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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05431312.1 ShiD9_010100000938 nucleoside (except guanosine) transporter 11 1213 -1
CDS - ZP_05431313.1 ShiD9_010100000943 manganese transport protein MntH 1612 2787 1
CDS - ZP_05431314.1 ShiD9_010100000948 hypothetical protein 2928 3254 -1
CDS - ZP_05431315.1 ShiD9_010100000953 hypothetical protein 3369 4625 -1
CDS glk ZP_05431316.1 ShiD9_010100000958 glucokinase 4829 5794 1
CDS - ZP_05431317.1 ShiD9_010100000963 putative enzyme IIB component of PTS 6013 6339 1
CDS - ZP_05431318.1 ShiD9_010100000968 putative transport protein 6361 7608 1
CDS - ZP_05431319.1 ShiD9_010100000973 aminopeptidase 7623 8708 1
CDS - ZP_05431320.1 ShiD9_010100000978 exoaminopeptidase 8708 9745 1
CDS - ZP_05431321.1 ShiD9_010100000983 putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component 9770 12265 1
CDS - ZP_05431322.1 ShiD9_010100000988 predicted DNA-binding protein 12268 13125 -1
CDS - ZP_05431323.1 ShiD9_010100000993 predicted response regulator in two-component system withYpdA 13138 13872 -1
CDS - ZP_05431324.1 ShiD9_010100000998 sensor histidine kinase 13887 15566 -1
CDS - ZP_05431325.1 ShiD9_010100001003 aminotransferase 15961 17199 1
CDS - ZP_05431326.1 ShiD9_010100001008 lipid A biosynthesis palmitoleoyl acyltransferase 17691 18611 -1
CDS - ZP_05431327.1 ShiD9_010100001013 predicted inner membrane protein 18964 19206 1
CDS - ZP_05431328.1 ShiD9_010100001018 predicted lipoprotein involved in colanic acid biosynthesis 19283 19558 -1
CDS - ZP_05431329.1 ShiD9_010100001023 hypothetical protein 19854 20486 1
CDS - ZP_05431330.1 ShiD9_010100001028 formyl-coenzyme A transferase 20999 22249 1
CDS - ZP_05431331.1 ShiD9_010100001033 putative oxalyl-CoA decarboxylase 22303 23997 1
CDS - ZP_05431332.1 ShiD9_010100001038 putative transporter YfdV 24067 25011 1
CDS - ZP_05431333.1 ShiD9_010100001043 hypothetical protein 25085 26230 1
CDS - ZP_05431334.1 ShiD9_010100001048 hybrid sensory histidine kinase in two-component regulatory system with EvgA 26286 29879 -1
CDS - ZP_05431335.1 ShiD9_010100001053 DNA-binding transcriptional activator EvgA 29884 30498 -1
CDS - ZP_05431336.1 ShiD9_010100001058 multidrug resistance protein 30915 32078 1
CDS - ZP_05431337.1 ShiD9_010100001063 multidrug resistance protein 32078 33616 1
CDS - ZP_05431338.1 ShiD9_010100001068 D-serine dehydratase 33724 35052 -1
CDS - ZP_05431339.1 ShiD9_010100001073 permease DsdX 35070 35288 -1
CDS - ZP_05431340.1 ShiD9_010100001078 Sucrose operon repressor (Csc operon regulatory protein) 35531 36526 1
CDS - ZP_05431341.1 ShiD9_010100001083 Sucrose-6-phosphate hydrolase (beta-fructofuranosidase) (Sucrase) (Invertase) 36534 37967 -1
CDS - ZP_05431342.1 ShiD9_010100001088 aminoimidazole riboside kinase 38183 39097 1
CDS lacY ZP_05431343.1 ShiD9_010100001093 galactoside permease 39169 40416 1
CDS - ZP_05431344.1 ShiD9_010100001098 putative resolvase 41013 41639 -1
CDS - ZP_05431345.1 ShiD9_010100001103 hypothetical protein 41942 42118 1
CDS - ZP_05431346.1 ShiD9_010100001108 hypothetical protein 42597 43826 1
CDS - ZP_05431347.1 ShiD9_010100001113 hypothetical protein 43810 45078 1
CDS - ZP_05431348.1 ShiD9_010100001118 hypothetical protein 45785 46642 -1
CDS - ZP_05431349.1 ShiD9_010100001123 hypothetical protein 46865 47251 -1
CDS - ZP_05431350.1 ShiD9_010100001128 hypothetical protein 47248 47412 -1
CDS - ZP_05431351.1 ShiD9_010100001133 hypothetical protein 47409 47699 -1
CDS - ZP_05431352.1 ShiD9_010100001138 predicted anti-RecBCD protein 47710 48003 -1
CDS - ZP_05431353.1 ShiD9_010100001143 hypothetical protein 48027 48410 -1
CDS - ZP_05431354.1 ShiD9_010100001148 DNA single-strand annealing protein; essential recombination function protein Erf 48410 48547 -1
CDS - ZP_05431355.1 ShiD9_010100001153 replication protein P 48592 49596 1
CDS - ZP_05431356.1 ShiD9_010100001158 putative regulatory protein mnt (modular protein) 49685 49945 -1
CDS - ZP_05431357.1 ShiD9_010100001163 HNH endonuclease 50077 50586 -1
CDS - ZP_05431358.1 ShiD9_010100001168 Endo-alpha-sialidase, phage head protein 50629 52806 1
CDS - ZP_05431359.1 ShiD9_010100001173 hypothetical protein 52984 54093 -1
CDS - ZP_05431360.1 ShiD9_010100001178 putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage 54543 55700 -1
tRNA - - ShiD9_010100t01260 tRNA-Arg 55862 55936 -1
CDS - ZP_05431361.1 ShiD9_010100001183 predicted inner membrane protein 56012 56944 -1
CDS - ZP_05431362.1 ShiD9_010100001188 predicted lipoprotein 57238 57993 1
CDS - ZP_05431363.1 ShiD9_010100001193 hypothetical protein 58175 59233 -1
CDS - ZP_05431364.1 ShiD9_010100001198 long-chain fatty acid outer membrane transporter 59600 60940 -1
CDS - ZP_05431365.1 ShiD9_010100001203 hypothetical protein 61312 61596 1
CDS fadI ZP_05431366.1 ShiD9_010100001208 3-ketoacyl-CoA thiolase 61776 63086 1
CDS fadJ ZP_05431367.1 ShiD9_010100001213 multifunctional fatty acid oxidation complex subunit alpha 63086 65230 1
CDS - ZP_05431368.1 ShiD9_010100001218 phosphohistidine phosphatase 65433 65918 1
CDS - ZP_05431369.1 ShiD9_010100001223 putative fimbrial-like adhesin exported protein 66602 67165 1
CDS - ZP_05431370.1 ShiD9_010100001228 putative outer membrane usher protein yfcU precursor 67247 69889 1
CDS - ZP_05431371.1 ShiD9_010100001233 putative periplasmic pilus exported chaperone 69909 70661 1
CDS - ZP_05431372.1 ShiD9_010100001238 putative minor fimbrial subunit 70678 71184 1
CDS - ZP_05431373.1 ShiD9_010100001243 putative fimbrial protein 71181 71651 1
CDS - ZP_05431374.1 ShiD9_010100001248 putative fimbrial protein (Adhesin) 71648 72172 1
CDS - ZP_05431375.1 ShiD9_010100001253 hypothetical protein 72753 73031 1