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Shigella flexneri 2a str. 2457T gss2457T.assembly.70, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS hrpB EFS10932.1 SF2457T_4992 ATP-dependent helicase HrpB 19 2493 -1
CDS - EFS10933.1 SF2457T_4993 2'-5' RNA ligase 2522 3052 1
CDS sfsA EFS10934.1 SF2457T_4994 sugar fermentation stimulation protein 3067 3771 1
CDS dksA EFS10935.1 SF2457T_4995 RNA polymerase-binding protein DksA 3949 4404 1
CDS - EFS10936.1 SF2457T_4996 glutamyl-Q tRNA 4471 5367 1
CDS pcnB EFS10937.1 SF2457T_4997 poly(A) polymerase family protein 5511 6824 1
CDS folK EFS10938.1 SF2457T_4998 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 6821 7300 1
CDS - EFS10939.1 SF2457T_4999 hypothetical protein 7306 7428 -1
CDS - EFS10940.1 SF2457T_5000 insertion element IS1 1/5/6 protein insB 7448 7951 -1
CDS - EFS10941.1 SF2457T_5001 uncharacterized fimbrial-like protein yadC 8026 8526 1
CDS panB EFS10942.1 SF2457T_5002 3-methyl-2-oxobutanoate hydroxymethyltransferase 8639 9433 1
CDS panC EFS10943.1 SF2457T_5003 pantoate--beta-alanine ligase 9445 10296 1
CDS - EFS10944.1 SF2457T_5004 uncharacterized protein yadD 10370 11176 -1
CDS - EFS10945.1 SF2457T_5005 hypothetical protein 11393 11578 -1
CDS panD EFS10946.1 SF2457T_5006 aspartate 1-decarboxylase 11558 11926 1
CDS - EFS10947.1 SF2457T_5007 polysaccharide deacetylase family protein 11930 13159 -1
CDS - EFS10948.1 SF2457T_5008 putative phosphotransferase enzyme IIA component yadI 13223 13663 -1
CDS - EFS10949.1 SF2457T_5009 ABC-2 type transporter family protein 13768 14538 -1
CDS - EFS10950.1 SF2457T_5010 uncharacterized ABC transporter ATP-binding protein yadG 14535 15461 -1
CDS - EFS10951.1 SF2457T_5011 carbonic anhydrase family protein 15570 16232 1
CDS hpt EFS10952.1 SF2457T_5012 hypoxanthine phosphoribosyltransferase 16273 16809 -1
CDS - EFS10953.1 SF2457T_5013 quinoprotein glucose dehydrogenase 17015 19405 1
CDS - EFS10954.1 SF2457T_5014 blue copper oxidase cueO 19452 21002 -1
CDS - EFS10955.1 SF2457T_5015 yacC 21189 21515 1
CDS speE EFS10956.1 SF2457T_5016 spermidine synthase 21621 22487 1
CDS speD EFS10957.1 SF2457T_5017 S-adenosylmethionine decarboxylase proenzyme 22503 23297 1
CDS - EFS10958.1 SF2457T_5018 hypothetical protein 23335 23697 -1
CDS acnB EFS10959.1 SF2457T_5019 aconitate hydratase 2 23872 26391 -1
CDS - EFS10960.1 SF2457T_5020 uncharacterized yacH domain protein 26829 27731 1
CDS - EFS10961.1 SF2457T_5021 hypothetical protein 27711 27878 -1
CDS - EFS10962.1 SF2457T_5022 uncharacterized yacH domain protein 27894 28676 1
CDS lpdA EFS10963.1 SF2457T_5023 dihydrolipoyl dehydrogenase 28747 30171 -1
CDS aceF EFS10964.1 SF2457T_5024 dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex 30496 32376 -1
CDS aceE EFS10965.1 SF2457T_5025 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 32391 35030 -1
CDS - EFS10966.1 SF2457T_5026 pyruvate dehydrogenase complex repressor 35215 35979 -1
CDS - EFS10967.1 SF2457T_5027 aromatic amino acid transport protein aroP 36523 37893 1
CDS - EFS10968.1 SF2457T_5028 regulates ampC 37936 38790 -1
CDS - EFS10969.1 SF2457T_5029 protein ampD 38787 39338 -1
CDS nadC EFS10970.1 SF2457T_5030 nicotinate-nucleotide diphosphorylase 39426 40319 1
CDS - EFS10971.1 SF2457T_5031 pilA 40522 40962 1
CDS - EFS10972.1 SF2457T_5032 type IV pilus assembly tapB domain protein 40972 41769 1
CDS - EFS10973.1 SF2457T_5033 gspE family HofB domain protein 41925 42119 1
CDS - EFS10974.1 SF2457T_5034 bacterial type II secretion system F domain protein 42109 43311 1
CDS guaC EFS10975.1 SF2457T_5035 guanosine monophosphate reductase 43346 44389 -1
CDS coaE EFS10976.1 SF2457T_5036 dephospho-CoA kinase 44614 45234 1
CDS - EFS10977.1 SF2457T_5037 hypothetical protein 45234 45977 1
CDS - EFS10978.1 SF2457T_5038 hypothetical protein 45987 46184 1
CDS - EFS10979.1 SF2457T_5039 mutator mutT protein 46284 46673 -1
CDS secA EFS10980.1 SF2457T_5040 preprotein translocase, SecA subunit 46733 49438 -1
CDS - EFS10981.1 SF2457T_5041 secretion monitor 49500 50012 -1
CDS lpxC EFS10982.1 SF2457T_5042 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 50243 51160 -1
CDS ftsZ EFS10983.1 SF2457T_5043 cell division protein FtsZ 51261 52412 -1
CDS ftsA EFS10984.1 SF2457T_5044 cell division protein FtsA 52473 53735 -1
CDS - EFS10985.1 SF2457T_5045 cell division protein ftsQ 53732 54562 -1
CDS - EFS10986.1 SF2457T_5046 D-alanine--D-alanine ligase B 54564 55484 -1
CDS murC EFS10987.1 SF2457T_5047 UDP-N-acetylmuramate--alanine ligase 55477 56952 -1
CDS murG EFS10988.1 SF2457T_5048 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 57006 58043 -1
CDS ftsW EFS10989.1 SF2457T_5049 cell division protein FtsW 58070 59188 -1
CDS murD EFS10990.1 SF2457T_5050 UDP-N-acetylmuramoylalanine--D-glutamate ligase 59314 60630 -1
CDS mraY EFS10991.1 SF2457T_5051 phospho-N-acetylmuramoyl-pentapeptide- transferase 60633 61715 -1
CDS murF EFS10992.1 SF2457T_5052 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 61709 63067 -1
CDS murE EFS10993.1 SF2457T_5053 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 63064 64536 -1
CDS - EFS10994.1 SF2457T_5054 penicillin binding transpeptidase domain protein 64538 66304 -1
CDS ftsL EFS10995.1 SF2457T_5055 cell division protein FtsL 66320 66685 -1
CDS mraW EFS10996.1 SF2457T_5056 S-adenosyl-methyltransferase MraW 66682 67623 -1
CDS - EFS10997.1 SF2457T_5057 protein MraZ 67625 68083 -1
CDS - EFS10998.1 SF2457T_5058 hypothetical protein 68407 68523 1
CDS - EFS10999.1 SF2457T_5059 insertion element IS1 1/5/6 protein insB 68642 69145 -1
CDS - EFS11000.1 SF2457T_5060 putative transposase 69220 69465 1
CDS - EFS11001.1 SF2457T_5061 fructose repressor 69462 70466 -1
CDS - EFS11002.1 SF2457T_5062 hypothetical protein 70463 70594 -1
CDS ilvN EFS11003.1 SF2457T_5063 acetolactate synthase, small subunit 70646 71137 -1
CDS ilvB EFS11004.1 SF2457T_5064 acetolactate synthase, large subunit, biosynthetic type 71140 72864 -1
CDS - EFS11005.1 SF2457T_5065 putative membrane protein 72924 73049 -1
CDS - EFS11006.1 SF2457T_5066 putative HTH-type transcriptional regulator leuO 73182 74126 -1
CDS - EFS11007.1 SF2457T_5067 hypothetical protein 74203 74355 -1
CDS - EFS11008.1 SF2457T_5068 hypothetical protein 74450 74566 1
CDS leuA EFS11009.1 SF2457T_5069 2-isopropylmalate synthase 74964 76535 1
CDS leuB EFS11010.1 SF2457T_5070 3-isopropylmalate dehydrogenase 76535 77626 1
CDS leuC EFS11011.1 SF2457T_5071 3-isopropylmalate dehydratase large subunit 1 77629 79029 1
CDS leuD EFS11012.1 SF2457T_5072 3-isopropylmalate dehydratase small subunit 1 79040 79645 1
CDS - EFS11013.1 SF2457T_5073 sugar efflux transporter A 79694 80854 -1
CDS - EFS11014.1 SF2457T_5074 hypothetical protein 80974 81105 -1
CDS - EFS11015.1 SF2457T_5075 HTH-type transcriptional regulator sgrR 81194 82849 1
CDS thiB EFS11016.1 SF2457T_5076 thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein 83013 83996 1
CDS thiP EFS11017.1 SF2457T_5077 thiamine/thiamine pyrophosphate ABC transporter, permease protein 83972 85582 1
CDS thiQ EFS11018.1 SF2457T_5078 thiamine ABC transporter, ATP-binding protein 85566 86264 1
CDS - EFS11019.1 SF2457T_5079 inner membrane protein yabI 86378 87142 -1
CDS - EFS11020.1 SF2457T_5080 arabinose operon regulatory protein 87228 88106 -1
CDS araB EFS11021.1 SF2457T_5081 L-ribulokinase 88445 90145 1
CDS - EFS11022.1 SF2457T_5082 L-arabinose isomerase 90156 91658 1
CDS araD EFS11023.1 SF2457T_5083 L-ribulose-5-phosphate 4-epimerase 91858 92553 1
CDS - EFS11024.1 SF2457T_5084 DNA polymerase II 92628 94979 1
CDS - EFS11025.1 SF2457T_5085 RNA polymerase-associated protein rapA 95291 98050 1
CDS - EFS11026.1 SF2457T_5086 RNA pseudouridylate synthase family protein 98062 98721 1
CDS - EFS11027.1 SF2457T_5087 dnaJ-like protein djlA 98838 99653 -1
CDS - EFS11028.1 SF2457T_5088 LPS-assembly protein 99908 102262 1
CDS - EFS11029.1 SF2457T_5089 chaperone surA 102315 103601 1
CDS pdxA EFS11030.1 SF2457T_5090 4-hydroxythreonine-4-phosphate dehydrogenase 103601 104590 1
CDS ksgA EFS11031.1 SF2457T_5091 dimethyladenosine transferase 104587 105408 1