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Shigella flexneri 2a str. 2457T gss2457T.assembly.57, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - EFS12251.1 SF2457T_3400 marR family protein 109 516 1
CDS - EFS12252.1 SF2457T_3401 RNA polymerase sigma factor rpoS domain protein 636 866 -1
CDS - EFS12253.1 SF2457T_3402 RNA polymerase sigma factor rpoS 863 1627 -1
CDS - EFS12254.1 SF2457T_3403 lipoprotein nlpD 1690 2679 -1
CDS - EFS12255.1 SF2457T_3404 hypothetical protein 2705 2854 1
CDS pcm EFS12256.1 SF2457T_3405 protein-L-isoaspartate O-methyltransferase 2969 3595 -1
CDS surE EFS12257.1 SF2457T_3406 5'/3'-nucleotidase SurE 3589 4341 -1
CDS - EFS12258.1 SF2457T_3407 tRNA pseudouridine synthase D 4331 5380 -1
CDS ispF EFS12259.1 SF2457T_3408 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5377 5856 -1
CDS ispD EFS12260.1 SF2457T_3409 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5856 6536 -1
CDS - EFS12261.1 SF2457T_3410 septum formation initiator family protein 6585 6896 -1
CDS - EFS12262.1 SF2457T_3411 inner membrane protein ygbE 7090 7413 -1
CDS cysC EFS12263.1 SF2457T_3412 adenylylsulfate kinase 7463 8068 -1
CDS cysN EFS12264.1 SF2457T_3413 bifunctional enzyme nodQ 8068 9495 -1
CDS cysD EFS12265.1 SF2457T_3414 sulfate adenylyltransferase subunit 2 9497 10405 -1
CDS - EFS12266.1 SF2457T_3415 alkaline phosphatase isozyme conversion protein 10657 11694 1
CDS - EFS12267.1 SF2457T_3416 CRISPR-associated helicase Cas3 domain protein 11780 12889 -1
CDS cysH EFS12268.1 SF2457T_3417 phosphoadenosine phosphosulfate reductase 13540 14274 -1
CDS cysI EFS12269.1 SF2457T_3418 sulfite reductase (NADPH) hemoprotein, beta-component 14348 16060 -1
CDS - EFS12270.1 SF2457T_3419 sulfite reductase flavoprotein, alpha-component 16060 17823 -1
CDS - EFS12271.1 SF2457T_3420 hypothetical protein 18072 18185 -1
CDS queD EFS12272.1 SF2457T_3421 queuosine biosynthesis protein QueD 18178 18540 1
CDS - EFS12273.1 SF2457T_3422 putative electron transfer flavoprotein-quinone oxidoreductase ygcN 18618 19889 1
CDS - EFS12274.1 SF2457T_3423 hypothetical protein 19880 20140 1
CDS - EFS12275.1 SF2457T_3424 glycerol-3-phosphate responsive antiterminator family protein 20190 20522 1
CDS - EFS12276.1 SF2457T_3425 glycerol-3-phosphate responsive antiterminator 20568 20732 1
CDS - EFS12277.1 SF2457T_3426 putative electron transfer flavoprotein subunit ygcQ 20880 21740 -1
CDS - EFS12278.1 SF2457T_3427 putative electron transfer flavoprotein subunit ygcR 21737 22516 -1
CDS - EFS12279.1 SF2457T_3428 inner membrane metabolite transport protein ygcS 22494 23831 -1
CDS - EFS12280.1 SF2457T_3429 putative FAD-binding protein 23925 24719 -1
CDS - EFS12281.1 SF2457T_3430 insertion element IS1 1/5/6 protein insB 25028 25531 1
CDS - EFS12282.1 SF2457T_3431 uncharacterized protein ygcF 25570 26241 -1
CDS - EFS12283.1 SF2457T_3432 hypothetical protein 26380 26520 1
CDS - EFS12284.1 SF2457T_3433 transposase domain protein 26539 26754 -1
CDS - EFS12285.1 SF2457T_3434 insertion element IS1 1/5/6 protein insB 26815 27333 1
CDS - EFS12286.1 SF2457T_3435 hypothetical protein 27335 28144 1
CDS eno EFS12287.1 SF2457T_3436 phosphopyruvate hydratase 28204 29502 -1
CDS pyrG EFS12288.1 SF2457T_3437 CTP synthase 29590 31227 -1
CDS - EFS12289.1 SF2457T_3438 mazG family protein 31455 32246 -1
CDS - EFS12290.1 SF2457T_3439 GTP pyrophosphokinase 32342 34576 -1
CDS rumA EFS12291.1 SF2457T_3440 23S rRNA (uracil-5-)-methyltransferase RumA 34624 35925 -1
CDS - EFS12292.1 SF2457T_3441 signal transduction histidine-protein kinase barA 35982 38738 1
CDS - EFS12293.1 SF2457T_3442 hypothetical protein 38869 38985 -1
CDS gudD EFS12294.1 SF2457T_3443 glucarate dehydratase 38970 40274 -1
CDS - EFS12295.1 SF2457T_3444 putative glucarate dehydratase 40331 41638 -1
CDS - EFS12296.1 SF2457T_3445 putative glucarate transporter 41673 43025 -1
CDS - EFS12297.1 SF2457T_3446 flavodoxin family protein 43459 43908 -1
CDS - EFS12298.1 SF2457T_3447 RNA pseudouridylate synthase family protein 43926 44708 -1
CDS - EFS12299.1 SF2457T_3448 hypothetical protein 44708 45037 -1
CDS - EFS12300.1 SF2457T_3449 syd family protein 45659 46204 -1
CDS queF EFS12301.1 SF2457T_3450 7-cyano-7-deazaguanine reductase 46272 47120 1
CDS - EFS12302.1 SF2457T_3451 putative lysine decarboxylase family protein 47232 48596 1
CDS - EFS12303.1 SF2457T_3452 transposase DDE domain protein 48698 50026 1
CDS - EFS12304.1 SF2457T_3453 serine transporter family protein 50590 51879 1
CDS sdaA EFS12305.1 SF2457T_3454 L-serine ammonia-lyase 51937 53304 1
CDS - EFS12306.1 SF2457T_3455 exonuclease family protein 53415 54170 1
CDS fucO EFS12307.1 SF2457T_3456 lactaldehyde reductase 54223 55371 -1
CDS fucA EFS12308.1 SF2457T_3457 L-fuculose phosphate aldolase 55399 56046 -1
CDS - EFS12309.1 SF2457T_3458 hypothetical protein 56236 56373 1
CDS fucP EFS12310.1 SF2457T_3459 L-fucose:H+ symporter permease 56593 57909 1
CDS fucI EFS12311.1 SF2457T_3460 L-fucose isomerase 57942 59717 1
CDS - EFS12312.1 SF2457T_3461 L-fuculokinase domain protein 59796 60005 1
CDS - EFS12313.1 SF2457T_3462 L-fuculokinase 59989 60645 1
CDS - EFS12314.1 SF2457T_3463 L-fuculokinase domain protein 60724 61245 1
CDS - EFS12315.1 SF2457T_3464 rbsD / FucU transport family protein 61247 61669 1
CDS - EFS12316.1 SF2457T_3465 bacterial regulatory s, gntR family protein 61727 62458 1
CDS - EFS12317.1 SF2457T_3466 SAM-dependent methyltransferase-like protein 62502 63587 -1
CDS - EFS12318.1 SF2457T_3467 hypothetical protein 63595 63990 -1
CDS - EFS12319.1 SF2457T_3468 glycine cleavage system transcriptional activator 64009 64926 -1
CDS - EFS12320.1 SF2457T_3469 hypothetical protein 65277 65504 -1
CDS csdA EFS12321.1 SF2457T_3470 cysteine desulfurase, catalytic subunit CsdA 65696 66901 1
CDS csdE EFS12322.1 SF2457T_3471 cysteine desulfurase, sulfur acceptor subunit CsdE 66901 67344 1
CDS - EFS12323.1 SF2457T_3472 uncharacterized protein ygdL 67395 68201 -1
CDS - EFS12324.1 SF2457T_3473 membrane-bound lytic murein transglycosylase A 68439 69506 -1
tRNA - - SF2457T_3474 tRNA-Met 69745 69821 1
tRNA - - SF2457T_3475 tRNA-Met 69855 69931 1
CDS - EFS12325.1 SF2457T_3476 twin-arginine translocation pathway signal sequence domain protein 70006 71259 -1
CDS - EFS12326.1 SF2457T_3477 hypothetical protein 71464 71649 -1
CDS argA EFS12327.1 SF2457T_3478 amino-acid N-acetyltransferase 71644 72822 1
CDS recD EFS12328.1 SF2457T_3479 exodeoxyribonuclease V, alpha subunit 72884 74710 -1
CDS recB EFS12329.1 SF2457T_3480 exodeoxyribonuclease V, beta subunit 74710 78252 -1
CDS - EFS12330.1 SF2457T_3481 protease 3 78245 81133 -1
CDS recC EFS12331.1 SF2457T_3482 exodeoxyribonuclease V, gamma subunit 81309 84677 -1
CDS - EFS12332.1 SF2457T_3483 prepilin peptidase-dependent protein C 84690 85040 -1
CDS - EFS12333.1 SF2457T_3484 uncharacterized protein ygdB 85025 85432 -1
CDS - EFS12334.1 SF2457T_3485 prepilin peptidase-dependent protein B 85429 85992 -1
CDS - EFS12335.1 SF2457T_3486 prepilin peptidase-dependent protein A 85983 86177 -1
CDS - EFS12336.1 SF2457T_3487 putative prepilin peptidase dependent protein A 86319 86453 -1
CDS thyA EFS12337.1 SF2457T_3488 thymidylate synthase 86637 87431 -1
CDS lgt EFS12338.1 SF2457T_3489 prolipoprotein diacylglyceryl transferase 87438 88313 -1
CDS - EFS12339.1 SF2457T_3490 phosphoenolpyruvate-protein phosphotransferase ptsP 88464 90710 -1
CDS - EFS12340.1 SF2457T_3491 NUDIX domain protein 90723 91253 -1
CDS mutH EFS12341.1 SF2457T_3492 DNA mismatch repair endonuclease MutH 91938 92627 1
CDS - EFS12342.1 SF2457T_3493 integral membrane TerC family protein 92696 93409 1
CDS - EFS12343.1 SF2457T_3494 hypothetical protein 93547 93765 1
CDS - EFS12344.1 SF2457T_3495 protein tas 93873 94913 1
CDS - EFS12345.1 SF2457T_3496 lysophospholipid transporter lplT 94946 96091 -1
CDS - EFS12346.1 SF2457T_3497 bifunctional protein aas 96129 98288 -1
CDS - EFS12347.1 SF2457T_3498 HTH-type transcriptional regulator galR 98874 99905 1
CDS lysA EFS12348.1 SF2457T_3499 diaminopimelate decarboxylase 99912 101174 -1