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Shewanella sp. MR-4, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaA YP_732140.1 Shewmr4_0001 chromosomal replication initiation protein 79 1461 1
CDS - YP_732141.1 Shewmr4_0002 DNA polymerase III, beta subunit 1482 2582 1
CDS recF YP_732142.1 Shewmr4_0003 recombination protein F 2744 3826 1
CDS - YP_732143.1 Shewmr4_0004 DNA gyrase subunit B 3843 6260 1
CDS - YP_732144.1 Shewmr4_0005 glutathione S-transferase domain-containing protein 6341 6997 -1
CDS - YP_732145.1 Shewmr4_0006 LysR family transcriptional regulator 7124 7972 1
CDS - YP_732146.1 Shewmr4_0007 putative signal transduction protein 8128 9171 1
CDS glyS YP_732147.1 Shewmr4_0008 glycyl-tRNA synthetase subunit beta 9235 11301 -1
CDS glyQ YP_732148.1 Shewmr4_0009 glycyl-tRNA synthetase subunit alpha 11311 12216 -1
CDS - YP_732149.1 Shewmr4_0010 DNA-3-methyladenine glycosylase I 12335 12907 1
CDS - YP_732150.1 Shewmr4_0011 amidohydrolase 12996 16184 -1
CDS - YP_732151.1 Shewmr4_0012 hypothetical protein 16381 16818 -1
CDS - YP_732152.1 Shewmr4_0013 sulfur transfer protein SirA 16854 17099 -1
CDS - YP_732153.1 Shewmr4_0014 diguanylate cyclase 17258 18451 -1
CDS - YP_732154.1 Shewmr4_0015 integrase catalytic subunit 18661 19464 -1
CDS - YP_732155.1 Shewmr4_0016 transposase 19494 19889 -1
CDS fadA YP_732156.1 Shewmr4_0017 3-ketoacyl-CoA thiolase 19987 21150 -1
CDS fadB YP_732157.1 Shewmr4_0018 multifunctional fatty acid oxidation complex subunit alpha 21173 23323 -1
CDS - YP_732158.1 Shewmr4_0019 proline dipeptidase 23767 25086 1
CDS - YP_732159.1 Shewmr4_0020 hypothetical protein 25102 25716 1
CDS - YP_732160.1 Shewmr4_0021 TrkH family potassium uptake protein 25794 27251 1
CDS - YP_732161.1 Shewmr4_0022 protoporphyrinogen oxidase 27253 27777 1
CDS - YP_732162.1 Shewmr4_0023 ArsR family transcriptional regulator 27840 28148 -1
CDS - YP_732163.1 Shewmr4_0024 protoporphyrinogen oxidase 28348 28902 1
CDS - YP_732164.1 Shewmr4_0025 TrkH family potassium uptake protein 28949 30391 -1
CDS trkA YP_732165.1 Shewmr4_0026 potassium transporter peripheral membrane component 30403 31812 -1
CDS - YP_732166.1 Shewmr4_0027 sun protein 31828 33117 -1
CDS - YP_732167.1 Shewmr4_0028 methionyl-tRNA formyltransferase 33117 34073 -1
CDS def YP_732168.1 Shewmr4_0029 peptide deformylase 34089 34595 -1
CDS - YP_732169.1 Shewmr4_0030 peptidoglycan-binding LysM 34721 35845 1
CDS - YP_732170.1 Shewmr4_0031 DNA protecting protein DprA 35929 36945 1
CDS - YP_732171.1 Shewmr4_0032 hypothetical protein 36948 37424 1
CDS - YP_732172.1 Shewmr4_0033 DNA topoisomerase type IA Zn finger domain-containing protein 37547 38110 1
CDS - YP_732173.1 Shewmr4_0034 translation factor SUA5 38249 38815 1
CDS - YP_732174.1 Shewmr4_0035 coproporphyrinogen III oxidase 38845 39753 1
CDS - YP_732175.1 Shewmr4_0036 globin 39785 40222 -1
CDS aroE YP_732176.1 Shewmr4_0037 shikimate 5-dehydrogenase 40394 41272 1
CDS - YP_732177.1 Shewmr4_0038 hypothetical protein 41293 41568 1
CDS - YP_732178.1 Shewmr4_0039 carbonic anhydrase 41625 42173 -1
rRNA - - Shewmr4_R0001 16S ribosomal RNA 42695 44229 1
rRNA - - Shewmr4_R0002 23S ribosomal RNA 44542 47434 1
rRNA - - Shewmr4_R0003 5S ribosomal RNA 47656 47771 1
tRNA - - Shewmr4_R0004 tRNA-Asp 47808 47884 1
CDS - YP_732179.1 Shewmr4_0040 hypothetical protein 48200 48454 1
CDS - YP_732180.1 Shewmr4_0041 BadM/Rrf2 family transcriptional regulator 48476 48931 1
CDS - YP_732181.1 Shewmr4_0042 protein of unknown function DUF610, YibQ 48906 49661 -1
CDS - YP_732182.1 Shewmr4_0043 C-terminal processing peptidase-3 49674 50879 -1
CDS - YP_732183.1 Shewmr4_0045 phosphoglyceromutase 52071 53615 -1
CDS - YP_732184.1 Shewmr4_0046 rhodanese domain-containing protein 53881 54315 1
CDS - YP_732185.1 Shewmr4_0047 preprotein translocase subunit SecB 54576 55061 1
CDS gpsA YP_732186.1 Shewmr4_0048 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 55066 56082 1
CDS - YP_732187.1 Shewmr4_0049 hypothetical protein 56321 57505 1
CDS - YP_732188.1 Shewmr4_0050 hypothetical protein 58053 59630 1
CDS - YP_732189.1 Shewmr4_0051 TrkH family potassium uptake protein 59838 61199 -1
CDS - YP_732190.1 Shewmr4_0052 TrkA domain-containing protein 61201 61899 -1
CDS - YP_732191.1 Shewmr4_0053 two component transcriptional regulator 61944 62633 -1
CDS - YP_732192.1 Shewmr4_0054 periplasmic sensor signal transduction histidine kinase 62634 63680 -1
CDS - YP_732193.1 Shewmr4_0055 pirin domain-containing protein 63908 64831 -1
CDS - YP_732194.1 Shewmr4_0056 signal transduction histidine kinase, LytS 65316 66989 1
CDS - YP_732195.1 Shewmr4_0057 response regulator receiver protein 66983 67714 1
CDS - YP_732196.1 Shewmr4_0058 major facilitator transporter 67822 69066 1
CDS - YP_732197.1 Shewmr4_0059 hypothetical protein 69156 69776 -1
CDS - YP_732198.1 Shewmr4_0060 hypothetical protein 70202 70939 1
CDS - YP_732199.1 Shewmr4_0061 NLP/P60 protein 71040 71519 1
CDS - YP_732200.1 Shewmr4_0062 major facilitator transporter 71544 72992 1
CDS - YP_732201.1 Shewmr4_0063 LacI family transcription regulator 73081 74109 1
CDS - YP_732202.1 Shewmr4_0064 sucrose phosphorylase 74168 75652 -1
CDS - YP_732203.1 Shewmr4_0065 major facilitator transporter 75909 77129 1
CDS - YP_732204.1 Shewmr4_0066 TonB-dependent receptor 77389 79785 1
CDS - YP_732205.1 Shewmr4_0067 ribokinase-like domain-containing protein 79878 80837 1
CDS mogA YP_732206.1 Shewmr4_0068 molybdenum cofactor biosynthesis protein 81043 81576 1
CDS - YP_732207.1 Shewmr4_0069 hypothetical protein 81610 81828 -1
CDS - YP_732208.1 Shewmr4_0070 transcriptional regulator 81980 83023 1
CDS - YP_732209.1 Shewmr4_0071 hypothetical protein 83027 83287 -1
CDS - YP_732210.1 Shewmr4_0072 transport protein, putative 83337 84476 -1
CDS - YP_732211.1 Shewmr4_0073 ABC transporter related 84565 85299 -1
CDS - YP_732212.1 Shewmr4_0074 TAP domain-containing protein 85302 86909 -1
CDS - YP_732213.1 Shewmr4_0075 GntR family transcriptional regulator 87002 87367 1
CDS - YP_732214.1 Shewmr4_0076 ABC transporter related 87414 88277 1
CDS - YP_732215.1 Shewmr4_0077 hypothetical protein 88274 89584 1
CDS - YP_732216.1 Shewmr4_0078 AMP-dependent synthetase and ligase 89713 91506 1
CDS - YP_732217.1 Shewmr4_0079 MORN repeat-containing protein 91647 94136 1
CDS - YP_732218.1 Shewmr4_0080 thioesterase superfamily protein 94244 94654 1
CDS - YP_732219.1 Shewmr4_0081 HPP family protein 94772 95320 1
CDS - YP_732220.1 Shewmr4_0082 hypothetical protein 95572 95979 -1
CDS - YP_732221.1 Shewmr4_0083 hypothetical protein 96029 96292 -1
CDS - YP_732222.1 Shewmr4_0084 thioesterase superfamily protein 96352 96816 -1
CDS - YP_732223.1 Shewmr4_0085 MerR family transcriptional regulator 96964 97317 1
CDS - YP_732224.1 Shewmr4_0086 NAD(P)H dehydrogenase (quinone) 97389 97967 1
CDS - YP_732225.1 Shewmr4_0087 glutathione-dependent formaldehyde-activating, GFA 97983 98378 1
CDS - YP_732226.1 Shewmr4_0088 MerR family transcriptional regulator 98382 98738 1
CDS - YP_732227.1 Shewmr4_0089 carboxymuconolactone decarboxylase 98922 99308 1
CDS - YP_732228.1 Shewmr4_0090 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 99360 100040 -1
CDS - YP_732229.1 Shewmr4_0091 hypothetical protein 100404 100838 1
CDS - YP_732230.1 Shewmr4_0092 hypothetical protein 100931 101944 1
CDS - YP_732231.1 Shewmr4_0093 hypothetical protein 102073 102804 1
CDS - YP_732232.1 Shewmr4_0094 hypothetical protein 102895 104802 -1
CDS - YP_732233.1 Shewmr4_0095 MarR family transcriptional regulator 105072 105500 1
CDS - YP_732234.1 Shewmr4_0096 FAD-binding 9, siderophore-interacting domain-containing protein 105536 106282 1
CDS - YP_732235.1 Shewmr4_0097 imidazolonepropionase 106986 108212 -1