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Shigella flexneri 2a str. 2457T gss2457T.assembly.51, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - SF2457T_2760 5S ribosomal RNA 326 440 1
CDS murB EFS13066.1 SF2457T_2761 UDP-N-acetylenolpyruvoylglucosamine reductase 568 1596 1
CDS - EFS13067.1 SF2457T_2762 bifunctional protein birA 1593 2558 1
CDS coaA EFS13068.1 SF2457T_2763 pantothenate kinase 2587 3537 -1
CDS - EFS13069.1 SF2457T_2764 hypothetical protein 3586 3714 1
tRNA - - SF2457T_2765 tRNA-Thr 3899 3974 1
tRNA - - SF2457T_2766 tRNA-Tyr 3983 4067 1
tRNA - - SF2457T_2767 tRNA-Gly 4184 4258 1
tRNA - - SF2457T_2768 tRNA-Thr 4265 4340 1
CDS tuf EFS13070.1 SF2457T_2769 translation elongation factor Tu 4455 5639 1
CDS secE EFS13071.1 SF2457T_2770 preprotein translocase, SecE subunit 5869 6252 1
CDS nusG EFS13072.1 SF2457T_2771 transcription termination/antitermination factor NusG 6254 6799 1
CDS rplK EFS13073.1 SF2457T_2772 ribosomal protein L11 7006 7386 1
CDS rplA EFS13074.1 SF2457T_2773 ribosomal protein L1 7390 8094 1
CDS - EFS13075.1 SF2457T_2774 ribosomal L10 family protein 8507 9004 1
CDS rplL EFS13076.1 SF2457T_2775 ribosomal protein L7/L12 9071 9436 1
CDS rpoB EFS13077.1 SF2457T_2776 DNA-directed RNA polymerase, beta subunit 9756 13784 1
CDS rpoC EFS13078.1 SF2457T_2777 DNA-directed RNA polymerase, beta' subunit 13861 18084 1
CDS thiH EFS13079.1 SF2457T_2778 thiazole biosynthesis protein ThiH 18326 19459 -1
CDS - EFS13080.1 SF2457T_2779 thiazole biosynthesis protein thiG 19456 20226 -1
CDS thiS EFS13081.1 SF2457T_2780 thiamine biosynthesis protein ThiS 20228 20428 -1
CDS thiF EFS13082.1 SF2457T_2781 thiazole biosynthesis adenylyltransferase ThiF 20412 21167 -1
CDS thiE EFS13083.1 SF2457T_2782 thiamine-phosphate pyrophosphorylase 21160 21795 -1
CDS thiC EFS13084.1 SF2457T_2783 thiamine biosynthesis protein ThiC 21795 23690 -1
CDS - EFS13085.1 SF2457T_2784 regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ family protein 23924 24400 -1
CDS - EFS13086.1 SF2457T_2785 NUDIX domain protein 24495 25268 1
CDS hemE EFS13087.1 SF2457T_2786 uroporphyrinogen decarboxylase 25308 26372 1
CDS - EFS13088.1 SF2457T_2787 endonuclease V 26529 27200 1
CDS - EFS13089.1 SF2457T_2788 hypothetical protein 27243 27833 1
CDS - EFS13090.1 SF2457T_2789 DNA-binding protein HU-alpha 28020 28292 1
CDS - EFS13091.1 SF2457T_2790 hypothetical protein 28365 29000 1
CDS - EFS13092.1 SF2457T_2791 zinc resistance protein 29002 29427 -1
CDS - EFS13093.1 SF2457T_2792 hypothetical protein 29430 29558 -1
CDS - EFS13094.1 SF2457T_2793 sensor protein zraS 29665 31041 1
CDS - EFS13095.1 SF2457T_2794 transcriptional regulatory protein zraR 31038 32363 1
CDS purD EFS13096.1 SF2457T_2795 phosphoribosylamine--glycine ligase 32360 33649 -1
CDS purH EFS13097.1 SF2457T_2796 bifunctional purine biosynthesis protein PurH 33661 35250 -1
rRNA - - SF2457T_2798 16S ribosomal RNA 35872 37401 1
tRNA - - SF2457T_2800 tRNA-Glu 37492 37567 1
rRNA - - SF2457T_2801 23S ribosomal RNA 37763 40664 1
rRNA - - SF2457T_2804 5S ribosomal RNA 40762 40876 1
CDS - EFS13098.1 SF2457T_2805 acetyltransferase, GNAT family 40990 41433 -1
CDS metA EFS13099.1 SF2457T_2806 homoserine O-succinyltransferase 41590 42519 1
CDS - EFS13100.1 SF2457T_2807 malate synthase A domain protein 42788 43444 1
CDS - EFS13101.1 SF2457T_2808 malate synthase A domain protein 43526 44389 1
CDS aceA EFS13102.1 SF2457T_2809 isocitrate lyase 44419 45723 1
CDS - EFS13103.1 SF2457T_2810 isocitrate dehydrogenase kinase/phosphatase 45907 47223 1
CDS - EFS13104.1 SF2457T_2811 isocitrate dehydrogenase kinase/phosphatase domain protein 47192 47644 1
CDS - EFS13105.1 SF2457T_2812 ankyrin repeat A domain protein 47613 47924 -1
CDS - EFS13106.1 SF2457T_2813 ankyrin repeat protein A 47966 49372 -1
CDS - EFS13107.1 SF2457T_2814 acetate operon repressor 50114 50938 -1
CDS metH EFS13108.1 SF2457T_2815 methionine synthase 51138 54821 1
CDS - EFS13109.1 SF2457T_2816 sodium-dependent inorganic phosphate (Pi) transporter family protein 55041 56672 1
CDS - EFS13110.1 SF2457T_2817 peptidase E 56763 57452 -1
CDS - EFS13111.1 SF2457T_2818 L-sorbose 1-phosphate reductase 57834 59063 -1
CDS - EFS13112.1 SF2457T_2819 sorbose permease IID component 59115 59903 -1
CDS - EFS13113.1 SF2457T_2820 sorbose permease IIC component 59914 60711 -1
CDS - EFS13114.1 SF2457T_2821 sorbose-specific phosphotransferase enzyme IIB component 60777 61271 -1
CDS - EFS13115.1 SF2457T_2822 sorbose-specific phosphotransferase enzyme IIA component 61271 61678 -1
CDS - EFS13116.1 SF2457T_2823 sorbitol-6-phosphate 2-dehydrogenase 61688 62494 -1
CDS - EFS13117.1 SF2457T_2824 sorbitol operon regulator 62564 63511 -1
CDS - EFS13118.1 SF2457T_2825 ribosomal large subunit pseudouridine synthase F 63859 64731 1
CDS - EFS13119.1 SF2457T_2826 uncharacterized yjbD domain protein 64864 64986 -1
CDS - EFS13120.1 SF2457T_2827 integrase core domain protein 65057 65962 -1
CDS - EFS13121.1 SF2457T_2828 transposase family protein 65920 66285 -1
CDS - EFS13122.1 SF2457T_2829 hypothetical protein 66574 66708 -1
CDS - EFS13123.1 SF2457T_2830 sensor protein dcuS 66760 68331 1
CDS - EFS13124.1 SF2457T_2831 transcriptional regulatory protein dcuR 68328 69047 1
CDS - EFS13125.1 SF2457T_2832 anaerobic C4-dicarboxylate transporter dcuB 69618 70958 1
CDS - EFS13126.1 SF2457T_2833 fumarate hydratase class I, anaerobic 71036 72682 1
CDS - EFS13127.1 SF2457T_2834 inner membrane protein yjdF 72805 73434 1
CDS - EFS13128.1 SF2457T_2835 melibiose carrier protein 73573 74907 -1
CDS - EFS13129.1 SF2457T_2836 alpha-galactosidase 75097 76452 -1
CDS - EFS13130.1 SF2457T_2837 melibiose operon regulatory protein 76753 77643 1
CDS - EFS13131.1 SF2457T_2838 biodegradative arginine decarboxylase 77839 80109 1
CDS - EFS13132.1 SF2457T_2839 hypothetical protein 80355 80477 1
CDS - EFS13133.1 SF2457T_2840 HTH-type transcriptional regulator adiY 80434 81195 1
CDS - EFS13134.1 SF2457T_2841 arginine/agmatine antiporter 81332 82669 1
CDS - EFS13135.1 SF2457T_2842 sulfatase family protein 82803 84416 1
CDS - EFS13136.1 SF2457T_2843 transcriptional regulatory protein basR/pmrA 84413 85081 1
CDS - EFS13137.1 SF2457T_2844 sensor protein basS/pmrB 85091 86182 1
CDS - EFS13138.1 SF2457T_2845 proline/betaine transporter 86359 87861 -1
CDS - EFS13139.1 SF2457T_2846 uncharacterized protein yjcZ 88125 89003 -1
CDS - EFS13140.1 SF2457T_2847 uncharacterized protein yjdA 89000 91228 -1
CDS - EFS13141.1 SF2457T_2848 alkylphosphonate utilization operon protein PhnA 91631 91966 1
CDS - EFS13142.1 SF2457T_2849 3-demethylubiquinone-9 3-methyltransferase family protein 92124 92567 1
CDS phnC EFS13143.1 SF2457T_2850 phosphonate ABC transporter, ATP-binding protein 92700 93488 1
CDS phnD EFS13144.1 SF2457T_2851 phosphonate ABC transporter, periplasmic phosphonate binding protein 93513 94529 1
CDS - EFS13145.1 SF2457T_2852 phnE domain protein 94584 94808 1
CDS - EFS13146.1 SF2457T_2853 insertion element IS1 1/5/6 protein insB 94802 95305 -1
CDS - EFS13147.1 SF2457T_2854 transposase 95380 95955 1
CDS - EFS13148.1 SF2457T_2855 hypothetical protein 96279 96596 1
CDS - EFS13149.1 SF2457T_2856 EAL domain protein 96701 97534 1
CDS - EFS13150.1 SF2457T_2857 protein yhjK 97578 97856 1
CDS - EFS13151.1 SF2457T_2858 regulatory protein soxS 97859 98182 -1
CDS soxR EFS13152.1 SF2457T_2859 redox-sensitive transcriptional activator SoxR 98268 98732 1
CDS - EFS13153.1 SF2457T_2860 hypothetical protein 99094 99207 -1
CDS - EFS13154.1 SF2457T_2861 hypothetical protein 99204 99401 -1
CDS - EFS13155.1 SF2457T_2862 inner membrane protein yicO 99438 100787 1
CDS - EFS13156.1 SF2457T_2863 na+/H+ antiporter 100974 102587 1