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Shigella flexneri 2a str. 2457T gss2457T.assembly.54, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - EFS12803.1 SF2457T_3085 IS2 element protein 91 549 1
CDS - EFS12804.1 SF2457T_3086 integrase core domain protein 503 994 1
CDS - EFS12805.1 SF2457T_3087 uncharacterized fimbrial chaperone yraI 2759 3421 -1
CDS - EFS12806.1 SF2457T_3088 fimbrial family protein 3534 3881 -1
CDS - EFS12807.1 SF2457T_3089 IS150 ORF1 domain protein 4030 4209 -1
CDS - EFS12808.1 SF2457T_3090 insertion element IS1 1/5/6 protein insB 4284 4787 1
CDS - EFS12809.1 SF2457T_3091 putative galactosamine-6-phosphate isomerase 5296 6051 -1
CDS - EFS12810.1 SF2457T_3092 N-acetylgalactosamine permease IID component 6052 6843 -1
CDS - EFS12811.1 SF2457T_3093 N-acetylgalactosamine permease IIC component 1 6833 7636 -1
CDS - EFS12812.1 SF2457T_3094 putative PTS system, sorbose subfamily, IIB component 7675 7869 -1
CDS - EFS12813.1 SF2457T_3095 insertion element IS1 1/5/6 protein insB 7891 8394 -1
CDS - EFS12814.1 SF2457T_3096 transposase 8469 8675 1
CDS - EFS12815.1 SF2457T_3097 agaF 9057 9491 -1
CDS - EFS12816.1 SF2457T_3098 N-acetylgalactosamine permease IID component 9578 10387 -1
CDS - EFS12817.1 SF2457T_3099 N-acetylgalactosamine permease IIC component 2 10377 11156 -1
CDS - EFS12818.1 SF2457T_3100 N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2 11167 11640 -1
CDS - EFS12819.1 SF2457T_3101 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 11663 12943 -1
CDS - EFS12820.1 SF2457T_3102 putative aga operon transcriptional repressor 13225 14016 1
CDS garD EFS12821.1 SF2457T_3103 galactarate dehydratase 14068 15639 -1
CDS - EFS12822.1 SF2457T_3104 hypothetical protein 15686 15805 -1
CDS - EFS12823.1 SF2457T_3105 putative glucarate transporter 16014 17348 1
CDS - EFS12824.1 SF2457T_3106 2-dehydro-3-deoxyglucarate aldolase domain protein 17364 17588 1
CDS - EFS12825.1 SF2457T_3107 2-dehydro-3-deoxyglucarate aldolase 17589 18134 1
CDS - EFS12826.1 SF2457T_3108 2-hydroxy-3-oxopropionate reductase 18170 19054 1
CDS - EFS12827.1 SF2457T_3109 glycerate kinase 2 19151 20296 1
CDS - EFS12828.1 SF2457T_3110 uncharacterized protein yhaC 21326 22078 -1
CDS - EFS12829.1 SF2457T_3111 threonine dehydratase operon activator protein 23310 23528 -1
CDS - EFS12830.1 SF2457T_3112 HTH-type transcriptional regulator tdcA 23844 24782 1
CDS - EFS12831.1 SF2457T_3113 threonine dehydratase catabolic 24881 25870 1
CDS tdcC EFS12832.1 SF2457T_3114 threonine/serine transporter TdcC 25892 27223 1
CDS ackA EFS12833.1 SF2457T_3115 acetate kinase 27249 28457 1
CDS - EFS12834.1 SF2457T_3116 formate acetyltransferase 28491 30785 1
CDS - EFS12835.1 SF2457T_3117 putative translation initiation inhibitor 30799 31188 1
CDS - EFS12836.1 SF2457T_3118 L-serine dehydratase tdcG 31797 32624 1
CDS - EFS12837.1 SF2457T_3119 serine transporter family protein 32899 34230 1
CDS - EFS12838.1 SF2457T_3120 hypothetical protein 34258 35568 1
CDS - EFS12839.1 SF2457T_3121 hypothetical protein 35780 35944 -1
CDS - EFS12840.1 SF2457T_3122 pirin family protein 35967 36617 -1
CDS - EFS12841.1 SF2457T_3123 bacterial regulatory helix-turn-helix , lysR family protein 36773 37669 1
CDS - EFS12842.1 SF2457T_3124 hypothetical protein 37876 38244 -1
CDS - EFS12843.1 SF2457T_3125 uncharacterized protein yqjG 38537 39523 -1
CDS - EFS12844.1 SF2457T_3126 hypothetical protein 39593 39979 -1
CDS - EFS12845.1 SF2457T_3127 uncharacterized protein yqjK 40075 40374 -1
CDS - EFS12846.1 SF2457T_3128 inner membrane protein yqjE 40364 40768 -1
CDS - EFS12847.1 SF2457T_3129 hypothetical protein 40771 41076 -1
CDS - EFS12848.1 SF2457T_3130 hypothetical protein 41034 41468 -1
CDS - EFS12849.1 SF2457T_3131 uncharacterized protein yqjB 41615 41983 -1
CDS - EFS12850.1 SF2457T_3132 hypothetical protein 42002 42664 -1
CDS - EFS12851.1 SF2457T_3133 uxu operon transcriptional regulator 43009 43785 -1
CDS - EFS12852.1 SF2457T_3134 insertion element IS1 1/5/6 protein insB 43893 44396 -1
CDS - EFS12853.1 SF2457T_3135 outer membrane fimbrial user protein 44471 46747 1
CDS - EFS12854.1 SF2457T_3136 cblD like pilus biogenesis initiator family protein 46744 47832 1
CDS - EFS12855.1 SF2457T_3137 hexuronate transporter 47920 49218 -1
CDS - EFS12856.1 SF2457T_3138 glucuronate isomerase family protein 49702 51114 1
CDS - EFS12857.1 SF2457T_3139 altronate hydrolase 51129 52616 1
CDS - EFS12858.1 SF2457T_3140 inner membrane protein ygjV 52699 53250 1
CDS - EFS12859.1 SF2457T_3141 serine/threonine transporter sstT 53255 54499 -1
CDS - EFS12860.1 SF2457T_3142 integral membrane TerC family protein 55095 56060 -1
CDS - EFS12861.1 SF2457T_3143 putative oxidoreductase ygjR 56331 57329 -1
CDS - EFS12862.1 SF2457T_3144 hypothetical protein 57408 58100 -1
CDS - EFS12863.1 SF2457T_3145 hypothetical protein 58177 58680 -1
CDS - EFS12864.1 SF2457T_3146 ribosomal RNA large subunit methyltransferase G 58765 59901 1
CDS - EFS12865.1 SF2457T_3147 uncharacterized protein ygjN 60186 60500 1
CDS - EFS12866.1 SF2457T_3148 helix-turn-helix family protein 60545 60913 1
CDS - EFS12867.1 SF2457T_3149 2,4-dienoyl-CoA reductase 60958 62976 -1
CDS - EFS12868.1 SF2457T_3150 uncharacterized protein ygjK 63202 65553 -1
CDS - EFS12869.1 SF2457T_3151 uncharacterized ygjJ domain protein 65570 65989 -1
CDS - EFS12870.1 SF2457T_3152 uncharacterized protein ygjJ 65967 66320 -1
CDS - EFS12871.1 SF2457T_3153 uncharacterized ygjJ domain protein 66321 66641 -1
CDS - EFS12872.1 SF2457T_3154 amino acid permease family protein 66775 68208 -1
CDS - EFS12873.1 SF2457T_3155 hypothetical protein 68271 68720 -1
CDS - EFS12874.1 SF2457T_3156 evolved beta-galactosidase subunit alpha 68717 71803 -1
CDS - EFS12875.1 SF2457T_3157 HTH-type transcriptional regulator ebgR 71986 72969 -1
CDS - EFS12876.1 SF2457T_3158 hypothetical protein 73187 73324 1
CDS - EFS12877.1 SF2457T_3159 putative tRNA binding domain protein 73321 73518 1
CDS ygjG EFS12878.1 SF2457T_3160 putrescine aminotransferase 73560 74939 -1
CDS - EFS12879.1 SF2457T_3161 hypothetical protein 75038 75166 1
CDS - EFS12880.1 SF2457T_3162 aerotaxis receptor 75357 76403 1
CDS - EFS12881.1 SF2457T_3163 aerotaxis receptor domain protein 76476 76877 1
CDS - EFS12882.1 SF2457T_3164 transcriptional regulator PadR-like family protein 77031 77654 -1
CDS - EFS12883.1 SF2457T_3165 siderophore-interacting FAD-binding domain protein 77931 78395 1
CDS - EFS12884.1 SF2457T_3166 siderophore-interacting family protein 78362 78676 1
tRNA - - SF2457T_3167 tRNA-Met 78730 78805 -1
CDS - EFS12885.1 SF2457T_3168 uracil DNA glycosylase superfamily protein 78966 79283 1
CDS - EFS12886.1 SF2457T_3169 transposase DDE domain protein 79468 80796 -1
CDS aroA EFS12887.1 SF2457T_3170 3-phosphoshikimate 1-carboxyvinyltransferase 80940 82223 -1
CDS serC EFS12888.1 SF2457T_3171 phosphoserine aminotransferase 82294 83382 -1
CDS - EFS12889.1 SF2457T_3172 uncharacterized protein ycaP 83581 83871 -1
CDS - EFS12890.1 SF2457T_3173 uncharacterized protein ycaP 83930 84067 -1
CDS - EFS12891.1 SF2457T_3174 uncharacterized ycaP domain protein 84091 84207 -1
CDS - EFS12892.1 SF2457T_3175 uncharacterized domain protein 84337 86097 1
CDS - EFS12893.1 SF2457T_3176 putative formate transporter 86545 87360 1
CDS pflB EFS12894.1 SF2457T_3177 formate acetyltransferase 87415 89697 1
CDS pflA EFS12895.1 SF2457T_3178 pyruvate formate-lyase 1-activating enzyme 89889 90629 1
CDS - EFS12896.1 SF2457T_3179 IS600 ORF2 domain protein 90722 90967 -1
CDS - EFS12897.1 SF2457T_3180 transposase family protein 91038 91340 1
CDS - EFS12898.1 SF2457T_3181 putative transposase 91481 91843 1
CDS - EFS12899.1 SF2457T_3182 putative transposase 91972 92196 1
CDS - EFS12900.1 SF2457T_3183 insertion element IS1 1/5/6 protein insB 92311 92814 1
CDS - EFS12901.1 SF2457T_3184 integrase core domain protein 93057 93770 -1