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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05431882.1 ShiD9_010100003818 putative transposase 1 491 1
CDS - ZP_05431883.1 ShiD9_010100003823 hypothetical protein 718 966 1
CDS - ZP_05431884.1 ShiD9_010100003828 putative diguanylate cyclase 1233 2258 -1
CDS - ZP_05431885.1 ShiD9_010100003833 hypothetical protein 2441 2695 1
CDS - ZP_05431886.1 ShiD9_010100003838 hypothetical protein 2717 3064 -1
CDS - ZP_05431887.1 ShiD9_010100003843 putative transporter; MFS superfamily protein 3119 4300 -1
CDS - ZP_05431888.1 ShiD9_010100003848 putative DNA-binding transcriptional regulator 4397 5218 1
CDS - ZP_05431889.1 ShiD9_010100003853 conserved inner membrane protein 5175 5621 -1
CDS - ZP_05431890.1 ShiD9_010100003858 hypothetical protein 5791 5895 1
CDS - ZP_05431891.1 ShiD9_010100003863 hypothetical protein 5896 6399 -1
CDS - ZP_05431892.1 ShiD9_010100003868 putative diguanylate cyclase 6442 7932 -1
CDS - ZP_05431893.1 ShiD9_010100003873 putative diguanylate cyclase 8113 9588 -1
CDS - ZP_05431894.1 ShiD9_010100003878 hypothetical protein 9735 11018 -1
CDS - ZP_05431895.1 ShiD9_010100003883 conserved protein with nucleoside triphosphate hydrolase domain 11131 13065 -1
CDS - ZP_05431896.1 ShiD9_010100003888 scaffolding protein for murein synthesizing machinery 13501 14247 1
CDS - ZP_05431897.1 ShiD9_010100003893 putative oxidoreductase 14337 15191 1
CDS - ZP_05431898.1 ShiD9_010100003898 hypothetical protein 15242 16126 -1
CDS - ZP_05431899.1 ShiD9_010100003903 glyceraldehyde-3-phosphate dehydrogenase A 16210 17205 -1
CDS - ZP_05431900.1 ShiD9_010100003908 methionine sulfoxide reductase B 17547 17960 1
CDS - ZP_05431901.1 ShiD9_010100003913 hypothetical protein 18002 18274 1
CDS - ZP_05431902.1 ShiD9_010100003918 nicotinamidase/pyrazinamidase 18435 19076 -1
CDS ansA ZP_05431903.1 ShiD9_010100003923 cytoplasmic asparaginase I 19087 20103 -1
CDS - ZP_05431904.1 ShiD9_010100003928 protease 4 20270 22126 -1
CDS - ZP_05431905.1 ShiD9_010100003933 hypothetical protein 22287 22838 1
CDS - ZP_05431906.1 ShiD9_010100003938 selenophosphate synthetase 22955 23998 1
CDS - ZP_05431907.1 ShiD9_010100003943 DNA topoisomerase III 24003 25964 1
CDS - ZP_05431908.1 ShiD9_010100003948 hypothetical protein 26092 26229 1
CDS - ZP_05431909.1 ShiD9_010100003953 hypothetical protein 26247 27131 1
CDS - ZP_05431910.1 ShiD9_010100003958 glutamate dehydrogenase 27248 28591 -1
CDS - ZP_05431911.1 ShiD9_010100003963 hypothetical protein 28827 29099 1
CDS - ZP_05431912.1 ShiD9_010100003968 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 29065 29472 -1
CDS - ZP_05431913.1 ShiD9_010100003973 putative cytochrome oxidase 29559 30179 1
CDS - ZP_05431914.1 ShiD9_010100003978 rhodanese domain-containing protein 30188 31495 -1
CDS - ZP_05431915.1 ShiD9_010100003983 putative ATP-binding component of a transport system 31562 32215 -1
CDS - ZP_05431916.1 ShiD9_010100003988 fused transporter subunits of ABC superfamily: membrane components 32215 33750 -1
CDS - ZP_05431917.1 ShiD9_010100003993 putative ABC transporter solute-binding protein 33723 34889 -1
CDS - ZP_05431918.1 ShiD9_010100003998 hypothetical protein 34899 35447 -1
CDS - ZP_05431919.1 ShiD9_010100004003 conserved inner membrane protein 35447 36154 -1
CDS - ZP_05431920.1 ShiD9_010100004008 hypothetical protein 36169 36846 -1
CDS - ZP_05431921.1 ShiD9_010100004013 hypothetical protein 36851 37561 -1
CDS - ZP_05431922.1 ShiD9_010100004018 exonuclease III 37728 38534 -1
CDS - ZP_05431923.1 ShiD9_010100004023 hypothetical protein 38622 38720 1
CDS - ZP_05431924.1 ShiD9_010100004028 bifunctional succinylornithine transaminase/acetylornithine transaminase 38980 40200 1
CDS - ZP_05431925.1 ShiD9_010100004033 arginine succinyltransferase 40200 41231 1
CDS astD ZP_05431926.1 ShiD9_010100004038 succinylglutamic semialdehyde dehydrogenase 41228 42706 1
CDS - ZP_05431927.1 ShiD9_010100004043 succinylarginine dihydrolase 42703 44046 1
CDS - ZP_05431928.1 ShiD9_010100004048 succinylglutamate desuccinylase 44039 45007 1
CDS - ZP_05431929.1 ShiD9_010100004053 periplasmic protein 45337 45822 1
CDS - ZP_05431930.1 ShiD9_010100004058 hypothetical protein 46025 46600 1
CDS - ZP_05431931.1 ShiD9_010100004063 nucleotide excision repair endonuclease 46560 47447 -1
CDS nadE ZP_05431932.1 ShiD9_010100004068 NAD synthetase 47677 48504 -1
CDS - ZP_05431933.1 ShiD9_010100004073 DNA-binding transcriptional activator OsmE 48706 49044 1
CDS - ZP_05431934.1 ShiD9_010100004078 N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 49343 49663 1
CDS - ZP_05431935.1 ShiD9_010100004083 N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC 49748 51106 1
CDS - ZP_05431936.1 ShiD9_010100004088 N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 51157 51507 1
CDS - ZP_05431937.1 ShiD9_010100004093 DNA-binding transcriptional regulator ChbR 51518 52357 1
CDS - ZP_05431938.1 ShiD9_010100004098 cryptic phospho-beta-glucosidase, NAD(P)-binding protein 52462 53814 1
CDS - ZP_05431939.1 ShiD9_010100004103 hypothetical protein 53827 54585 1
CDS katE ZP_05431940.1 ShiD9_010100004108 hydroperoxidase II 54632 56893 -1
CDS - ZP_05431941.1 ShiD9_010100004113 cell division modulator 57097 57339 1
CDS - ZP_05431942.1 ShiD9_010100004118 hypothetical protein 57628 57984 1
CDS - ZP_05431943.1 ShiD9_010100004123 hypothetical protein 57994 58431 1
CDS - ZP_05431944.1 ShiD9_010100004128 putative cation-acid symporter 58435 59826 -1
CDS - ZP_05431945.1 ShiD9_010100004133 hypothetical protein 59959 60549 -1
CDS - ZP_05431946.1 ShiD9_010100004138 2-deoxyglucose-6-phosphatase 60712 61380 -1
CDS - ZP_05431947.1 ShiD9_010100004143 predicted inner membrane protein 61527 62063 1
CDS - ZP_05431948.1 ShiD9_010100004148 predicted phosphotransferase/kinase 62104 62964 -1
CDS - ZP_05431949.1 ShiD9_010100004153 hypothetical protein 63070 63360 -1
CDS - ZP_05431950.1 ShiD9_010100004158 6-phosphofructokinase 2 63461 64390 -1
CDS - ZP_05431951.1 ShiD9_010100004163 hypothetical protein 64677 65435 1
CDS - ZP_05431952.1 ShiD9_010100004168 hypothetical protein 65488 65595 -1
CDS - ZP_05431953.1 ShiD9_010100004183 threonyl-tRNA synthetase 68193 70121 1
CDS infC ZP_05431954.1 ShiD9_010100004188 translation initiation factor IF-3 70326 70667 1
CDS rpmI ZP_05431955.1 ShiD9_010100004193 50S ribosomal protein L35 70764 70961 1
CDS rplT ZP_05431956.1 ShiD9_010100004198 50S ribosomal protein L20 71014 71370 1
CDS - ZP_05431957.1 ShiD9_010100004203 phenylalanine tRNA synthetase, alpha subunit 71820 72803 1
CDS pheT ZP_05431958.1 ShiD9_010100004208 phenylalanyl-tRNA synthetase subunit beta 72818 75205 1
CDS ihfA ZP_05431959.1 ShiD9_010100004213 integration host factor subunit alpha 75210 75509 1
CDS - ZP_05431960.1 ShiD9_010100004218 vtamin B12-transporter permease 75610 76590 1
CDS btuE ZP_05431961.1 ShiD9_010100004223 putative glutathione peroxidase 76653 77204 1
CDS - ZP_05431962.1 ShiD9_010100004228 vitamin B12-transporter ATPase 77204 77953 1
CDS - ZP_05431963.1 ShiD9_010100004233 predicted lipoprotein 78031 78495 1
CDS - ZP_05431964.1 ShiD9_010100004238 hypothetical protein 78742 79455 1
CDS - ZP_05431965.1 ShiD9_010100004243 hypothetical protein 79518 80954 1
CDS - ZP_05431966.1 ShiD9_010100004248 hypothetical protein 80958 81176 -1
CDS - ZP_05431967.1 ShiD9_010100004253 phospho-2-dehydro-3-deoxyheptonate aldolase 81281 82327 -1
CDS - ZP_05431968.1 ShiD9_010100004258 hypothetical protein 82484 83317 -1
CDS - ZP_05431969.1 ShiD9_010100004263 phosphoenolpyruvate synthase 83648 86026 1
CDS - ZP_05431970.1 ShiD9_010100004268 short chain acyl-CoA synthetase 86083 87729 -1
CDS - ZP_05431971.1 ShiD9_010100004273 predicted 4Fe-4S ferredoxin-type protein 87786 88079 -1
CDS - ZP_05431972.1 ShiD9_010100004278 hypothetical protein 88076 89365 -1
CDS - ZP_05431973.1 ShiD9_010100004283 electron transfer flavoprotein subunit YdiR 89421 90359 -1
CDS - ZP_05431974.1 ShiD9_010100004288 putative electron transfer flavoprotein YdiQ 90379 91143 -1
CDS - ZP_05431975.1 ShiD9_010100004293 putative DNA-binding transcriptional regulator 91459 92370 1
CDS - ZP_05431976.1 ShiD9_010100004298 putative acyl-CoA dehydrogenase 92413 93564 -1
CDS - ZP_05431977.1 ShiD9_010100004303 short chain acyl-CoA transferase: fused alpha subunit ; beta subunit 93578 95173 -1
CDS aroD ZP_05431978.1 ShiD9_010100004308 3-dehydroquinate dehydratase 95317 96075 -1
CDS - ZP_05431979.1 ShiD9_010100004313 quinate/shikimate dehydrogenase 96106 96972 -1
CDS - ZP_05431980.1 ShiD9_010100004318 predicted transporter 96984 98249 -1
CDS - ZP_05431981.1 ShiD9_010100004323 putative transporter; MFS superfamily protein 98476 99630 -1