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Shigella flexneri 2a str. 2457T gss2457T.assembly.43, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - EFS13782.1 SF2457T_2010 IS2 transposase orfA 861 998 -1
CDS - EFS13783.1 SF2457T_2011 IS2 transposase orfA 995 1222 -1
CDS - EFS13784.1 SF2457T_2012 hypothetical protein 1586 1798 -1
CDS - EFS13785.1 SF2457T_2013 transposase family protein 1949 2248 1
CDS - EFS13786.1 SF2457T_2014 transposase insF for insertion sequence IS3A/B/C/D/E/fA 2245 3099 1
CDS - EFS13787.1 SF2457T_2015 ycgL domain protein 3490 3783 1
CDS - EFS13788.1 SF2457T_2016 fumarylacetoacetate (FAA) hydrolase family protein 3855 4514 1
CDS - EFS13789.1 SF2457T_2017 hypothetical protein 4606 5052 1
CDS - EFS13790.1 SF2457T_2018 hemolysin E, chromosomal domain protein 5259 5540 -1
CDS - EFS13791.1 SF2457T_2019 hemolysin E, chromosomal domain protein 5818 6159 -1
CDS - EFS13792.1 SF2457T_2020 UmuD protein 6532 6951 1
CDS - EFS13793.1 SF2457T_2021 protein umuC 6951 8219 1
CDS - EFS13794.1 SF2457T_2022 oxido-reductase 8265 8795 -1
CDS nhaB EFS13795.1 SF2457T_2023 na+/H+ antiporter NhaB 8941 10482 -1
CDS fadR EFS13796.1 SF2457T_2024 fatty acid metabolism transcriptional regulator FadR 10703 11422 1
CDS - EFS13797.1 SF2457T_2025 spoVR like family protein 11474 12967 -1
CDS - EFS13798.1 SF2457T_2026 FAD dependent oxidoreductase family protein 13363 14634 1
CDS alr EFS13799.1 SF2457T_2027 alanine racemase 14644 15714 1
CDS - EFS13800.1 SF2457T_2028 hypothetical protein 15882 16109 -1
CDS - EFS13801.1 SF2457T_2029 leucine Rich Repeat family protein 16146 17180 -1
CDS - EFS13802.1 SF2457T_2030 hypothetical protein 17193 17390 1
CDS cvrA EFS13803.1 SF2457T_2031 sodium/hydrogen exchanger family protein 17907 19643 -1
CDS - EFS13804.1 SF2457T_2032 muramoyltetrapeptide carboxypeptidase 19738 20652 -1
CDS - EFS13805.1 SF2457T_2033 endotype membrane-bound lytic murein transglycosylase A 20860 21363 1
CDS - EFS13806.1 SF2457T_2034 pilZ domain protein 21365 22099 -1
CDS - EFS13807.1 SF2457T_2035 transglycosylase associated family protein 22300 22554 1
CDS - EFS13808.1 SF2457T_2036 TonB dependent receptor protein 22604 24064 -1
CDS - EFS13809.1 SF2457T_2037 modD protein 24584 25438 -1
CDS - EFS13810.1 SF2457T_2038 methyltransferase domain protein 25438 26247 -1
CDS - EFS13811.1 SF2457T_2039 ABC transporter family protein 26257 27015 -1
CDS - EFS13812.1 SF2457T_2040 FecCD transport family protein 27012 27968 -1
CDS - EFS13813.1 SF2457T_2041 periplasmic binding family protein 27992 29014 -1
CDS - EFS13814.1 SF2457T_2042 insertion element IS1 1/5/6 protein insB 29727 30230 -1
CDS - EFS13815.1 SF2457T_2043 IS600 ORF2 domain protein 30305 30493 1
CDS - EFS13816.1 SF2457T_2044 uncharacterized protein ycgY 30858 31145 1
CDS - EFS13817.1 SF2457T_2045 trehalase family protein 31376 33073 -1
CDS - EFS13818.1 SF2457T_2046 PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM 33393 34736 -1
CDS - EFS13819.1 SF2457T_2047 dihydroxyacetone kinase, L subunit 34822 35454 -1
CDS dhaK EFS13820.1 SF2457T_2048 dihydroxyacetone kinase, DhaK subunit 35465 36535 -1
CDS - EFS13821.1 SF2457T_2049 PTS-dependent dihydroxyacetone kinase operon regulatory protein 36883 38682 1
CDS - EFS13822.1 SF2457T_2050 uncharacterized protein ycgV 38782 41649 -1
CDS - EFS13823.1 SF2457T_2051 GTP-dependent nucleic acid-binding protein engD 42493 43584 -1
CDS pth EFS13824.1 SF2457T_2052 peptidyl-tRNA hydrolase 43701 44285 -1
CDS - EFS13825.1 SF2457T_2053 inner membrane protein 44563 44841 1
CDS sulP EFS13826.1 SF2457T_2054 sulfate permease family protein 44896 46551 -1
CDS prs EFS13827.1 SF2457T_2055 ribose-phosphate pyrophosphokinase 46700 47647 -1
CDS ispE EFS13828.1 SF2457T_2056 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 47798 48649 -1
CDS lolB EFS13829.1 SF2457T_2057 outer membrane lipoprotein LolB 48649 49272 -1
CDS hemA EFS13830.1 SF2457T_2058 glutamyl-tRNA reductase 49486 50742 1
CDS prfA EFS13831.1 SF2457T_2059 peptide chain release factor 1 50784 51866 1
CDS hemK EFS13832.1 SF2457T_2060 protein-(glutamine-N5) methyltransferase, release factor-specific 51866 52699 1
CDS - EFS13833.1 SF2457T_2061 invasion gene expression regulator, SirB family protein 52696 53088 1
CDS - EFS13834.1 SF2457T_2062 protein sirB1 53092 53901 1
CDS kdsA EFS13835.1 SF2457T_2063 3-deoxy-8-phosphooctulonate synthase 53937 54791 1
CDS chaA EFS13836.1 SF2457T_2065 calcium/proton antiporter 55452 56552 -1
CDS - EFS13837.1 SF2457T_2066 chaB family protein 56822 57052 1
CDS - EFS13838.1 SF2457T_2067 cation transport protein chaC 57210 57905 1
CDS - EFS13839.1 SF2457T_2068 dsrE/DsrF-like family protein 57949 58302 -1
CDS - EFS13840.1 SF2457T_2069 uncharacterized protein ychO 58628 59881 1
CDS - EFS13841.1 SF2457T_2070 response regulator 59882 60532 -1
CDS - EFS13842.1 SF2457T_2071 HAMP domain protein 60525 62321 -1
CDS - EFS13843.1 SF2457T_2072 hypothetical protein 62347 62565 1
CDS - EFS13844.1 SF2457T_2073 nitrite extrusion protein 62660 64051 1
CDS - EFS13845.1 SF2457T_2074 nitrate reductase, alpha subunit 64444 68187 1
CDS narH EFS13846.1 SF2457T_2075 nitrate reductase, beta subunit 68184 69722 1
CDS narJ EFS13847.1 SF2457T_2076 nitrate reductase molybdenum cofactor assembly chaperone 69731 70429 1
CDS narI EFS13848.1 SF2457T_2077 respiratory nitrate reductase, gamma subunit 70429 71106 1
tRNA - - SF2457T_2079 tRNA-Tyr 71646 71730 -1
CDS purU EFS13849.1 SF2457T_2080 formyltetrahydrofolate deformylase 71890 72732 -1
CDS - EFS13850.1 SF2457T_2081 SEC-C motif family protein 72782 73180 -1
CDS - EFS13851.1 SF2457T_2082 patatin-like phospholipase family protein 73353 74258 1
CDS - EFS13852.1 SF2457T_2083 response regulator 74350 75363 1
CDS galU EFS13853.1 SF2457T_2084 UTP-glucose-1-phosphate uridylyltransferase 75565 76473 1
CDS - EFS13854.1 SF2457T_2085 DNA-binding protein H-NS 76617 77030 -1
CDS - EFS13855.1 SF2457T_2086 thymidine kinase 77635 78252 1
CDS - EFS13856.1 SF2457T_2087 putative transposase 78538 79176 -1
CDS - EFS13857.1 SF2457T_2088 putative transposase 79350 79865 -1
CDS - EFS13858.1 SF2457T_2089 aldehyde-alcohol dehydrogenase 79991 82666 -1
CDS - EFS13859.1 SF2457T_2090 marC family integral membrane family protein 83143 83790 1
CDS - EFS13860.1 SF2457T_2091 hypothetical protein 83948 84109 -1
CDS - EFS13861.1 SF2457T_2092 insertion element IS1 1/5/6 protein insB 84157 84660 -1
CDS - EFS13862.1 SF2457T_2093 IS150 ORF1 domain protein 84735 84950 1
CDS - EFS13863.1 SF2457T_2094 periplasmic oligopeptide-binding protein 85305 86936 1
CDS - EFS13864.1 SF2457T_2095 oligopeptide transport system permease protein oppB 87022 87942 1
CDS - EFS13865.1 SF2457T_2096 oligopeptide transport system permease protein oppC 87957 88865 1
CDS - EFS13866.1 SF2457T_2097 oligopeptide transport ATP-binding protein oppD 88877 89890 1
CDS - EFS13867.1 SF2457T_2098 oligopeptide transport ATP-binding protein oppF 89887 90891 1
CDS - EFS13868.1 SF2457T_2099 hypothetical protein 90944 91273 -1
CDS - EFS13869.1 SF2457T_2100 phospholipase family protein 91308 92768 -1
CDS - EFS13870.1 SF2457T_2101 putative potassium channel protein 93139 94392 -1
CDS - EFS13871.1 SF2457T_2102 transposase family protein 94755 95057 1
CDS - EFS13872.1 SF2457T_2103 integrase core domain protein 95198 95884 1
CDS - EFS13873.1 SF2457T_2104 YCII-related domain protein 95932 96228 -1
CDS - EFS13874.1 SF2457T_2105 protein tonB 96437 97171 1
CDS - EFS13875.1 SF2457T_2106 thioesterase superfamily protein 97211 97555 -1
CDS ispZ EFS13876.1 SF2457T_2107 intracellular septation protein A 97714 98253 -1
CDS - EFS13877.1 SF2457T_2108 hypothetical protein 98283 99026 -1
CDS - EFS13878.1 SF2457T_2109 outer membrane protein W 99383 100021 1
CDS - EFS13879.1 SF2457T_2110 hypothetical protein 100081 100587 -1
CDS - EFS13880.1 SF2457T_2111 hypothetical protein 100633 101133 -1