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Shigella flexneri 2a str. 2457T gss2457T.assembly.53, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - EFS12932.1 SF2457T_2954 insertion element IS1 1/5/6 insB domain protein 1 251 1
CDS - EFS12933.1 SF2457T_2955 general L-amino acid transport system permease aapQ domain protein 339 812 -1
CDS - EFS12934.1 SF2457T_2956 general L-amino acid-binding periplasmic protein aapJ 880 1797 -1
CDS - EFS12935.1 SF2457T_2957 putative transposase 1934 2260 -1
CDS - EFS12936.1 SF2457T_2958 insertion element IS1 1/5/6 protein insB 2335 2838 1
CDS - EFS12937.1 SF2457T_2959 uncharacterized protein yhdU 2832 2966 -1
CDS - EFS12938.1 SF2457T_2960 uncharacterized adenine-specific methylase yhdJ 3116 4000 -1
CDS - EFS12939.1 SF2457T_2961 bacterial regulatory , Fis family protein 4086 4382 -1
CDS - EFS12940.1 SF2457T_2962 TIM-barrel , nifR3 family protein 4408 5373 -1
CDS prmA EFS12941.1 SF2457T_2963 ribosomal protein L11 methyltransferase 5702 6583 -1
CDS panF EFS12942.1 SF2457T_2964 sodium/pantothenate symporter 6595 8046 -1
CDS - EFS12943.1 SF2457T_2965 hypothetical protein 8036 8278 -1
CDS accC EFS12944.1 SF2457T_2966 acetyl-CoA carboxylase, biotin carboxylase 8387 9736 -1
CDS accB EFS12945.1 SF2457T_2967 acetyl-CoA carboxylase, biotin carboxyl carrier protein 9747 10217 -1
CDS - EFS12946.1 SF2457T_2968 hypothetical protein 10790 10909 -1
CDS - EFS12947.1 SF2457T_2969 protein yhdH 11195 12169 -1
CDS - EFS12948.1 SF2457T_2970 diguanylate cyclase domain protein 12321 14261 1
CDS - EFS12949.1 SF2457T_2971 rod shape-determining protein mreB 14566 15609 1
CDS mreC EFS12950.1 SF2457T_2972 rod shape-determining protein MreC 15675 16778 1
CDS mreD EFS12951.1 SF2457T_2973 rod shape-determining protein MreD 16778 17266 1
CDS maf EFS12952.1 SF2457T_2974 septum formation protein Maf 17275 17868 1
CDS - EFS12953.1 SF2457T_2975 ribonuclease G 17858 19327 1
CDS - EFS12954.1 SF2457T_2976 uncharacterized protein yhdP 19395 23195 1
CDS - EFS12955.1 SF2457T_2977 modulator of DNA gyrase family protein 23351 24796 1
CDS - EFS12956.1 SF2457T_2978 HTH-type transcriptional activator aaeR 24924 25853 -1
CDS - EFS12957.1 SF2457T_2979 hypothetical protein 25967 26239 1
CDS - EFS12958.1 SF2457T_2980 uncharacterized protein ydhJ 26247 27179 1
CDS - EFS12959.1 SF2457T_2981 p-hydroxybenzoic acid efflux pump subunit aaeB 27185 29152 1
CDS - EFS12960.1 SF2457T_2982 uncharacterized protein yhcO 29244 29516 1
CDS - EFS12961.1 SF2457T_2983 hypothetical protein 29572 29886 -1
CDS argR EFS12962.1 SF2457T_2984 arginine repressor 30200 30670 -1
CDS mdh EFS12963.1 SF2457T_2985 malate dehydrogenase, NAD-dependent 31105 32043 1
CDS degS EFS12964.1 SF2457T_2986 periplasmic serine peptidase DegS 32105 33172 -1
CDS - EFS12965.1 SF2457T_2987 protease degQ domain protein 33262 33408 -1
CDS - EFS12966.1 SF2457T_2988 protease degQ 33452 34609 -1
CDS - EFS12967.1 SF2457T_2989 hypothetical protein 34763 35161 -1
CDS - EFS12968.1 SF2457T_2990 AFG1-like ATPase family protein 35355 36482 1
CDS rplM EFS12969.1 SF2457T_2991 ribosomal protein L13 36701 37129 1
CDS - EFS12970.1 SF2457T_2992 ribosomal S9/S16 family protein 37145 37537 1
CDS - EFS12971.1 SF2457T_2993 hypothetical protein 37548 37676 -1
CDS - EFS12972.1 SF2457T_2994 stringent starvation protein A 37932 38570 1
CDS - EFS12973.1 SF2457T_2995 stringent starvation B family protein 38576 39073 1
CDS - EFS12974.1 SF2457T_2996 putative cryptic C4-dicarboxylate transporter dcuD 39116 40483 -1
CDS - EFS12975.1 SF2457T_2997 insertion element IS1 1/5/6 protein insB 40504 41007 -1
CDS - EFS12976.1 SF2457T_2998 putative transposase 41082 41369 1
CDS - EFS12977.1 SF2457T_2999 transcriptional regulator nanR 41648 42430 1
CDS nanA EFS12978.1 SF2457T_3000 N-acetylneuraminate lyase 42552 43445 1
CDS - EFS12979.1 SF2457T_3001 putative sialic acid transporter 43555 45045 1
CDS - EFS12980.1 SF2457T_3002 putative N-acetylmannosamine-6-P epimerase 45093 45782 1
CDS - EFS12981.1 SF2457T_3003 putative N-acetylmannosamine kinase 45779 46654 1
CDS - EFS12982.1 SF2457T_3004 hypothetical protein 46651 47115 1
CDS - EFS12983.1 SF2457T_3005 integrase core domain protein 47191 48261 -1
CDS - EFS12984.1 SF2457T_3006 IS600 orfA 48481 48669 -1
CDS - EFS12985.1 SF2457T_3007 glutamate synthase, small chain 49407 50825 -1
CDS - EFS12986.1 SF2457T_3008 glutamate synthase, large chain 50838 55295 -1
CDS - EFS12987.1 SF2457T_3009 radical SAM superfamily protein 55973 56902 1
CDS - EFS12988.1 SF2457T_3010 aerobic respiration control sensor protein arcB 56998 59334 1
CDS - EFS12989.1 SF2457T_3011 enhancing lycopene biosynthesis protein 2 59564 60217 1
CDS - EFS12990.1 SF2457T_3012 monofunctional biosynthetic peptidoglycan transglycosylase 60214 60645 1
CDS - EFS12991.1 SF2457T_3013 monofunctional biosynthetic peptidoglycan transglycosylase domain protein 60723 60941 1
CDS - EFS12992.1 SF2457T_3014 hypothetical protein 60938 61570 -1
CDS - EFS12993.1 SF2457T_3015 PTS HPr component phosphorylation site family protein 61783 61995 -1
CDS - EFS12994.1 SF2457T_3016 P-loop ATPase family protein 62052 62906 -1
CDS ptsN EFS12995.1 SF2457T_3017 PTS IIA-like nitrogen-regulatory protein PtsN 62952 63443 -1
CDS raiA EFS12996.1 SF2457T_3018 putative sigma 63561 63848 -1
CDS rpoN EFS12997.1 SF2457T_3019 RNA polymerase sigma-54 factor 63871 65304 -1
CDS - EFS12998.1 SF2457T_3020 ABC transporter family protein 65352 66077 -1
CDS lptA EFS12999.1 SF2457T_3021 lipopolysaccharide transport periplasmic protein LptA 66084 66605 -1
CDS - EFS13000.1 SF2457T_3022 hypothetical protein 66610 67185 -1
CDS - EFS13001.1 SF2457T_3023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 67182 67748 -1
CDS - EFS13002.1 SF2457T_3024 arabinose 5-phosphate isomerase 67769 68755 -1
CDS - EFS13003.1 SF2457T_3025 sodium/calcium exchanger family protein 68769 69734 -1
CDS - EFS13004.1 SF2457T_3026 ABC transporter family protein 69944 70753 1
CDS - EFS13005.1 SF2457T_3027 toluene tolerance protein Ttg2B 70761 71543 1
CDS - EFS13006.1 SF2457T_3028 mce related family protein 71548 72099 1
CDS - EFS13007.1 SF2457T_3029 toluene tolerance, Ttg2 family protein 72118 72753 1
CDS - EFS13008.1 SF2457T_3030 hypothetical protein 72753 73046 1
CDS - EFS13009.1 SF2457T_3031 bolA-like family protein 73206 73460 1
CDS murA EFS13010.1 SF2457T_3032 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 73515 74774 1
CDS - EFS13011.1 SF2457T_3033 sugar fermentation stimulation protein B 74822 75100 -1
CDS - EFS13012.1 SF2457T_3034 polyprenyl synthetase family protein 75327 76298 -1
CDS rplU EFS13013.1 SF2457T_3035 ribosomal protein L21 76556 76867 1
CDS rpmA EFS13014.1 SF2457T_3036 ribosomal protein L27 76888 77145 1
CDS - EFS13015.1 SF2457T_3037 hypothetical protein 77272 78237 1
CDS - EFS13016.1 SF2457T_3038 GTP-binding protein Obg/CgtA 78253 79425 1
CDS dacB EFS13017.1 SF2457T_3039 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 79611 81017 -1
CDS greA EFS13018.1 SF2457T_3040 transcription elongation factor GreA domain protein 81292 81768 1
CDS - EFS13019.1 SF2457T_3041 CRS1 / YhbY domain protein 81924 82217 -1
CDS rrmJ EFS13020.1 SF2457T_3042 ribosomal RNA large subunit methyltransferase J 82343 82972 1
CDS - EFS13021.1 SF2457T_3043 hypothetical protein 82969 83103 -1
CDS hflB EFS13022.1 SF2457T_3044 cell division protease ftsH 83063 85006 1
CDS folP EFS13023.1 SF2457T_3045 dihydropteroate synthase 85096 85944 1
CDS glmM EFS13024.1 SF2457T_3046 phosphoglucosamine mutase 85937 87274 1
CDS secG EFS13025.1 SF2457T_3047 preprotein translocase, SecG subunit 87502 87834 1
tRNA - - SF2457T_3048 tRNA-Leu 87849 87935 1
CDS - EFS13026.1 SF2457T_3049 UPF0141 inner membrane yhbX domain protein 88515 88934 1
CDS - EFS13027.1 SF2457T_3050 UPF0141 inner membrane yhbX domain protein 89070 90020 1
CDS argG EFS13028.1 SF2457T_3051 argininosuccinate synthase 90028 91371 -1
CDS - EFS13029.1 SF2457T_3052 hypothetical protein 91457 91579 -1
tRNA - - SF2457T_3053 tRNA-Met 91719 91795 1