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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS sseA ZP_05431196.1 ShiD9_010100000350 3-mercaptopyruvate sulfurtransferase 1 768 -1
CDS - ZP_05431197.1 ShiD9_010100000355 hypothetical protein 975 5936 1
CDS - ZP_05431198.1 ShiD9_010100000360 penicillin-binding protein 1C 5937 8249 1
CDS ndk ZP_05431199.1 ShiD9_010100000365 nucleoside diphosphate kinase 8398 8829 1
CDS - ZP_05431200.1 ShiD9_010100000370 hypothetical protein 8979 10133 1
CDS - ZP_05431201.1 ShiD9_010100000375 cytoskeletal protein RodZ 10418 11431 1
CDS ispG ZP_05431202.1 ShiD9_010100000380 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11458 12576 1
CDS hisS ZP_05431203.1 ShiD9_010100000385 histidyl-tRNA synthetase 12687 13961 1
CDS - ZP_05431204.1 ShiD9_010100000390 hypothetical protein 13979 14599 1
CDS - ZP_05431205.1 ShiD9_010100000395 outer membrane protein assembly complex subunit YfgL 14610 15788 1
CDS engA ZP_05431206.1 ShiD9_010100000400 GTP-binding protein EngA 15906 17378 1
CDS - ZP_05431207.1 ShiD9_010100000405 hypothetical protein 17447 17662 1
CDS xseA ZP_05431208.1 ShiD9_010100000410 exodeoxyribonuclease VII large subunit 17659 19029 -1
CDS - ZP_05431209.1 ShiD9_010100000415 inosine 5'-monophosphate dehydrogenase 19191 20657 1
CDS guaA ZP_05431210.1 ShiD9_010100000420 GMP synthase 20726 22303 1
CDS - ZP_05431211.1 ShiD9_010100000425 hypothetical protein 22398 22937 -1
CDS - ZP_05431212.1 ShiD9_010100000430 17 kDa surface antigen 22953 23468 -1
CDS - ZP_05431213.1 ShiD9_010100000435 hypothetical protein 23991 24143 1
CDS - ZP_05431214.1 ShiD9_010100000440 hypothetical protein 24325 26568 1
CDS - ZP_05431215.1 ShiD9_010100000445 exopolyphosphatase 26607 28148 -1
CDS - ZP_05431216.1 ShiD9_010100000450 polyphosphate kinase 28153 30219 -1
CDS purN ZP_05431217.1 ShiD9_010100000455 phosphoribosylglycinamide formyltransferase 30390 31028 -1
CDS - ZP_05431218.1 ShiD9_010100000460 phosphoribosylaminoimidazole synthetase 31028 32065 -1
CDS upp ZP_05431219.1 ShiD9_010100000465 uracil phosphoribosyltransferase 32390 33016 1
CDS - ZP_05431220.1 ShiD9_010100000470 uracil transporter 33102 34391 1
CDS - ZP_05431221.1 ShiD9_010100000475 DNA replication initiation factor 34441 35187 1
CDS - ZP_05431222.1 ShiD9_010100000480 predicted oxidoreductase 35325 35684 -1
CDS - ZP_05431223.1 ShiD9_010100000485 predicted peptidase 35705 37168 -1
CDS - ZP_05431224.1 ShiD9_010100000490 predicted inner membrane protein 37381 38442 1
CDS focB ZP_05431225.1 ShiD9_010100000495 putative formate transporter 38596 39327 -1
CDS - ZP_05431226.1 ShiD9_010100000500 DNA-binding transcriptional activator, formate sensing 39349 41361 -1
CDS - ZP_05431227.1 ShiD9_010100000505 putative protein processing element 41391 41804 -1
CDS - ZP_05431228.1 ShiD9_010100000510 hydrogenase 4 Fe-S subunit 41797 42030 -1
CDS - ZP_05431229.1 ShiD9_010100000515 hydrogenase 4, Fe-S subunit 42033 42554 -1
CDS - ZP_05431230.1 ShiD9_010100000520 hydrogenase 4 subunit H 42551 43096 -1
CDS - ZP_05431231.1 ShiD9_010100000525 hydrogenase 4 membrane subunit 43106 44821 -1
CDS - ZP_05431232.1 ShiD9_010100000530 hydrogenase 4 subunit F 44811 46391 -1
CDS hyfE ZP_05431233.1 ShiD9_010100000535 hydrogenase 4 membrane subunit 46396 47046 -1
CDS - ZP_05431234.1 ShiD9_010100000540 hydrogenase 4 subunit D 47058 48044 -1
CDS - ZP_05431235.1 ShiD9_010100000545 hydrogenase 4 subunit D 48041 48409 -1
CDS - ZP_05431236.1 ShiD9_010100000550 hydrogenase 4 subunit D 48385 48495 -1
CDS - ZP_05431237.1 ShiD9_010100000555 hydrogenase 4, membrane subunit 48512 49459 -1
CDS - ZP_05431238.1 ShiD9_010100000560 hydrogenase 4 subunit B 49470 50861 -1
CDS - ZP_05431239.1 ShiD9_010100000565 hydrogenase 4 subunit B 50816 51487 -1
CDS - ZP_05431240.1 ShiD9_010100000570 hydrogenase 4, 4Fe-4S subunit 51487 52104 -1
CDS bcp ZP_05431241.1 ShiD9_010100000575 thioredoxin-dependent thiol peroxidase 52357 52827 -1
CDS gcvR ZP_05431242.1 ShiD9_010100000580 glycine cleavage system transcriptional repressor 52827 53399 -1
CDS - ZP_05431243.1 ShiD9_010100000585 dihydrodipicolinate synthase 53545 54423 1
CDS - ZP_05431244.1 ShiD9_010100000590 lipoprotein 54440 55474 1
CDS - ZP_05431245.1 ShiD9_010100000595 phosphoribosylaminoimidazole-succinocarboxamide synthase 55687 56400 1
CDS - ZP_05431246.1 ShiD9_010100000600 hypothetical protein 56554 56781 1
CDS - ZP_05431247.1 ShiD9_010100000605 plasmid maintenance protein 56781 57179 1
CDS - ZP_05431248.1 ShiD9_010100000610 hypothetical protein 57326 58189 1
CDS - ZP_05431249.1 ShiD9_010100000615 putative hydrolase 58204 60219 1
CDS - ZP_05431250.1 ShiD9_010100000620 esterase YpfH 60293 60991 1
CDS - ZP_05431251.1 ShiD9_010100000625 hypothetical protein 61072 61272 -1
CDS - ZP_05431252.1 ShiD9_010100000630 succinyl-diaminopimelate desuccinylase 61300 62427 -1
CDS - ZP_05431253.1 ShiD9_010100000635 hypothetical protein 62431 62787 -1
CDS - ZP_05431254.1 ShiD9_010100000640 aminoglycoside/multidrug efflux system 63326 66439 -1
CDS - ZP_05431255.1 ShiD9_010100000645 nitrate/nitrite sensor protein NarQ 66603 68303 -1
CDS - ZP_05431256.1 ShiD9_010100000650 putative oxidoreductase Fe-S binding subunit 68509 70488 1
CDS - ZP_05431257.1 ShiD9_010100000655 putative NUDIX hydrolase 70556 71131 1
CDS - ZP_05431258.1 ShiD9_010100000660 hypothetical protein 71257 72300 1
CDS - ZP_05431259.1 ShiD9_010100000665 transketolase 72376 74379 -1
CDS - ZP_05431260.1 ShiD9_010100000670 transaldolase A 74399 75349 -1
CDS - ZP_05431261.1 ShiD9_010100000675 malic enzyme 75638 77917 1
CDS - ZP_05431262.1 ShiD9_010100000680 hypothetical protein 78210 78545 1
CDS - ZP_05431263.1 ShiD9_010100000685 putative nucleoside triphosphate hydrolase domain protein 78558 79037 1
CDS - ZP_05431264.1 ShiD9_010100000690 hypothetical protein 79012 79713 1
CDS - ZP_05431265.1 ShiD9_010100000695 putative cobalamin adenosyltransferase in ethanolamine utilization 79710 80513 1
CDS eutD ZP_05431266.1 ShiD9_010100000700 phosphotransacetylase 80510 81526 1
CDS - ZP_05431267.1 ShiD9_010100000705 predicted carboxysome structural protein, ethanolamine utilization protein 81565 81858 1
CDS - ZP_05431268.1 ShiD9_010100000710 predicted carboxysome structural protein, ethanolamine utilization protein 81965 82252 1
CDS - ZP_05431269.1 ShiD9_010100000715 predicted aldehyde dehydrogenase, ethanolamine utilization protein 82264 83667 1
CDS - ZP_05431270.1 ShiD9_010100000720 putative chaperonin, ethanolamine utilization protein 83678 84514 1
CDS - ZP_05431271.1 ShiD9_010100000725 putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome 84504 85691 1
CDS - ZP_05431272.1 ShiD9_010100000730 putative ethanolamine transporter 85808 87034 1
CDS eutA ZP_05431273.1 ShiD9_010100000735 reactivating factor for ethanolamine ammonia lyase 87031 88434 1
CDS - ZP_05431274.1 ShiD9_010100000740 ethanolamine ammonia-lyase, large subunit, heavy chain 88446 89807 1
CDS - ZP_05431275.1 ShiD9_010100000745 ethanolamine ammonia-lyase small subunit 89828 90715 1
CDS - ZP_05431276.1 ShiD9_010100000750 putative carboxysome-related structural protein with putative role in ethanolamine utilization 90725 91384 1
CDS - ZP_05431277.1 ShiD9_010100000755 predicted carboxysome structural protein with predicted role in ethanolamine utilization 91397 91897 1
CDS - ZP_05431278.1 ShiD9_010100000760 transcriptional regulator EutR 91943 92995 1
CDS - ZP_05431279.1 ShiD9_010100000765 coproporphyrinogen III oxidase 93001 93900 -1
CDS - ZP_05431280.1 ShiD9_010100000770 N-acetylmuramoyl-l-alanine amidase I 93904 94773 -1
CDS - ZP_05431281.1 ShiD9_010100000775 putative acetyltransferase 94987 95412 1
CDS - ZP_05431282.1 ShiD9_010100000780 hypothetical protein 95399 95848 1
CDS - ZP_05431283.1 ShiD9_010100000785 hypothetical protein 95909 96484 1
CDS - ZP_05431284.1 ShiD9_010100000790 hypothetical protein 96580 97479 1
CDS - ZP_05431285.1 ShiD9_010100000795 hypothetical protein 97537 98829 -1
CDS murP ZP_05431286.1 ShiD9_010100000800 N-acetylmuramic acid phosphotransfer permease 98846 100270 -1
CDS murQ ZP_05431287.1 ShiD9_010100000805 N-acetylmuramic acid-6-phosphate etherase 100274 101170 -1
CDS - ZP_05431288.1 ShiD9_010100000810 putative DNA-binding transcriptional regulator 101334 102191 1
CDS - ZP_05431289.1 ShiD9_010100000815 short chain dehydrogenase 102320 103111 1
CDS - ZP_05431290.1 ShiD9_010100000820 thiosulfate transporter subunit 103282 104298 1
CDS - ZP_05431291.1 ShiD9_010100000825 sulfate/thiosulfate transporter subunit 104298 105131 1
CDS cysW ZP_05431292.1 ShiD9_010100000830 sulfate/thiosulfate transporter permease subunit 105131 106006 1
CDS - ZP_05431293.1 ShiD9_010100000835 sulfate/thiosulfate transporter subunit 105996 107093 1
CDS cysM ZP_05431294.1 ShiD9_010100000840 cysteine synthase B 107227 108138 1
CDS - ZP_05431295.1 ShiD9_010100000845 hypothetical protein 108141 108509 -1