xBASE Logo
About | Contact | Home

Shigella flexneri 2a str. 2457T gss2457T.assembly.71, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS agcS EFS10693.1 SF2457T_5138 amino acid carrier family protein 93 1133 1
CDS - EFS10694.1 SF2457T_5139 amino-acid carrier alsT domain protein 1155 1523 1
CDS - EFS10695.1 SF2457T_5140 hypothetical protein 1593 2369 1
CDS - EFS10696.1 SF2457T_5141 hypothetical protein 2515 2742 1
CDS - EFS10697.1 SF2457T_5142 hypothetical protein 2815 2964 -1
CDS thrC EFS10698.1 SF2457T_5143 threonine synthase 3032 4318 -1
CDS thrB EFS10699.1 SF2457T_5144 homoserine kinase 4319 5251 -1
CDS - EFS10700.1 SF2457T_5145 bifunctional aspartokinase/homoserine dehydrogenase 1 5253 7715 -1
CDS - EFS10701.1 SF2457T_5146 uncharacterized tRNA/rRNA methyltransferase lasT 8075 8761 -1
CDS - EFS10702.1 SF2457T_5147 aerobic respiration control protein arcA 9397 10113 1
CDS - EFS10703.1 SF2457T_5148 inner membrane protein creD 10172 11524 -1
CDS - EFS10704.1 SF2457T_5149 sensor protein creC 11582 13006 -1
CDS - EFS10705.1 SF2457T_5150 transcriptional regulatory protein creB 13006 13695 -1
CDS - EFS10706.1 SF2457T_5151 creA family protein 13708 14142 -1
CDS - EFS10707.1 SF2457T_5152 right origin-binding protein 14392 15261 1
CDS - EFS10708.1 SF2457T_5153 phosphoglycerate mutase family protein 15258 15905 -1
CDS - EFS10709.1 SF2457T_5154 hypothetical protein 15933 16049 -1
CDS - EFS10710.1 SF2457T_5155 hypothetical protein 16019 16453 -1
CDS trpR EFS10711.1 SF2457T_5156 trp operon repressor 16562 16858 -1
CDS - EFS10712.1 SF2457T_5157 soluble lytic murein transglycosylase 16978 18915 -1
CDS - EFS10713.1 SF2457T_5158 ABC transporter family protein 19126 20793 1
CDS - EFS10714.1 SF2457T_5159 transcriptional regulator nadR 21101 22333 -1
CDS radA EFS10715.1 SF2457T_5160 DNA repair protein RadA 22354 23736 -1
CDS serB EFS10716.1 SF2457T_5161 phosphoserine phosphatase SerB 23785 24753 -1
CDS - EFS10717.1 SF2457T_5162 protein smp 24859 25503 1
CDS - EFS10718.1 SF2457T_5163 lipoate-protein ligase A 25531 26142 1
CDS - EFS10719.1 SF2457T_5164 lipoate-ligase A domain protein 26322 26546 1
CDS - EFS10720.1 SF2457T_5165 helix-turn-helix family protein 26578 26841 1
CDS deoD EFS10721.1 SF2457T_5166 purine nucleoside phosphorylase 27002 27721 -1
CDS deoB EFS10722.1 SF2457T_5167 phosphopentomutase 27778 29001 -1
CDS deoA EFS10723.1 SF2457T_5168 thymidine phosphorylase 29053 30375 -1
CDS deoC EFS10724.1 SF2457T_5169 deoxyribose-phosphate aldolase 30502 31281 -1
CDS - EFS10725.1 SF2457T_5170 hypothetical protein 31438 31563 -1
CDS - EFS10726.1 SF2457T_5171 uncharacterized protein yjjI 31539 33080 1
CDS - EFS10727.1 SF2457T_5172 radical SAM superfamily protein 33052 33915 1
CDS - EFS10728.1 SF2457T_5173 uncharacterized deoxyribonuclease yjjV 34129 34911 -1
CDS - EFS10729.1 SF2457T_5174 patatin-like phospholipase family protein 34908 35981 -1
CDS - EFS10730.1 SF2457T_5175 hypothetical protein 36103 36264 -1
CDS - EFS10731.1 SF2457T_5176 putative phospholipid-binding domain protein 36381 36938 -1
CDS prfC EFS10732.1 SF2457T_5177 peptide chain release factor 3 37379 38968 -1
CDS - EFS10733.1 SF2457T_5178 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 39059 39736 -1
CDS rimI EFS10734.1 SF2457T_5179 ribosomal-protein-alanine acetyltransferase 39751 40197 -1
CDS holD EFS10735.1 SF2457T_5180 DNA polymerase III, psi subunit 40166 40579 -1
CDS - EFS10736.1 SF2457T_5181 ribosomal RNA small subunit methyltransferase C 40682 41713 1
tRNA - - SF2457T_5182 tRNA-Leu 41990 42076 1
tRNA - - SF2457T_5183 tRNA-Leu 42105 42189 1
tRNA - - SF2457T_5184 tRNA-Leu 42223 42308 1
CDS - EFS10737.1 SF2457T_5185 hypothetical protein 42347 42622 -1
CDS - EFS10738.1 SF2457T_5186 ferric iron reductase protein fhuF 42724 43512 1
CDS - EFS10739.1 SF2457T_5187 transcriptional activator protein bglJ 43550 44077 -1
CDS - EFS10740.1 SF2457T_5188 bacterial regulatory s, luxR family protein 44185 44769 -1
CDS - EFS10741.1 SF2457T_5189 insertion element IS1 1/5/6 protein insB 44771 45274 -1
CDS - EFS10742.1 SF2457T_5190 IS600 ORF2 domain protein 45349 45567 1
CDS - EFS10743.1 SF2457T_5191 hypothetical protein 46092 46862 1
CDS - EFS10744.1 SF2457T_5192 yjjB protein 46853 47326 1
CDS - EFS10745.1 SF2457T_5193 primosomal protein I 47433 47972 1
CDS - EFS10746.1 SF2457T_5194 DNA replication protein dnaC 47975 48712 1
CDS - EFS10747.1 SF2457T_5195 uncharacterized protein yjjA 48764 49255 1
CDS - EFS10748.1 SF2457T_5196 phosphoglycerol transferase I 49509 51800 1
CDS - EFS10749.1 SF2457T_5197 uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN 51938 52705 -1
CDS - EFS10750.1 SF2457T_5198 uncharacterized zinc-type alcohol dehydrogenase-like yjjN domain protein 52820 52951 -1
CDS - EFS10751.1 SF2457T_5199 bacterial regulatory s, gntR family protein 53099 54013 1
CDS - EFS10752.1 SF2457T_5200 major Facilitator Superfamily protein 54228 55589 1
CDS - EFS10753.1 SF2457T_5201 methyl-accepting chemotaxis protein I 55638 57302 -1
CDS hpaR EFS10754.1 SF2457T_5202 homoprotocatechuate degradation operon regulator, HpaR 57421 57867 -1
CDS hpaG EFS10755.1 SF2457T_5203 homoprotocatechuate catabolism bifunctional isomerase/decarboxylase 58139 59428 1
CDS hpaE EFS10756.1 SF2457T_5204 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 59425 60891 1
CDS hpaD EFS10757.1 SF2457T_5205 3,4-dihydroxyphenylacetate 2,3-dioxygenase 60893 61744 1
CDS - EFS10758.1 SF2457T_5206 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 61754 62134 1
CDS hpaH EFS10759.1 SF2457T_5207 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 62202 63005 1
CDS hpaI EFS10760.1 SF2457T_5208 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 63016 63819 1
CDS hpaX EFS10761.1 SF2457T_5209 4-hydroxyphenylacetate permease 63841 65196 1
CDS hpaA EFS10762.1 SF2457T_5210 4-hydroxyphenylacetate catabolism regulatory protein HpaA 65206 66096 1
CDS - EFS10763.1 SF2457T_5211 hypothetical protein 66066 66203 1
CDS - EFS10764.1 SF2457T_5212 metallo-beta-lactamase superfamily protein 66267 67034 1
CDS - EFS10765.1 SF2457T_5213 4-hydroxyphenylacetate 3-monooxygenase oxygenase component domain protein 67287 67796 1
CDS - EFS10766.1 SF2457T_5214 4-hydroxyphenylacetate 3-monooxygenase oxygenase component 67793 68845 1
CDS hpaC EFS10767.1 SF2457T_5215 4-hydroxyphenylacetate 3-monooxygenase, reductase component 68863 69375 1
CDS - EFS10768.1 SF2457T_5216 hypothetical protein 69454 69600 1
CDS - EFS10769.1 SF2457T_5217 carbon starvation protein A 69768 71918 1
CDS - EFS10770.1 SF2457T_5218 hypothetical protein 71968 72171 1
CDS - EFS10771.1 SF2457T_5219 cobW/HypB/UreG, nucleotide-binding domain protein 72182 73138 1
CDS - EFS10772.1 SF2457T_5220 hypothetical protein 73207 73863 -1
CDS - EFS10773.1 SF2457T_5221 insertion element IS1 1/5/6 protein insB 73984 74487 -1
CDS - EFS10774.1 SF2457T_5222 IS600 ORF2 domain protein 74562 74843 1
CDS - EFS10775.1 SF2457T_5223 type III restriction enzyme, res subunit 74978 77410 1
CDS - EFS10776.1 SF2457T_5224 RNA methylase family UPF0020 family protein 77477 78946 1
CDS - EFS10777.1 SF2457T_5225 type I restriction enzyme EcoAI specificity 78946 80601 1
CDS - EFS10778.1 SF2457T_5226 hypothetical protein 80822 81163 1
CDS - EFS10779.1 SF2457T_5227 hypothetical protein 81210 81530 -1
CDS - EFS10780.1 SF2457T_5228 transposase family protein 81595 81897 1
CDS - EFS10781.1 SF2457T_5229 integrase core domain protein 82038 82751 1
CDS - EFS10782.1 SF2457T_5230 putative transposase B domain protein 82792 83373 -1
CDS rplI EFS10783.1 SF2457T_5231 ribosomal protein L9 84404 84853 -1
CDS rpsR EFS10784.1 SF2457T_5232 ribosomal protein S18 84895 85122 -1
CDS rpsF EFS10785.1 SF2457T_5233 ribosomal protein S6 85448 85819 -1
CDS - EFS10786.1 SF2457T_5234 hypothetical protein 86170 86445 1
CDS - EFS10787.1 SF2457T_5235 L-ribulose-5-phosphate 4-epimerase ulaF 86574 87260 -1
CDS - EFS10788.1 SF2457T_5236 L-ribulose-5-phosphate 3-epimerase ulaE 87260 88114 -1
CDS - EFS10789.1 SF2457T_5237 putative 3-keto-L-gulonate-6-phosphate decarboxylase 88124 88774 -1