding cassette transporter, membrane protein 28513 29355 -1
CDS - ZP_04659664.1 HMPREF0908_1804 ABC superfamily ATP binding cassette transporter, ABC protein 29346 30173 -1
CDS - ZP_04659665.1 HMPREF0908_1805 ABC superfamily ATP binding cassette transporter 30195 30932 -1
CDS - ZP_04659666.1 HMPREF0908_1806 ABC superfamily ATP binding cassette transporter, ABC protein 30932 31825 -1
CDS - ZP_04659667.1 HMPREF0908_1807 possible dehydrogenase 31822 32811 -1
CDS cbiK ZP_04659668.1 HMPREF0908_1808 possible Sirohydrochlorin cobaltochelatase 32940 34034 -1
CDS - ZP_04659669.1 HMPREF0908_1809 von Willebrand factor type A domain protein 34112 34855 -1
CDS - ZP_04659670.1 HMPREF0908_1810 DNA-directed RNA polymerase sigma subunit SigH 35133 35933 -1
CDS - ZP_04659671.1 HMPREF0908_1811 ribosomal protein L7/L12 36297 36668 -1
CDS - ZP_04659672.1 HMPREF0908_1812 ribosomal protein L10 36714 37250 -1
CDS - ZP_04659673.1 HMPREF0908_1813 hypothetical protein 37239 37409 1
CDS - ZP_04659674.1 HMPREF0908_1814 ribosomal protein L1 37549 38232 -1
CDS - ZP_04659675.1 HMPREF0908_1815 ribosomal protein L11 38291 38716 -1
CDS - ZP_04659676.1 HMPREF0908_1816 transcriptional antiterminator NusG 38750 39301 -1
CDS - ZP_04659677.1 HMPREF0908_1817 hypothetical protein 39316 39501 -1
CDS - ZP_04659678.1 HMPREF0908_1818 ribosomal protein L33 39512 39661 -1
tRNA - - HMPREF0908_t0049 tRNA-Met 39821 39897 -1
tRNA - - HMPREF0908_t0050 tRNA-Thr 39904 39979 -1
tRNA - - HMPREF0908_t0051 tRNA-Met 39989 40064 -1
tRNA - - HMPREF0908_t0052 tRNA-Tyr 40072 40157 -1
tRNA - - HMPREF0908_t0053 tRNA-Met 40173 40248 -1
CDS - ZP_04659679.1 HMPREF0908_1819 6-phosphofructokinase 40410 41678 -1
CDS - ZP_04659680.1 HMPREF0908_1820 conserved hypothetical protein 41783 42490 -1
CDS - ZP_04659681.1 HMPREF0908_1821 DEAD/DEAH box helicase domain protein 42528 43808 -1
CDS map ZP_04659682.1 HMPREF0908_1822 methionyl aminopeptidase 43805 44695 -1
CDS - ZP_04659683.1 HMPREF0908_1823 polysaccharide deacetylase 44841 45680 1
CDS - ZP_04659684.1 HMPREF0908_1824 hypothetical protein 46055 46252 1
CDS sacA ZP_04659685.1 HMPREF0908_1825 possible beta-fructofuranosidase 46350 47810 -1
CDS scrA ZP_04659686.1 HMPREF0908_1826 protein-N(pi)-phosphohistidine--sugar phosphotransferase 47807 49675 -1
CDS - ZP_04659687.1 HMPREF0908_1827 possible N(pi)-phosphohistidine--sugar phosphotransferase 49875 50237 1
CDS - ZP_04659688.1 HMPREF0908_1828 general secretion pathway protein F 50526 51734 -1
CDS - ZP_04659689.1 HMPREF0908_1829 Tfp pilus assembly protein PilT 51731 52729 -1
CDS - ZP_04659690.1 HMPREF0908_1830 possible type IV pilus assembly protein 52722 53966 -1
CDS truA ZP_04659691.1 HMPREF0908_1831 tRNA-pseudouridine synthase I 53986 54756 -1
CDS - ZP_04659692.1 HMPREF0908_1832 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein 54767 55597 -1
CDS - ZP_04659693.1 HMPREF0908_1833 possible metal-dependent hydrolase 55716 56966 1
CDS - ZP_04659694.1 HMPREF0908_1834 metal dependent phosphohydrolase 57040 58059 -1
CDS - ZP_04659695.1 HMPREF0908_1835 amino acid ABC superfamily ATP binding cassette transporter, binding protein 58285 59091 1
CDS - ZP_04659696.1 HMPREF0908_1836 amino acid ABC superfamily ATP binding cassette transporter, membrane protein 59150 59794 1
CDS - ZP_04659697.1 HMPREF0908_1837 ABC superfamily ATP binding cassette transporter, ABC protein 59775 60557 1
CDS - ZP_04659698.1 HMPREF0908_1838 MATE family multi antimicrobial extrusion protein 60656 61996 -1
CDS - ZP_04659699.1 HMPREF0908_1839 protein of hypothetical function DUF218 61993 62754 -1
CDS - ZP_04659700.1 HMPREF0908_1840 hypothetical protein 63236 63424 1
CDS - ZP_04659701.1 HMPREF0908_1841 hypothetical protein 63663 64454 1
CDS - ZP_04659702.1 HMPREF0908_1842 conserved hypothetical protein 64480 64941 1