• Summary page

Sequences

• gss2457T.assembly.10, whole genome shotgun sequence
• gss2457T.assembly.11, whole genome shotgun sequence
• gss2457T.assembly.12, whole genome shotgun sequence
• gss2457T.assembly.13, whole genome shotgun sequence
• gss2457T.assembly.14, whole genome shotgun sequence
• gss2457T.assembly.15, whole genome shotgun sequence
• gss2457T.assembly.16, whole genome shotgun sequence
• gss2457T.assembly.17, whole genome shotgun sequence
• gss2457T.assembly.18, whole genome shotgun sequence
• gss2457T.assembly.19, whole genome shotgun sequence
• gss2457T.assembly.1, whole genome shotgun sequence
• gss2457T.assembly.20, whole genome shotgun sequence
• gss2457T.assembly.21, whole genome shotgun sequence
• gss2457T.assembly.22, whole genome shotgun sequence
• gss2457T.assembly.23, whole genome shotgun sequence
• gss2457T.assembly.24, whole genome shotgun sequence
• gss2457T.assembly.25, whole genome shotgun sequence
• gss2457T.assembly.26, whole genome shotgun sequence
• gss2457T.assembly.27, whole genome shotgun sequence
• gss2457T.assembly.28, whole genome shotgun sequence
• gss2457T.assembly.29, whole genome shotgun sequence
• gss2457T.assembly.2, whole genome shotgun sequence
• gss2457T.assembly.30, whole genome shotgun sequence
• gss2457T.assembly.31, whole genome shotgun sequence
• gss2457T.assembly.32, whole genome shotgun sequence
• gss2457T.assembly.33, whole genome shotgun sequence
• gss2457T.assembly.34, whole genome shotgun sequence
• gss2457T.assembly.35, whole genome shotgun sequence
• gss2457T.assembly.36, whole genome shotgun sequence
• gss2457T.assembly.37, whole genome shotgun sequence
• gss2457T.assembly.38, whole genome shotgun sequence
• gss2457T.assembly.39, whole genome shotgun sequence
• gss2457T.assembly.3, whole genome shotgun sequence
• gss2457T.assembly.40, whole genome shotgun sequence
• gss2457T.assembly.41, whole genome shotgun sequence
• gss2457T.assembly.42, whole genome shotgun sequence
• gss2457T.assembly.43, whole genome shotgun sequence
• gss2457T.assembly.44, whole genome shotgun sequence
• gss2457T.assembly.45, whole genome shotgun sequence
• gss2457T.assembly.46, whole genome shotgun sequence
• gss2457T.assembly.47, whole genome shotgun sequence
• gss2457T.assembly.48, whole genome shotgun sequence
• gss2457T.assembly.49, whole genome shotgun sequence
• gss2457T.assembly.4, whole genome shotgun sequence
• gss2457T.assembly.50, whole genome shotgun sequence
• gss2457T.assembly.51, whole genome shotgun sequence
• gss2457T.assembly.52, whole genome shotgun sequence
• gss2457T.assembly.53, whole genome shotgun sequence
• gss2457T.assembly.54, whole genome shotgun sequence
• gss2457T.assembly.55, whole genome shotgun sequence
• gss2457T.assembly.56, whole genome shotgun sequence
• gss2457T.assembly.57, whole genome shotgun sequence
• gss2457T.assembly.58, whole genome shotgun sequence
• gss2457T.assembly.59, whole genome shotgun sequence
• gss2457T.assembly.5, whole genome shotgun sequence
• gss2457T.assembly.60, whole genome shotgun sequence
• gss2457T.assembly.61, whole genome shotgun sequence
• gss2457T.assembly.62, whole genome shotgun sequence
• gss2457T.assembly.63, whole genome shotgun sequence
• gss2457T.assembly.64, whole genome shotgun sequence
• gss2457T.assembly.65, whole genome shotgun sequence
• gss2457T.assembly.66, whole genome shotgun sequence
• gss2457T.assembly.67, whole genome shotgun sequence
• gss2457T.assembly.68, whole genome shotgun sequence
• gss2457T.assembly.69, whole genome shotgun sequence
• gss2457T.assembly.6, whole genome shotgun sequence
• gss2457T.assembly.70, whole genome shotgun sequence
• gss2457T.assembly.71, whole genome shotgun sequence
• gss2457T.assembly.7, whole genome shotgun sequence
• gss2457T.assembly.8, whole genome shotgun sequence
• gss2457T.assembly.9, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Proteobacteria
» Gammaproteobacteria
» Enterobacteriales
» Enterobacteriaceae
» Shigella
» Shigella flexneri
» Shigella flexneri 2a

Shigella flexneri 2a str. 2457T

SF2457T_1170 - IS222, transposase ORFA

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve SF2457T_1170 nucleotide sequence in FASTA format

Retrieve SF2457T_1170 protein sequence in FASTA format

Retrieve SF2457T_1170 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using SF2457T_1170 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Shigella Shigella flexneri Shigella flexneri 2a )

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Annotation

Product:

IS222, transposase ORFA

GenBank ID: EFS14770.1

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